Search Results - "Pereira, Fátima C"

Microbial nutrient niches in the gut by Pereira, Fátima C., Berry, David

“…Summary The composition and function of the mammalian gut microbiota has been the subject of much research in recent years, but the principles underlying the…”
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Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization by Pereira, Fátima C., Wasmund, Kenneth, Cobankovic, Iva, Jehmlich, Nico, Herbold, Craig W., Lee, Kang Soo, Sziranyi, Barbara, Vesely, Cornelia, Decker, Thomas, Stocker, Roman, Warth, Benedikt, von Bergen, Martin, Wagner, Michael, Berry, David

“…Many intestinal pathogens, including Clostridioides difficile , use mucus-derived sugars as crucial nutrients in the gut. Commensals that compete with…”
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Genome-wide analysis of cell type-specific gene transcription during spore formation in Clostridium difficile by Saujet, Laure, Pereira, Fátima C, Serrano, Monica, Soutourina, Olga, Monot, Marc, Shelyakin, Pavel V, Gelfand, Mikhail S, Dupuy, Bruno, Henriques, Adriano O, Martin-Verstraete, Isabelle

“…Clostridium difficile, a Gram positive, anaerobic, spore-forming bacterium is an emergent pathogen and the most common cause of nosocomial diarrhea. Although…”
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions by Lee, Kang Soo, Pereira, Fátima C., Palatinszky, Márton, Behrendt, Lars, Alcolombri, Uria, Berry, David, Wagner, Michael, Stocker, Roman

“…Stable isotope labeling of microbial taxa of interest and their sorting provide an efficient and direct way to answer the question “who does what?” in complex…”
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The spore differentiation pathway in the enteric pathogen Clostridium difficile by Pereira, Fátima C, Saujet, Laure, Tomé, Ana R, Serrano, Mónica, Monot, Marc, Couture-Tosi, Evelyne, Martin-Verstraete, Isabelle, Dupuy, Bruno, Henriques, Adriano O

“…Endosporulation is an ancient bacterial developmental program that culminates with the differentiation of a highly resistant endospore. In the model organism…”
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Adaptive Strategies and Pathogenesis of Clostridium difficile from In Vivo Transcriptomics by Janoir, Claire, Denève, Cécile, Bouttier, Sylvie, Barbut, Frédéric, Hoys, Sandra, Caleechum, Laxmee, Chapetón-Montes, Diana, Pereira, Fátima C., Henriques, Adriano O., Collignon, Anne, Monot, Marc, Dupuy, Bruno

“…Author Correction ( vol. 82 , p. 914 ) Classifications Services IAI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike…”
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An automated Raman-based platform for the sorting of live cells by functional properties by Lee, Kang Soo, Palatinszky, Márton, Pereira, Fátima C., Nguyen, Jen, Fernandez, Vicente I., Mueller, Anna J., Menolascina, Filippo, Daims, Holger, Berry, David, Wagner, Michael, Stocker, Roman

“…Stable-isotope probing is widely used to study the function of microbial taxa in their natural environment, but sorting of isotopically labelled microbial…”
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SRS-FISH: A high-throughput platform linking microbiome metabolism to identity at the single-cell level by Ge, Xiaowei, Pereira, Fátima C, Mitteregger, Matthias, Berry, David, Zhang, Meng, Hausmann, Bela, Zhang, Jing, Schintlmeister, Arno, Wagner, Michael, Cheng, Ji-Xin

“…One of the biggest challenges in microbiome research in environmental and medical samples is to better understand functional properties of microbial community…”
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Differential Modulation of the European Sea Bass Gut Microbiota by Distinct Insect Meals by Rangel, Fábio, Enes, Paula, Gasco, Laura, Gai, Francesco, Hausmann, Bela, Berry, David, Oliva-Teles, Aires, Serra, Claudia R, Pereira, Fátima C

“…The aquaculture industry is one of the fastest-growing sectors in animal food production. However, farming of carnivorous fish strongly relies on the use of…”
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The SpoIIQ‐SpoIIIAH complex of Clostridium difficile controls forespore engulfment and late stages of gene expression and spore morphogenesis by Serrano, Mónica, Crawshaw, Adam D., Dembek, Marcin, Monteiro, João M., Pereira, Fátima C., Pinho, Mariana Gomes, Fairweather, Neil F., Salgado, Paula S., Henriques, Adriano O.

“…Summary Engulfment of the forespore by the mother cell is a universal feature of endosporulation. In Bacillus subtilis, the forespore protein SpoIIQ and the…”
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A Recombination Directionality Factor Controls the Cell Type-Specific Activation of σK and the Fidelity of Spore Development in Clostridium difficile by Serrano, Mónica, Kint, Nicolas, Pereira, Fátima C, Saujet, Laure, Boudry, Pierre, Dupuy, Bruno, Henriques, Adriano O, Martin-Verstraete, Isabelle

“…The strict anaerobe Clostridium difficile is the most common cause of nosocomial diarrhea, and the oxygen-resistant spores that it forms have a central role in…”
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Microbial nitrogen limitation in the mammalian large intestine by Reese, Aspen T., Pereira, Fátima C., Schintlmeister, Arno, Berry, David, Wagner, Michael, Hale, Laura P., Wu, Anchi, Jiang, Sharon, Durand, Heather K., Zhou, Xiyou, Premont, Richard T., Diehl, Anna Mae, O’Connell, Thomas M., Alberts, Susan C., Kartzinel, Tyler R., Pringle, Robert M., Dunn, Robert R., Wright, Justin P., David, Lawrence A.

