Search Results - "Rêgo, Thais G"

Origin and Evolution of RNA-Dependent RNA Polymerase by de Farias, Savio T, Dos Santos Junior, Ariosvaldo P, Rêgo, Thais G, José, Marco V

“…RNA-dependent RNA polymerases (RdRp) are very ancient enzymes and are essential for all viruses with RNA genomes. We reconstruct the origin and evolution of…”
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Origin and evolution of the Peptidyl Transferase Center from proto-tRNAs by Farias, Sávio T., Rêgo, Thais G., José, Marco V.

“…•We tested the proposal that the Peptidyl Transferase Center (PTC) originated from proto-tRNAs.•Proto-tRNA ancestors were reconstructed.•Their sequences were…”
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tRNA Core Hypothesis for the Transition from the RNA World to the Ribonucleoprotein World by de Farias, Savio T, Rêgo, Thais G, José, Marco V

“…Herein we present the tRNA core hypothesis, which emphasizes the central role of tRNAs molecules in the origin and evolution of fundamental biological…”
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Single-cell transcriptional landscape of long non-coding RNAs orchestrating mouse heart development by Ramos, Thaís A. R., Urquiza-Zurich, Sebastián, Kim, Soo Young, Gillette, Thomas G., Hill, Joseph A., Lavandero, Sergio, do Rêgo, Thaís G., Maracaja-Coutinho, Vinicius

“…Long non-coding RNAs (lncRNAs) comprise the most representative transcriptional units of the mammalian genome. They are associated with organ development…”
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CORAZON: a web server for data normalization and unsupervised clustering based on expression profiles by Ramos, Thaís A R, Maracaja-Coutinho, Vinicius, Ortega, J Miguel, do Rêgo, Thaís G

“…Data normalization and clustering are mandatory steps in gene expression and downstream analyses, respectively. However, user-friendly implementations of these…”
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A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm by de Brito, Daniel M, Maracaja-Coutinho, Vinicius, de Farias, Savio T, Batista, Leonardo V, do Rêgo, Thaís G

“…Genomic Islands (GIs) are regions of bacterial genomes that are acquired from other organisms by the phenomenon of horizontal transfer. These regions are often…”
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Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study by Barufaldi, Bruno, Gomes, Jordy, Rego, Thais G do, Malheiros, Yuri, Filho, Telmo M Silva, Borges, Lucas R, Acciavatti, Raymond J, Surti, Suleman, Maidment, Andrew D A

“…Digital breast tomosynthesis (DBT) reconstructions introduce out-of-plane artifacts and false-tissue boundaries impacting the dense/adipose and breast outline…”
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RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction [version 2; peer review: 2 approved] by Ramos, Thaís A.R, Galindo, Nilbson R.O, Arias-Carrasco, Raúl, da Silva, Cecília F, Maracaja-Coutinho, Vinicius, do Rêgo, Thaís G

“…Non-coding RNAs (ncRNAs) are important players in the cellular regulation of organisms from different kingdoms. One of the key steps in ncRNAs research is the…”
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Evolution of transfer RNA and the origin of the translation system by de Farias, Savio T, do Rêgo, Thaís G, José, Marco V

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Predicting gene expression in T cell differentiation from histone modifications and transcription factor binding affinities by linear mixture models by Costa, Ivan G, Roider, Helge G, do Rego, Thais G, de Carvalho, Francisco de A T

“…The differentiation process from stem cells to fully differentiated cell types is controlled by the interplay of chromatin modifications and transcription…”
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Multiclass Segmentation of Breast Tissue and Suspicious Findings: A Simulation-Based Study for the Development of Self-Steering Tomosynthesis by Barufaldi, Bruno, da Nobrega, Yann N G, Carvalhal, Giulia, Teixeira, Joao P V, Silva Filho, Telmo M, do Rego, Thais G, Malheiros, Yuri, Acciavatti, Raymond J, Maidment, Andrew D A

“…In breast tomosynthesis, multiple low-dose projections are acquired in a single scanning direction over a limited angular range to produce cross-sectional…”
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RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction [version 1; peer review: 2 approved with reservations] by Ramos, Thaís A.R, Galindo, Nilbson R.O, Arias-Carrasco, Raúl, da Silva, Cecília F, Maracaja-Coutinho, Vinicius, do Rêgo, Thaís G

“…Non-coding RNAs (ncRNAs) are important players in the cellular regulation of organisms from different kingdoms. One of the key steps in ncRNAs research is the…”
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Inferring epigenetic and transcriptional regulation during blood cell development with a mixture of sparse linear models by DO REGO, Thais G, ROIDER, Helge G, DE CARVALHO, Francisco A. T, COSTA, Ivan G

“…Blood cell development is thought to be controlled by a circuit of transcription factors (TFs) and chromatin modifications that determine the cell fate through…”
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Thermo-Search: Lifestyle and Thermostability Analysis by Farias, Savio T., van der Linden, Marx G., Rêgo, Thais G., Araújo, Demétrius A.M., Bonato, Maria Christina M.

“…Thermo-search is an online web tool for the analysis of proteomes and individual proteins according to the ratio of two couplets of preferred and avoided amino…”
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Evaluating Data Representations for Object Recognition During Pick-and-Place Manipulation Tasks by Carvalho, Humberto Navarro de, Castro, Lucas Pontes, Rego, Thais G. Do, Filho, Telmo M. Silva, Barbosa, Yuri de A. M., Batista, Leonardo Vidal, Soares, Amilcar, Fonseca, Vinicius Prado Da

“…When manipulating objects, robots need to build a local and global description of the environment simultaneously. Recognizing objects and estimating their pose…”
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Information Theory-Based Detection of Noisy Bit Planes in Medical Images by De Oliveira, Hugo N., Dos Santos, Jefersson Alex, de Melo, Matheus C., do Rego, Thais G., Batista, Leonardo V.

“…Mammographic Computer-Aided Diagnosis systems are applications designed to assist radiologists in diagnosis of malignancy in mammographic findings. Most…”
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An Overview of Databases and Bioinformatics Tools for Plant Antimicrobial Peptides by Quintans, Isadora Louise Alves da Costa Ribeiro, de Araújo, João Victor Alcoforado, Rocha, Lívia Noêmia Morais, de Andrade, Annie Elisabeth Beltrão, do Rêgo, Thaís Gaudencio, Deyholos, Michael K

“…Antimicrobial Peptides (AMPs) are small, ribosomally synthesized proteins found in nearly all forms of life. In plants, AMPs play a central role in plant…”
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