Search Results - "RUHL, Ilona"

Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution by Bowers, Robert M., Nayfach, Stephen, Schulz, Frederik, Jungbluth, Sean P., Ruhl, Ilona A., Sheremet, Andriy, Lee, Janey, Goudeau, Danielle, Eloe-Fadrosh, Emiley A., Stepanauskas, Ramunas, Malmstrom, Rex R., Kyrpides, Nikos C., Dunfield, Peter F., Woyke, Tanja

“…With advances in DNA sequencing and miniaturized molecular biology workflows, rapid and affordable sequencing of single-cell genomes has become a reality…”
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Seasonal Dynamics of Methanotrophic Bacteria in a Boreal Oil Sands End Pit Lake by Albakistani, Emad A, Nwosu, Felix C, Furgason, Chantel, Haupt, Evan S, Smirnova, Angela V, Verbeke, Tobin J, Lee, Eun-Suk, Kim, Joong-Jae, Chan, Amelia, Ruhl, Ilona A, Sheremet, Andriy, Rudderham, Sarah B, Lindsay, Matthew B J, Dunfield, Peter F

“…Base Mine Lake (BML) is the first full-scale demonstration end pit lake for the oil sands mining industry in Canada. We examined aerobic methanotrophic…”
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Microbial Functional Diversity Correlates with Species Diversity along a Temperature Gradient by Ruhl, Ilona A, Sheremet, Andriy, Smirnova, Angela V, Sharp, Christine E, Grasby, Stephen E, Strous, Marc, Dunfield, Peter F

“…Microbial community diversity is often correlated with physical environmental stresses like acidity, salinity, and temperature. For example, species diversity…”
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GAL08, an Uncultivated Group of Acidobacteria , Is a Dominant Bacterial Clade in a Neutral Hot Spring by Ruhl, Ilona A, Sheremet, Andriy, Furgason, Chantel C, Krause, Susanne, Bowers, Robert M, Jarett, Jessica K, Tran, Triet M, Grasby, Stephen E, Woyke, Tanja, Dunfield, Peter F

“…GAL08 are bacteria belonging to an uncultivated phylogenetic cluster within the phylum . We detected a natural population of the GAL08 clade in sediment from a…”
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Analysis of microbial communities in natural halite springs reveals a domain‐dependent relationship of species diversity to osmotic stress by Ruhl, Ilona A., Grasby, Stephen E., Haupt, Evan S., Dunfield, Peter F.

“…Summary Microbial species diversity may peak at certain optimal environmental conditions and decrease toward more extreme conditions. Indeed, bell‐shaped…”
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Feedstock variability impacts the bioconversion of sugar and lignin streams derived from corn stover by Clostridium tyrobutyricum and engineered Pseudomonas putida by Ruhl, Ilona A., Nelson, Robert S., Katahira, Rui, Kruger, Jacob S., Chen, Xiaowen, Haugen, Stefan J., Ingraham, Morgan A., Woodworth, Sean P., Alt, Hannah, Ramirez, Kelsey J., Peterson, Darren J., Ding, Ling, Laible, Philip D., Linger, Jeffrey G., Salvachúa, Davinia

“…Feedstock variability represents a challenge in lignocellulosic biorefineries, as it can influence both lignocellulose deconstruction and microbial conversion…”
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Seasonal dynamics of methanotrophic bacteria in a boreal oil sands end-pit lake by Albakistani, Emad A., Nwosu, Felix C., Furgason, Chantel, Haupt, Evan S., Smirnova, Angela V., Verbeke, Tobin J., Lee, Eun-Suk, Kim, Joong-Jae, Chan, Amelia, Ruhl, Ilona A., Sheremet, Andriy, Rudderham, Sarah B., Lindsay, Matthew J., Dunfield, Peter F.

“…Base Mine Lake (BML) is the first full-scale demonstration end pit lake for the oil sands mining industry in Canada. We examined aerobic methanotrophic…”
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GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring by Ruhl, Ilona A., Sheremet, Andriy, Furgason, Chantel C., Krause, Susanne, Bowers, Robert M., Jarett, Jessica K., Tran, Triet M., Grasby, Stephen E., Woyke, Tanja, Dunfield, Peter F.

“…GAL08 are bacteria belonging to an uncultivated phylogenetic cluster within the phylumAcidobacteria. We detected a natural population of the GAL08 clade in…”
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CopR of Sulfolobus solfataricus represents a novel class of archaeal-specific copper-responsive activators of transcription by VILLAFANE, Aramis, VOSKOBOYNIK, Yekaterina, RUHL, Ilona, SANNINO, David, MAEZATO, Yukari, BLUM, Paul, BINI, Elisabetta

“…In trace amounts, copper is essential for the function of key enzymes in prokaryotes and eukaryotes. Organisms have developed sophisticated mechanisms to…”
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Development of a thermostable β-glucuronidase-based reporter system for monitoring gene expression in hyperthermophiles by Honarbakhsh, Maryam, Villafane, Aramis A., Ruhl, Ilona, Sannino, David, Bini, Elisabetta

“…Mesophilic glucuronidases are the most widely used reporters of gene expression in plants, but unsuitable as reporters in (hyper‐)thermophiles due their…”
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Response to excess copper in the hyperthermophile Sulfolobus solfataricus strain 98/2 by Villafane, Aramis A., Voskoboynik, Yekaterina, Cuebas, Mariola, Ruhl, Ilona, Bini, Elisabetta

“…Copper is an essential micronutrient, but toxic in excess. Sulfolobus solfataricus cells have the ability to adapt to fluctuations of copper levels in their…”
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