“…Resource limitation is a fundamental factor governing the composition and function of ecological communities. However, the role of resource supply in…”
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Allspice and Clove As Source of Triterpene Acids Activating the G Protein-Coupled Bile Acid Receptor TGR5 by Ladurner, Angela, Zehl, Martin, Grienke, Ulrike, Hofstadler, Christoph, Faur, Nadina, Pereira, Fátima C, Berry, David, Dirsch, Verena M, Rollinger, Judith M

“…Worldwide, metabolic diseases such as obesity and type 2 diabetes have reached epidemic proportions. A major regulator of metabolic processes that gained…”
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Mid-Infrared Photothermal–Fluorescence In Situ Hybridization for Functional Analysis and Genetic Identification of Single Cells by Bai, Yeran, Guo, Zhongyue, Pereira, Fátima C., Wagner, Michael, Cheng, Ji-Xin

“…Simultaneous identification and metabolic analysis of microbes with single-cell resolution and high throughput are necessary to answer the question of “who…”
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The regulatory network controlling spore formation in Clostridium difficile by Saujet, Laure, Pereira, Fátima C., Henriques, Adriano O., Martin-Verstraete, Isabelle

“…Abstract Clostridium difficile, a Gram-positive, anaerobic, spore-forming bacterium, is a major cause of nosocomial infections such as antibiotic-associated…”
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Nutrient niche specificity for glycosaminoglycans is reflected in polysaccharide utilization locus architecture of gut Bacteroides species by Overbeeke, Annelieke, Hausmann, Bela, Nikolov, Georgi, Pereira, Fatima C, Herbold, Craig W, Berry, David

“…Glycosaminoglycans (GAGs) present in the mucosal layer can be used as nutrients by certain intestinal bacteria, particularly members of the Bacteroides. GAG…”
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A Recombination Directionality Factor Controls the Cell Type-Specific Activation of [sigma] K and the Fidelity of Spore Development in Clostridium difficile by Serrano, Mónica, Kint, Nicolas, Pereira, Fátima C, Saujet, Laure, Boudry, Pierre, Dupuy, Bruno, Henriques, Adriano O, Martin-Verstraete, Isabelle

“…The strict anaerobe Clostridium difficile is the most common cause of nosocomial diarrhea, and the oxygen-resistant spores that it forms have a central role in…”
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MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data by Lee, Kang Soo, Landry, Zachary, Athar, Awais, Alcolombri, Uria, Pramoj Na Ayutthaya, Pratchaya, Berry, David, de Bettignies, Philippe, Cheng, Ji-Xin, Csucs, Gabor, Cui, Li, Deckert, Volker, Dieing, Thomas, Dionne, Jennifer, Doskocil, Ondrej, D’Souza, Glen, García-Timermans, Cristina, Gierlinger, Notburga, Goda, Keisuke, Hatzenpichler, Roland, Henshaw, Richard J., Huang, Wei E., Iermak, Ievgeniia, Ivleva, Natalia P., Kneipp, Janina, Kubryk, Patrick, Küsel, Kirsten, Lee, Tae Kwon, Lee, Sung Sik, Ma, Bo, Martínez-Pérez, Clara, Matousek, Pavel, Meckenstock, Rainer U., Min, Wei, Mojzeš, Peter, Müller, Oliver, Kumar, Naresh, Nielsen, Per Halkjær, Notingher, Ioan, Palatinszky, Márton, Pereira, Fátima C., Pezzotti, Giuseppe, Pilat, Zdenek, Plesinger, Filip, Popp, Jürgen, Probst, Alexander J., Riva, Alessandra, Saleh, Amr. A. E., Samek, Ota, Sapers, Haley M., Schubert, Olga T., Stubbusch, Astrid K. M., Tadesse, Loza F., Taylor, Gordon T., Wagner, Michael, Wang, Jing, Yin, Huabing, Yue, Yang, Zenobi, Renato, Zini, Jacopo, Sarkans, Ugis, Stocker, Roman

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The snake venom metalloproteinase BaP1 induces joint hypernociception through TNF‐α and PGE2‐dependent mechanisms by Fernandes, C M, Fátima Pereira Teixeira, C, Leite, A C R M, Gutiérrez, J M, Rocha, F A C

“…Background and purpose: Matrix metalloproteinases (MMPs) have been implicated in joint tissue destruction in arthritis. However, MMPs have not been assigned a…”
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Genome-Wide Analysis of Cell Type-Specific Gene Transcription during Spore Formation in Clostridium difficile: e1003756 by Saujet, Laure, Pereira, Fátima C, Serrano, Monica, Soutourina, Olga, Monot, Marc, Shelyakin, Pavel V, Gelfand, Mikhail S, Dupuy, Bruno, Henriques, Adriano O, Martin-Verstraete, Isabelle

“…Clostridium difficile, a Gram positive, anaerobic, spore-forming bacterium is an emergent pathogen and the most common cause of nosocomial diarrhea. Although…”
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