Search Results - "Perilla, A"

Dynamic regulation of Zn(II) sequestration by calgranulin C by Wang, Qian, Kuci, Deniz, Bhattacharya, Shibani, Hadden‐Perilla, Jodi A., Gupta, Rupal

“…Calgranulin C performs antimicrobial activity in the human immune response by sequestering Zn(II). This biological function is afforded with the aid of two…”
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Whole-exome sequencing of cell-free DNA and circulating tumor cells in multiple myeloma by Manier, S., Park, J., Capelletti, M., Bustoros, M., Freeman, S. S., Ha, G., Rhoades, J., Liu, C. J., Huynh, D., Reed, S. C., Gydush, G., Salem, K. Z., Rotem, D., Freymond, C., Yosef, A., Perilla-Glen, A., Garderet, L., Van Allen, E. M., Kumar, S., Love, J. C., Getz, G., Adalsteinsson, V. A., Ghobrial, I. M.

“…Liquid biopsies including circulating tumor cells (CTCs) and cell-free DNA (cfDNA) have enabled minimally invasive characterization of many cancers, but are…”
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Including the Teaching of Empathy and Emotional Intelligence in Medical Education Curriculum: Imperative yet Challenging by Leguízamo-Isaza, Juan M., Campaña-Perilla, Laura A., Moreno-Sarmiento, Ángela P.

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All-Atom MD Simulations of the HBV Capsid Complexed with AT130 Reveal Secondary and Tertiary Structural Changes and Mechanisms of Allostery by Pérez-Segura, Carolina, Goh, Boon Chong, Hadden-Perilla, Jodi A

“…The hepatitis B virus (HBV) capsid is an attractive drug target, relevant to combating viral hepatitis as a major public health concern. Among small molecules…”
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The Integrity of the Intradimer Interface of the Hepatitis B Virus Capsid Protein Dimer Regulates Capsid Self-Assembly by Zhao, Zhongchao, Wang, Joseph Che-Yen, Segura, Carolina Pérez, Hadden-Perilla, Jodi A, Zlotnick, Adam

“…During the hepatitis B virus lifecycle, 120 copies of homodimeric capsid protein assemble around a copy of reverse transcriptase and viral RNA and go on to…”
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Herlyn–Werner–Wunderlich syndrome: value of 3D ultrasound, 3D sonovaginography and virtual navigation in diagnosis of Müllerian malformations by Perilla, A. B., Dardes, R. d. C. M., Nunes, M. G., Araujo Júnior, E., Werner, H., Ribeiro, G., Castro, P. T., Takano, C. C., Cossi, P. S., Schor, E.

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Re: formal mentorship in Canadian radiology residency programmes by Leguízamo-Isaza, J.M., Campaña Perilla, L.A., Duarte Vallejo, A., Romero Enciso, J.A.

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Experimental Characterization of the Hepatitis B Virus Capsid Dynamics by Solid-State NMR by Malär, Alexander A, Callon, Morgane, Smith, Albert A, Wang, Shishan, Lecoq, Lauriane, Pérez-Segura, Carolina, Hadden-Perilla, Jodi A, Böckmann, Anja, Meier, Beat H

“…Protein plasticity and dynamics are important aspects of their function. Here we use solid-state NMR to experimentally characterize the dynamics of the 3.5 MDa…”
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Mandibular and temporomandibular morphologic characteristics of patients with suspected unilateral condylar hyperplasia: a CT study by López, Diego Fernando, Botero, Juliana Ruiz, Muñoz, Juan M, Cardenas-Perilla, Rodrigo A

“…Facial asymmetry associated with unilateral condylar hyperplasia (UCH) is a complicated clinical condition. The objective of this study was to describe…”
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Computational structural biology: Evolution of the field by Hadden-Perilla, Jodi A., Perilla, Juan R.

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Multiscale Modeling of Hepatitis B Virus Capsid Assembly and Its Dimorphism by Mohajerani, Farzaneh, Tyukodi, Botond, Schlicksup, Christopher J., Hadden-Perilla, Jodi A., Zlotnick, Adam, Hagan, Michael F.

