Search Results - "Perelson, Alan"
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Mechanistic Modeling of SARS‐CoV‐2 and Other Infectious Diseases and the Effects of Therapeutics
Published in Clinical pharmacology and therapeutics (01-04-2021)“…Modern viral kinetic modeling and its application to therapeutics is a field that attracted the attention of the medical, pharmaceutical, and modeling…”
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Post-treatment control of HIV infection
Published in Proceedings of the National Academy of Sciences - PNAS (28-04-2015)“…Antiretroviral therapy (ART) for HIV is not a cure. However, recent studies suggest that ART, initiated early during primary infection, may induce…”
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Modeling latently infected cell activation: viral and latent reservoir persistence, and viral blips in HIV-infected patients on potent therapy
Published in PLoS computational biology (01-10-2009)“…Although potent combination therapy is usually able to suppress plasma viral loads in HIV-1 patients to below the detection limit of conventional clinical…”
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Mathematical modeling of within‐host Zika virus dynamics
Published in Immunological reviews (01-09-2018)“…Summary Recent Zika virus outbreaks have been associated with severe outcomes, especially during pregnancy. A great deal of effort has been put toward…”
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Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action
Published in PLoS computational biology (01-03-2021)“…Repurposed drugs that are safe and immediately available constitute a first line of defense against new viral infections. Despite limited antiviral activity…”
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In vivo kinetics of SARS-CoV-2 infection and its relationship with a person’s infectiousness
Published in Proceedings of the National Academy of Sciences - PNAS (07-12-2021)“…The within-host viral kinetics of SARS-CoV-2 infection and how they relate to a person’s infectiousness are not well understood. This limits our ability to…”
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Modeling the within-host dynamics of HIV infection
Published in BMC biology (03-09-2013)“…The new field of viral dynamics, based on within-host modeling of viral infections, began with models of human immunodeficiency virus (HIV), but now includes…”
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Regulation of T cell expansion by antigen presentation dynamics
Published in Proceedings of the National Academy of Sciences - PNAS (26-03-2019)“…An essential feature of the adaptive immune system is the proliferation of antigen-specific lymphocytes during an immune reaction to form a large pool of…”
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Modeling within-host dynamics of influenza virus infection including immune responses
Published in PLoS computational biology (01-06-2012)“…Influenza virus infection remains a public health problem worldwide. The mechanisms underlying viral control during an uncomplicated influenza virus infection…”
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Quantifying T lymphocyte turnover
Published in Journal of theoretical biology (21-06-2013)“…Peripheral T cell populations are maintained by production of naive T cells in the thymus, clonal expansion of activated cells, cellular self-renewal (or…”
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Modelling hepatitis C therapy—predicting effects of treatment
Published in Nature reviews. Gastroenterology & hepatology (01-08-2015)“…Key Points After patients receive therapy for HCV infection, HCV RNA declines in a biphasic manner, the first phase reflects viral clearance, the second phase…”
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Competitive exclusion by autologous antibodies can prevent broad HIV-1 antibodies from arising
Published in Proceedings of the National Academy of Sciences - PNAS (15-09-2015)“…The past decade has seen the discovery of numerous broad and potent monoclonal antibodies against HIV type 1 (HIV-1). Eliciting these antibodies via…”
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How robust are estimates of key parameters in standard viral dynamic models?
Published in PLoS computational biology (01-04-2024)“…Mathematical models of viral infection have been developed, fitted to data, and provide insight into disease pathogenesis for multiple agents that cause…”
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Modeling resistance to the broadly neutralizing antibody PGT121 in people living with HIV-1
Published in PLoS computational biology (29-03-2024)“…PGT121 is a broadly neutralizing antibody in clinical development for the treatment and prevention of HIV-1 infection via passive administration. PGT121…”
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Impact of different oseltamivir regimens on treating influenza A virus infection and resistance emergence: insights from a modelling study
Published in PLoS computational biology (01-04-2014)“…Several studies have proven oseltamivir to be efficient in reducing influenza viral titer and symptom intensity. However, the usefulness of oseltamivir can be…”
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Residual Viremia in Treated HIV+ Individuals
Published in PLoS computational biology (01-01-2016)“…Antiretroviral therapy (ART) effectively controls HIV infection, suppressing HIV viral loads. However, some residual virus remains, below the level of…”
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On Identifiability of Nonlinear ODE Models and Applications in Viral Dynamics
Published in SIAM review (01-01-2011)“…Ordinary differential equations (ODEs) are a powerful tool for modeling dynamic processes with wide applications in a variety of scientific fields. Over the…”
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Rapid emergence of protease inhibitor resistance in hepatitis C virus
Published in Science translational medicine (05-05-2010)“…About 170 million people worldwide are infected with hepatitis C virus (HCV). The current standard therapy leads to sustained viral elimination in only…”
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Persistent HIV-1 replication is associated with lower antiretroviral drug concentrations in lymphatic tissues
Published in Proceedings of the National Academy of Sciences - PNAS (11-02-2014)“…Antiretroviral therapy can reduce HIV-1 to undetectable levels in peripheral blood, but the effectiveness of treatment in suppressing replication in lymphoid…”
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Predictions of time to HIV viral rebound following ART suspension that incorporate personal biomarkers
Published in PLoS computational biology (01-07-2019)“…Antiretroviral therapy (ART) effectively controls HIV infection, suppressing HIV viral loads. Suspension of therapy is followed by rebound of viral loads to…”
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