Search Results - "Pylvänäinen, Joanna W."

TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines by Ershov, Dmitry, Phan, Minh-Son, Pylvänäinen, Joanna W., Rigaud, Stéphane U., Le Blanc, Laure, Charles-Orszag, Arthur, Conway, James R. W., Laine, Romain F., Roy, Nathan H., Bonazzi, Daria, Duménil, Guillaume, Jacquemet, Guillaume, Tinevez, Jean-Yves

“…TrackMate is an automated tracking software used to analyze bioimages and is distributed as a Fiji plugin. Here, we introduce a new version of TrackMate…”
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Live-cell imaging in the deep learning era by Pylvänäinen, Joanna W., Gómez-de-Mariscal, Estibaliz, Henriques, Ricardo, Jacquemet, Guillaume

“…Live imaging is a powerful tool, enabling scientists to observe living organisms in real time. In particular, when combined with fluorescence microscopy, live…”
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Harnessing artificial intelligence to reduce phototoxicity in live imaging by Gómez-de-Mariscal, Estibaliz, Del Rosario, Mario, Pylvänäinen, Joanna W, Jacquemet, Guillaume, Henriques, Ricardo

“…Fluorescence microscopy is essential for studying living cells, tissues and organisms. However, the fluorescent light that switches on fluorescent molecules…”
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CellTracksColab is a platform that enables compilation, analysis, and exploration of cell tracking data by Gómez-de-Mariscal, Estibaliz, Grobe, Hanna, Pylvänäinen, Joanna W, Xénard, Laura, Henriques, Ricardo, Tinevez, Jean-Yves, Jacquemet, Guillaume

“…In life sciences, tracking objects from movies enables researchers to quantify the behavior of single particles, organelles, bacteria, cells, and even whole…”
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Fast4DReg - fast registration of 4D microscopy datasets by Pylvänäinen, Joanna W, Laine, Romain F, Saraiva, Bruno M S, Ghimire, Sujan, Follain, Gautier, Henriques, Ricardo, Jacquemet, Guillaume

“…Unwanted sample drift is a common issue that plagues microscopy experiments, preventing accurate temporal visualization and quantification of biological…”
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UBR5 Is Coamplified with MYC in Breast Tumors and Encodes an Ubiquitin Ligase That Limits MYC-Dependent Apoptosis by Qiao, Xi, Liu, Ying, Prada, Maria Llamazares, Mohan, Aravind K, Gupta, Abhishekh, Jaiswal, Alok, Sharma, Mukund, Merisaari, Joni, Haikala, Heidi M, Talvinen, Kati, Yetukuri, Laxman, Pylvänäinen, Joanna W, Klefström, Juha, Kronqvist, Pauliina, Meinander, Annika, Aittokallio, Tero, Hietakangas, Ville, Eilers, Martin, Westermarck, Jukka

“…For maximal oncogenic activity, cellular MYC protein levels need to be tightly controlled so that they do not induce apoptosis. Here, we show how ubiquitin…”
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DL4MicEverywhere: deep learning for microscopy made flexible, shareable and reproducible by Hidalgo-Cenalmor, Iván, Pylvänäinen, Joanna W., G. Ferreira, Mariana, Russell, Craig T., Saguy, Alon, Arganda-Carreras, Ignacio, Shechtman, Yoav, Jacquemet, Guillaume, Henriques, Ricardo, Gómez-de-Mariscal, Estibaliz

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Nestin regulates prostate cancer cell invasion by influencing the localisation and functions of FAK and integrins by Hyder, Claire L, Lazaro, Glorianne, Pylvänäinen, Joanna W, Roberts, Maxwell W G, Qvarnström, Susanna M, Eriksson, John E

“…Nestin, an intermediate filament protein and marker of undifferentiated cells, is expressed in several cancers. Nestin is important for neuronal survival and…”
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The crucial role of bioimage analysts in scientific research and publication by Cimini, Beth A, Bankhead, Peter, D'Antuono, Rocco, Fazeli, Elnaz, Fernandez-Rodriguez, Julia, Fuster-Barceló, Caterina, Haase, Robert, Jambor, Helena Klara, Jones, Martin L, Jug, Florian, Klemm, Anna H, Kreshuk, Anna, Marcotti, Stefania, Martins, Gabriel G, McArdle, Sara, Miura, Kota, Muñoz-Barrutia, Arrate, Murphy, Laura C, Nelson, Michael S, Nørrelykke, Simon F, Paul-Gilloteaux, Perrine, Pengo, Thomas, Pylvänäinen, Joanna W, Pytowski, Lior, Ravera, Arianna, Reinke, Annika, Rekik, Yousr, Strambio-De-Castillia, Caterina, Thédié, Daniel, Uhlmann, Virginie, Umney, Oliver, Wiggins, Laura, Eliceiri, Kevin W

“…Bioimage analysis (BIA), a crucial discipline in biological research, overcomes the limitations of subjective analysis in microscopy through the creation and…”
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Recognising the importance and impact of Imaging Scientists: Global guidelines for establishing career paths within core facilities by Wright, Graham D., Thompson, Kerry A., Reis, Yara, Bischof, Johanna, Hockberger, Philip Edward, Itano, Michelle S., Yen, Lisa, Adelodun, Stephen Taiye, Bialy, Nikki, Brown, Claire M., Chaabane, Linda, Chew, Teng‐Leong, Chitty, Andrew I., Cordelières, Fabrice P., De Niz, Mariana, Ellenberg, Jan, Engelbrecht, Lize, Fabian‐Morales, Eunice, Fazeli, Elnaz, Fernandez‐Rodriguez, Julia, Ferrando‐May, Elisa, Fletcher, Georgina, Galloway, Graham John, Guerrero, Adan, Guimarães, Jander Matos, Jacobs, Caron A., Jayasinghe, Sachintha, Kable, Eleanor, Kitten, Gregory T, Komoto, Shinya, Ma, Xiaoxiao, Marques, Jéssica Araújo, Millis, Bryan A., Miranda, Kildare, JohnO'Toole, Peter, Olatunji, Sunday Yinka, Paina, Federica, Pollak, Cora Noemi, Prats, Clara, Pylvänäinen, Joanna W., Rahmoon, Mai Atef, Reiche, Michael A., Riches, James Douglas, Rossi, Andres Hugo, Salamero, Jean, Thiriet, Caroline, Terjung, Stefan, Vasconcelos, Aldenora dos Santos, Keppler, Antje

“…In the dynamic landscape of scientific research, imaging core facilities are vital hubs propelling collaboration and innovation at the technology development…”
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Harnessing Artificial Intelligence To Reduce Phototoxicity in Live Imaging by Gómez-de-Mariscal, Estibaliz, Del Rosario, Mario, Pylvänäinen, Joanna W, Jacquemet, Guillaume, Henriques, Ricardo

“…Fluorescence microscopy, widely used in the study of living cells, tissues, and organisms, often faces the challenge of photodamage. This is primarily caused…”
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