“…Hepatitis B virus (HBV) is an endemic, chronic virus that leads to 800000 deaths per year. Central to the HBV lifecycle, the viral core has a protein capsid…”
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AMBERff at Scale: Multimillion-Atom Simulations with AMBER Force Fields in NAMD by Antolínez, Santiago, Jones, Peter Eugene, Phillips, James C., Hadden-Perilla, Jodi A.

“…All-atom molecular dynamics (MD) simulations are an essential structural biology technique with increasing application to multimillion-atom systems, including…”
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Re: Matthias Boschheidgen, Peter Albers, Heinz-Peter Schlemmer, et al. Multiparametric Magnetic Resonance Imaging in Prostate Cancer Screening at the Age of 45 Years: Results from the First Screening Round of the PROBASE Trial. Eur Urol 2024;85:105–11 by Cardona Ortegón, José D., Campaña Perilla, Laura A., Olarte Bermúdez, Laura M.

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Structure of the Hepatitis B virus capsid quasi-6-fold with a trapped C-terminal domain reveals capsid movements associated with domain exit by Kim, Christine, Schlicksup, Christopher J., Pérez-Segura, Carolina, Hadden-Perilla, Jodi A., Wang, Joseph Che-Yen, Zlotnick, Adam

“…Many viruses undergo transient conformational change to surveil their environments for receptors and host factors. In Hepatitis B virus (HBV) infection, after…”
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Integrating 19F Distance Restraints for Accurate Protein Structure Determination by Magic Angle Spinning NMR Spectroscopy by Runge, Brent R., Zadorozhnyi, Roman, Quinn, Caitlin M., Russell, Ryan W., Lu, Manman, Antolínez, Santiago, Struppe, Jochem, Schwieters, Charles D., Byeon, In-Ja L., Hadden-Perilla, Jodi A., Gronenborn, Angela M., Polenova, Tatyana

“…Traditional protein structure determination by magic angle spinning (MAS) solid-state NMR spectroscopy primarily relies on interatomic distances up to 8 Å,…”
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Integrating 19 F Distance Restraints for Accurate Protein Structure Determination by Magic Angle Spinning NMR Spectroscopy by Runge, Brent R, Zadorozhnyi, Roman, Quinn, Caitlin M, Russell, Ryan W, Lu, Manman, Antolínez, Santiago, Struppe, Jochem, Schwieters, Charles D, Byeon, In-Ja L, Hadden-Perilla, Jodi A, Gronenborn, Angela M, Polenova, Tatyana

“…Traditional protein structure determination by magic angle spinning (MAS) solid-state NMR spectroscopy primarily relies on interatomic distances up to 8 Å,…”
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Subset of Fluorophores Is Responsible for Radiation Brightening in Viromimetic Particles by Anil Sushma, Arathi, Zhao, Bingqing, Tsvetkova, Irina B, Pérez-Segura, Carolina, Hadden-Perilla, Jodi A, Reilly, James P, Dragnea, Bogdan

“…In certain conditions, dye-conjugated icosahedral virus shells exhibit suppression of concentration quenching. The recently observed radiation brightening at…”
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High-Performance Analysis of Biomolecular Containers to Measure Small-Molecule Transport, Transbilayer Lipid Diffusion, and Protein Cavities by Bryer, Alexander J, Hadden-Perilla, Jodi A, Stone, John E, Perilla, Juan R

“…Compartmentalization is a central theme in biology. Cells are composed of numerous membrane-enclosed structures, evolved to facilitate specific biochemical…”
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Molecular dynamics of the viral life cycle: progress and prospects by Jones, Peter Eugene, Pérez-Segura, Carolina, Bryer, Alexander J, Perilla, Juan R, Hadden-Perilla, Jodi A

“…•Molecular dynamics simulations are the central technique uniting the field of computational virology.•Viruses responsible for recent epidemics and pandemics…”
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Integrative structural biology of HIV-1 capsid protein assemblies: combining experiment and computation by Perilla, Juan R, Hadden-Perilla, Jodi A, Gronenborn, Angela M, Polenova, Tatyana

“…[Display omitted] •Integration of experiment and computation is a powerful means in structural biology.•Integrative approaches enabled the first atomic…”
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