Search Results - "PODAR, M."

Single-Cell Genomics and the Oral Microbiome by Balachandran, M., Cross, K.L., Podar, M.

“…The human oral cavity is one of the first environments where microbes have been discovered and studied since the dawn of microbiology. Nevertheless,…”
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Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin by FLORES, G. E., SHAKYA, M., MENEGHIN, J., YANG, Z. K., SEEWALD, J. S., GEOFF WHEAT, C., PODAR, M., REYSENBACH, A.-L.

“…Diverse microbial communities thrive on and in deep‐sea hydrothermal vent mineral deposits. However, our understanding of the inter‐field variability in these…”
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Complete and Draft Genome Sequences of Six Members of the Aquificales by Reysenbach, Anna-Louise, Hamamura, N, Podar, M, Griffiths, E, Ferreira, S, Hochstein, R, Heidelberg, J, Johnson, J, Mead, D, Pohorille, A, Sarmiento, M, Schweighofer, K, Seshadri, R, Voytek, M A

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Anti-inflammatory effects of LJP 1586 [Z-3-fluoro-2-(4-methoxybenzyl)allylamine hydrochloride], an amine-based inhibitor of semicarbazide-sensitive amine oxidase activity by O'Rourke, Anne M, Wang, Eric Y, Miller, Andrew, Podar, Erika M, Scheyhing, Kelly, Huang, Li, Kessler, Christina, Gao, Hongfeng, Ton-Nu, Huong-Thu, Macdonald, Mary T, Jones, David S, Linnik, Matthew D

“…Semicarbazide-sensitive amine oxidase (SSAO, amine oxidase, copper-containing 3, and vascular adhesion protein-1) is a copper-containing enzyme that catalyzes…”
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Homodimerization of Tumor-Reactive Monoclonal Antibodies Markedly Increases their Ability to Induce Growth Arrest or Apoptosis of Tumor Cells by Ghetie, Maria-Ana, Podar, Erika M., Ilgen, Amy, Gordon, Brian E., Uhr, Jonathan W., Vitetta, Ellen S.

“…Monoclonal antibodies (mAbs) that exert antitumor activity can do so by virtue of their effector function and/or their ability to signal growth arrest or cell…”
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Design, Synthesis, and Biological Evaluation of Semicarbazide-Sensitive Amine Oxidase (SSAO) Inhibitors with Anti-inflammatory Activity by Wang, Eric Y, Gao, Hongfeng, Salter-Cid, Luisa, Zhang, Jun, Huang, Li, Podar, Erika M, Miller, Andrew, Zhao, Jingjing, O'Rourk, Anne, Linnik, Matthew D

“…In an attempt to examine the effect of inhibition of semicarbazide-sensitive amine oxidase (SSAO; EC 1.4.3.6, also known as VAP-1) as a novel anti-inflammatory…”
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Group II intron splicing in vivo by first-step hydrolysis by Perlman, Philip S, Podar, Mircea, Chu, Vi T, Pyle, Anna Marie

“…Group I, group II and spliceosomal introns splice by two sequential transesterification reactions. For both spliceosomal and group II introns, the first-step…”
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Stereochemical selectivity of group II intron splicing, reverse splicing, and hydrolysis reactions by Podar, Mircea, Perlman, Philip S., Padgett, Richard A.

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Comparative Metagenomics of Microbial Communities by Tringe, Susannah Green, von Mering, Christian, Kobayashi, Arthur, Salamov, Asaf A, Chen, Kevin, Chang, Hwai W, Podar, Mircea, Short, Jay M, Mathur, Eric J, Detter, John C, Bork, Peer, Hugenholtz, Philip, Rubin, Edward M

“…The species complexity of microbial communities and challenges in culturing representative isolates make it difficult to obtain assembled genomes. Here we…”
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Genome Streamlining in a Cosmopolitan Oceanic Bacterium by Giovannoni, Stephen J, Tripp, H. James, Givan, Scott, Podar, Mircea, Vergin, Kevin L, Baptista, Damon, Bibbs, Lisa, Eads, Jonathan, Richardson, Toby H, Noordewier, Michiel, Rappé, Michael S, Short, Jay M, Carrington, James C, Mathur, Eric J

“…The SAR11 clade consists of very small, heterotrophic marine [alpha]-proteobacteria that are found throughout the oceans, where they account for about 25% of…”
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Combination immunotoxin treatment and chemotherapy in SCID mice with advanced, disseminated Daudi lymphoma by Ghetie, Maria‐Ana, Podar, Erika M., Gordon, Brian E., Pantazis, Panayotis, Uhr, Jonathan W., Vitetta, Ellen S.

