Search Results - "Poelen, Jorrit"

Global biotic interactions: An open infrastructure to share and analyze species-interaction datasets by Poelen, Jorrit H., Simons, James D., Mungall, Chris J.

“…An intricate network of interactions between organisms and their environment form the ecosystems that sustain life on earth. With a detailed understanding of…”
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Ten (mostly) simple rules to future‐proof trait data in ecological and evolutionary sciences by Keller, Alexander, Ankenbrand, Markus J., Bruelheide, Helge, Dekeyzer, Stefanie, Enquist, Brian J., Erfanian, Mohammad Bagher, Falster, Daniel S., Gallagher, Rachael V., Hammock, Jennifer, Kattge, Jens, Leonhardt, Sara D., Madin, Joshua S., Maitner, Brian, Neyret, Margot, Onstein, Renske E., Pearse, William D., Poelen, Jorrit H., Salguero‐Gomez, Roberto, Schneider, Florian D., Tóth, Anikó B., Penone, Caterina

“…Traits have become a crucial part of ecological and evolutionary sciences, helping researchers understand the function of an organism's morphology, physiology,…”
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Holistic understanding of contemporary ecosystems requires integration of data on domesticated, captive and cultivated organisms by Groom, Quentin, Adriaens, Tim, Bertolino, Sandro, Phelps, Kendra, Poelen, Jorrit H, Reeder, DeeAnn Marie, Richardson, David M, Simmons, Nancy B, Upham, Nathan

“…Domestic and captive animals and cultivated plants should be recognised as integral components in contemporary ecosystems. They interact with wild organisms…”
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Signing data citations enables data verification and citation persistence by Elliott, Michael J., Poelen, Jorrit H., Fortes, José A. B.

“…Commonly used data citation practices rely on unverifiable retrieval methods which are susceptible to content drift, which occurs when the data associated with…”
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Liberating host–virus knowledge from biological dark data by Upham, Nathan S, Poelen, Jorrit H, Paul, Deborah, Groom, Quentin J, Simmons, Nancy B, Vanhove, Maarten P M, Bertolino, Sandro, Reeder, DeeAnn M, Bastos-Silveira, Cristiane, Sen, Atriya, Sterner, Beckett, Franz, Nico M, Guidoti, Marcus, Penev, Lyubomir, Agosti, Donat

“…Connecting basic data about bats and other potential hosts of SARS-CoV-2 with their ecological context is crucial to the understanding of the emergence and…”
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20 GB in 10 minutes: a case for linking major biodiversity databases using an open socio-technical infrastructure and a pragmatic, cross-institutional collaboration by Thessen, Anne E, Poelen, Jorrit H, Collins, Matthew, Hammock, Jen

“…Biodiversity information is made available through numerous databases that each have their own data models, web services, and data types. Combining data across…”
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Building a community-based taxonomic resource for digitization of parasites and their hosts by Sullivan, Kathryn A., Tucker, Erika M., Dowdy, Nicolas J., Allen, Julie M., Barve, Vijay, Boone, James H., Bush, Sarah E., Evenhuis, Neal L., Hastriter, Michael, Light, Jessica E., Mayfield-Meyer, Teresa, OConnor, Barry M., Poelen, Jorrit H., Racz, Gabor R., Seltmann, Katja C., Zaspel, Jennifer M.

“…Classification of the biological diversity on Earth is foundational to all areas of research within the natural sciences. Reliable biological nomenclatural and…”
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Publisher Correction: Open Science principles for accelerating trait-based science across the Tree of Life by Gallagher, Rachael V., Falster, Daniel S., Maitner, Brian S., Salguero-Gómez, Roberto, Vandvik, Vigdis, Pearse, William D., Schneider, Florian D., Kattge, Jens, Poelen, Jorrit H., Madin, Joshua S., Ankenbrand, Markus J., Penone, Caterina, Feng, Xiao, Adams, Vanessa M., Alroy, John, Andrew, Samuel C., Balk, Meghan A., Bland, Lucie M., Boyle, Brad L., Bravo-Avila, Catherine H., Brennan, Ian, Carthey, Alexandra J. R., Catullo, Renee, Cavazos, Brittany R., Conde, Dalia A., Chown, Steven L., Fadrique, Belen, Gibb, Heloise, Halbritter, Aud H., Hammock, Jennifer, Hogan, J. Aaron, Holewa, Hamish, Hope, Michael, Iversen, Colleen M., Jochum, Malte, Kearney, Michael, Keller, Alexander, Mabee, Paula, Manning, Peter, McCormack, Luke, Michaletz, Sean T., Park, Daniel S., Perez, Timothy M., Pineda-Munoz, Silvia, Ray, Courtenay A., Rossetto, Maurizio, Sauquet, Hervé, Sparrow, Benjamin, Spasojevic, Marko J., Telford, Richard J., Tobias, Joseph A., Violle, Cyrille, Walls, Ramona, Weiss, Katherine C. B., Westoby, Mark, Wright, Ian J., Enquist, Brian J.

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Why we need a centralized repository for isotopic data by Pauli, Jonathan N., Newsome, Seth D., Cook, Joseph A., Harrod, Chris, Steffan, Shawn A., Baker, Christopher J. O., Ben-David, Merav, Bloom, David, Bowen, Gabriel J., Cerling, Thure E., Cicero, Carla, Cook, Craig, Dohm, Michelle, Dharampal, Prarthana S., Graves, Gary, Gropp, Robert, Hobson, Keith A., Jordan, Chris, MacFadden, Bruce, Birch, Suzanne Pilaar, Poelen, Jorrit, Ratnasingham, Sujeevan, Russell, Laura, Stricker, Craig A., Uhen, Mark D., Yarnes, Christopher T., Hayden, Brian

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Toward reliable biodiversity dataset references by Elliott, Michael J., Poelen, Jorrit H., Fortes, José A.B.

