Search Results - "Park, Briton"
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Modeling the spread of the Zika virus using topological data analysis
Published in PloS one (13-02-2018)“…Zika virus (ZIKV), a disease spread primarily through the Aedes aegypti mosquito, was identified in Brazil in 2015 and was declared a global health emergency…”
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Curating a COVID-19 Data Repository and Forecasting County-Level Death Counts in the United States
Published in Harvard data science review (08-02-2021)Get full text
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Machine Learning for Information Extraction from Pathology Reports and Adaptive Offline Value Estimation in Reinforcement Learning
Published 01-01-2022“…The thesis is divided into two parts. The first part focuses on a healthcare-related application of machine learning, and the second part focuses on offline…”
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Dissertation -
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Supervised line attention for tumor attribute classification from pathology reports: Higher performance with less data
Published in Journal of biomedical informatics (01-10-2021)“…[Display omitted] •Annotating clinical documents is costly and time consuming.•Performance of natural language processing methods is limited in small data…”
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Stable Discovery of Interpretable Subgroups via Calibration in Causal Studies
Published in International statistical review (01-12-2020)“…Summary Building on Yu and Kumbier's predictability, computability and stability (PCS) framework and for randomised experiments, we introduce a novel…”
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Improving natural language information extraction from cancer pathology reports using transfer learning and zero-shot string similarity
Published in JAMIA open (01-07-2021)“…We develop natural language processing (NLP) methods capable of accurately classifying tumor attributes from pathology reports given minimal labeled examples…”
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Natural language processing systems for pathology parsing in limited data environments with uncertainty estimation
Published in JAMIA open (01-10-2020)“…Cancer is a leading cause of death, but much of the diagnostic information is stored as unstructured data in pathology reports. We aim to improve uncertainty…”
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Distributions of Mutational Effects and the Estimation of Directional Selection in Divergent Lineages of Arabidopsis thaliana
Published in Genetics (Austin) (01-08-2017)“…Mutations are crucial to evolution, providing the ultimate source of variation on which natural selection acts. Due to their key role, the distribution of…”
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PD58-09 EXTRACTING STRUCTURED INFORMATION FROM PATHOLOGY REPORTS USING NATURAL LANGUAGE PROCESSING AND MACHINE LEARNING
Published in The Journal of urology (01-04-2019)Get full text
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10
Modeling the spread of the Zika virus using topological data analysis
Published 12-12-2016“…Zika virus (ZIKV), a disease spread primarily through the Aedes aegypti mosquito, was identified in Brazil in 2015 and was declared a global health emergency…”
Get full text
Journal Article -
11
Diagnosing Transformers: Illuminating Feature Spaces for Clinical Decision-Making
Published 27-05-2023“…Pre-trained transformers are often fine-tuned to aid clinical decision-making using limited clinical notes. Model interpretability is crucial, especially in…”
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Enriched Annotations for Tumor Attribute Classification from Pathology Reports with Limited Labeled Data
Published 15-12-2020“…Precision medicine has the potential to revolutionize healthcare, but much of the data for patients is locked away in unstructured free-text, limiting research…”
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13
Stable discovery of interpretable subgroups via calibration in causal studies
Published 23-08-2020“…Building on Yu and Kumbier's PCS framework and for randomized experiments, we introduce a novel methodology for Stable Discovery of Interpretable Subgroups via…”
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Journal Article -
14
Curating a COVID-19 data repository and forecasting county-level death counts in the United States
Published 09-08-2020“…Published in Harvard Data Science Review, 2020 As the COVID-19 outbreak evolves, accurate forecasting continues to play an extremely important role in…”
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Journal Article