“…We describe the use of an immunotoxin (IT) cocktail (anti‐CD22‐ and anti‐CD19‐ricin A chain) and any 1 of 3 chemotherapeutic drugs (doxorubicin, cytoxan or…”
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korarchaeal genome reveals insights into the evolution of the Archaea by Elkins, James G, Podar, Mircea, Graham, David E, Makarova, Kira S, Wolf, Yuri, Randau, Lennart, Hedlund, Brian P, Brochier-Armanet, Céline, Kunin, Victor, Anderson, Iain, Lapidus, Alla, Goltsman, Eugene, Barry, Kerrie, Koonin, Eugene V, Hugenholtz, Phil, Kyrpides, Nikos, Wanner, Gerhard, Richardson, Paul, Keller, Martin, Stetter, Karl O

“…The candidate division Korarchaeota comprises a group of uncultivated microorganisms that, by their small subunit rRNA phylogeny, may have diverged early from…”
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Targeted Access to the Genomes of Low-Abundance Organisms in Complex Microbial Communities by PODAR, Mircea, ABULENCIA, Carl B, WALCHER, Marion, HUTCHISON, Don, ZENGLER, Karsten, GARCIA, Joseph A, HOLLAND, Trevin, COTTON, David, HAUSER, Loren, KELLER, Martin

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The Genome of Nanoarchaeum equitans: Insights into Early Archaeal Evolution and Derived Parasitism by Waters, Elizabeth, Hohn, Michael J., Ahel, Ivan, Graham, David E., Adams, Mark D., Barnstead, Mary, Beeson, Karen Y., Bibbs, Lisa, Bolanos, Randall, Keller, Martin, Kretz, Keith, Lin, Xiaoying, Mathur, Eric, Ni, Jingwei, Podar, Mircea, Richardson, Toby, Sutton, Granger G., Simon, Melvin, Söll, Dieter, Stetter, Karl O., Short, Jay M., Noordewier, Michiel

“…The hyperthermophile Nanoarchaeum equitans is an obligate symbiont growing in coculture with the crenarchaeon Ignicoccus. Ribosomal protein and rRNA-based…”
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Characterization of Archaeal Community in Contaminated and Uncontaminated Surface Stream Sediments by Porat, Iris, Vishnivetskaya, Tatiana A., Mosher, Jennifer J., Brandt, Craig C., Yang, Zamin K., Brooks, Scott C., Liang, Liyuan, Drake, Meghan M., Podar, Mircea, Brown, Steven D., Palumbo, Anthony V.

“…Archaeal communities from mercury and uranium-contaminated freshwater stream sediments were characterized and compared to archaeal communities present in an…”
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Exploring Nitrilase Sequence Space for Enantioselective Catalysis by Robertson, Dan E, Chaplin, Jennifer A, DeSantis, Grace, Podar, Mircea, Madden, Mark, Chi, Ellen, Richardson, Toby, Milan, Aileen, Miller, Mark, Weiner, David P, Wong, Kelvin, McQuaid, Jeff, Farwell, Bob, Preston, Lori A, Tan, Xuqiu, Snead, Marjory A, Keller, Martin, Mathur, Eric, Kretz, Patricia L, Burk, Mark J, Short, Jay M

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Genome Sequence of the Mercury-Methylating Strain Desulfovibrio desulfuricans ND132 by BROWN, Steven D, GILMOUR, Cynthia C, DETTER, John C, TAPIA, Roxanne, HAY, Cliff S, GOODWIN, Lynne A, CHENG, Jan-Fang, PITLUCK, Samuel, WOYKE, Tanja, MIKHAILOVA, Natalia, IVANOVA, Natalia N, HAN, James, KUCKEN, Amy M, LUCAS, Susan, LAPIDUS, Alla L, LAND, Miriam L, HAUSER, Loren J, PALUMBO, Anthony V, WALL, Judy D, ELIAS, Dwayne A, BRANDT, Craig C, PODAR, Mircea, CHERTKOV, Olga, HELD, Brittany, BRUCE, David C

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The Heteromeric Nanoarchaeum equitans Splicing Endonuclease Cleaves Noncanonical Bulge-Helix-Bulge Motifs of Joined tRNA Halves by Lennart Randau, Calvin, Kate, Michelle Hall, Yuan, Jing, Podar, Mircea, Li, Hong, Söll, Dieter

“…Among the tRNA population of the archaeal parasite Nanoarchaeum equitans are five species assembled from separate 5' and 3' tRNA halves and four species…”
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Discovery of Pectin-degrading Enzymes and Directed Evolution of a Novel Pectate Lyase for Processing Cotton Fabric by Solbak, Arne I., Richardson, Toby H., McCann, Ryan T., Kline, Katie A., Bartnek, Flash, Tomlinson, Geoff, Tan, Xuqiu, Parra-Gessert, Lilian, Frey, Gerhard J., Podar, Mircea, Luginbühl, Peter, Gray, Kevin A., Mathur, Eric J., Robertson, Dan E., Burk, Mark J., Hazlewood, Geoffrey P., Short, Jay M., Kerovuo, Janne

“…There is a growing need in the textile industry for more economical and environmentally responsible approaches to improve the scouring process as part of the…”
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An intersubunit disulfide bridge stabilizes the tetrameric nucleoside diphosphate kinase of Aquifex aeolicus by Boissier, Fanny, Georgescauld, Florian, Moynié, Lucile, Dupuy, Jean-William, Sarger, Claude, Podar, Mircea, Lascu, Ioan, Giraud, Marie-France, Dautant, Alain

“…The nucleoside diphosphate kinase (Ndk) catalyzes the reversible transfer of the γ‐phosphate from nucleoside triphosphate to nucleoside diphosphate. Ndks form…”
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