“…No systematic approach has yet been adopted to reliably reference and provide access to digital biodiversity datasets. Based on accumulated evidence, we argue…”
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Open Science principles for accelerating trait-based science across the Tree of Life by Gallagher, Rachael V., Falster, Daniel S., Maitner, Brian S., Salguero-Gómez, Roberto, Vandvik, Vigdis, Pearse, William D., Schneider, Florian D., Kattge, Jens, Poelen, Jorrit H., Madin, Joshua S., Ankenbrand, Markus J., Penone, Caterina, Feng, Xiao, Adams, Vanessa M., Alroy, John, Andrew, Samuel C., Balk, Meghan A., Bland, Lucie M., Boyle, Brad L., Bravo-Avila, Catherine H., Brennan, Ian, Carthey, Alexandra J. R., Catullo, Renee, Cavazos, Brittany R., Conde, Dalia A., Chown, Steven L., Fadrique, Belen, Gibb, Heloise, Halbritter, Aud H., Hammock, Jennifer, Hogan, J. Aaron, Holewa, Hamish, Hope, Michael, Iversen, Colleen M., Jochum, Malte, Kearney, Michael, Keller, Alexander, Mabee, Paula, Manning, Peter, McCormack, Luke, Michaletz, Sean T., Park, Daniel S., Perez, Timothy M., Pineda-Munoz, Silvia, Ray, Courtenay A., Rossetto, Maurizio, Sauquet, Hervé, Sparrow, Benjamin, Spasojevic, Marko J., Telford, Richard J., Tobias, Joseph A., Violle, Cyrille, Walls, Ramona, Weiss, Katherine C. B., Westoby, Mark, Wright, Ian J., Enquist, Brian J.

“…Synthesizing trait observations and knowledge across the Tree of Life remains a grand challenge for biodiversity science. Species traits are widely used in…”
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The Bari Manifesto: An interoperability framework for essential biodiversity variables by Hardisty, Alex R., Michener, William K., Agosti, Donat, Alonso García, Enrique, Bastin, Lucy, Belbin, Lee, Bowser, Anne, Buttigieg, Pier Luigi, Canhos, Dora A.L., Egloff, Willi, De Giovanni, Renato, Figueira, Rui, Groom, Quentin, Guralnick, Robert P., Hobern, Donald, Hugo, Wim, Koureas, Dimitris, Ji, Liqiang, Los, Wouter, Manuel, Jeffrey, Manset, David, Poelen, Jorrit, Saarenmaa, Hannu, Schigel, Dmitry, Uhlir, Paul F., Kissling, W. Daniel

“…Essential Biodiversity Variables (EBV) are fundamental variables that can be used for assessing biodiversity change over time, for determining adherence to…”
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Building bridges between global information systems on marine organisms and ecosystem models by Grüss, Arnaud, Palomares, Maria L.D., Poelen, Jorrit H., Barile, Josephine R., Aldemita, Casey D., Ortiz, Shelumiel R., Barrier, Nicolas, Shin, Yunne-Jai, Simons, James, Pauly, Daniel

“…•We designed a web application providing parameter values to OSMOSE ecosystem models.•These parameter values are derived from data from FishBase and…”
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Opinion: Why we need a centralized repository for isotopic data by Pauli, Jonathan N, Newsome, Seth D, Cook, Joseph A, Harrod, Chris, Steffan, Shawn A, Baker, Christopher J O, Ben-David, Merav, Bloom, David, Bowen, Gabriel J, Cerling, Thure E, Cicero, Carla, Cook, Craig, Dohm, Michelle, Dharampal, Prarthana S, Graves, Gary, Gropp, Robert, Hobson, Keith A, Jordan, Chris, MacFadden, Bruce, Pilaar Birch, Suzanne, Poelen, Jorrit, Ratnasingham, Sujeevan, Russell, Laura, Stricker, Craig A, Uhen, Mark D, Yarnes, Christopher T, Hayden, Brian

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Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data by Kuhn, Tobias, Banda, Juan M., Willighagen, Egon, Ehrhart, Friederike, Evelo, Chris, Malas, Tareq B., Dumontier, Michel, Merono-Penuela, Albert, Malic, Alexander, Poelen, Jorrit H., Hurlbert, Allen H., Centeno Ortiz, Emilio, Furlong, Laura I., Queralt-Rosinach, Nuria, Chichester, Christine

“…Nanopublications are a Linked Data format for scholarly data publishing that has received considerable uptake in the last few years. In contrast to the common…”
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Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data by Kuhn, Tobias, Meroño-Peñuela, Albert, Malic, Alexander, Poelen, Jorrit H, Hurlbert, Allen H, Ortiz, Emilio Centeno, Furlong, Laura I, Queralt-Rosinach, Núria, Chichester, Christine, Banda, Juan M, Willighagen, Egon, Ehrhart, Friederike, Evelo, Chris, Malas, Tareq B, Dumontier, Michel

“…In Proceedings of IEEE eScience 2018 Nanopublications are a Linked Data format for scholarly data publishing that has received considerable uptake in the last…”
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