Search Results - "PERREAULT, Jean‐Pierre"
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Current overview on viroid–host interactions
Published in Wiley interdisciplinary reviews. RNA (01-03-2020)“…Viroids are one of the most enigmatic highly structured, circular, single‐stranded RNA phytopathogens. Although they are not known to code for any peptide,…”
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Motif independent identification of potential RNA G-quadruplexes by G4RNA screener
Published in Bioinformatics (Oxford, England) (15-11-2017)“…G-quadruplex structures in RNA molecules are known to have regulatory impacts in cells but are difficult to locate in the genome. The minimal requirements for…”
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Viroid‐derived small RNA induces early flowering in tomato plants by RNA silencing
Published in Molecular plant pathology (01-11-2018)“…Summary Viroid infection often leads to early flowering in the host plant. This report describes the targeting of the FRIGIDA‐like protein 3 (FRL3) mRNA in…”
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Classification of the Pospiviroidae based on their structural hallmarks
Published in PloS one (04-08-2017)“…The simplest known plant pathogens are the viroids. Because of their non-coding single-stranded circular RNA genome, they depend on both their sequence and…”
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G-quadruplexes formation in the 5'UTRs of mRNAs associated with colorectal cancer pathways
Published in PloS one (03-12-2018)“…RNA G-quadruplexes (rG4) are stable non-canonical secondary structures composed of G-rich sequences. Many rG4 structures located in the 5'UTRs of mRNAs act as…”
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Potato spindle tuber viroid infection triggers degradation of chloride channel protein CLC-b-like and Ribosomal protein S3a-like mRNAs in tomato plants
Published in Scientific reports (21-08-2017)“…It is well established that viroid derived small RNA (vd-sRNA) induces RNA silencing of endogenous mRNA. However, it remains not clear how exactly viroid…”
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Hop Latent Viroid: A Hidden Threat to the Cannabis Industry
Published in Viruses (01-03-2023)“…Hop latent viroid (HLVd) is the biggest concern for cannabis and hop growers worldwide. Although most HLVd-infected plants remain asymptomatic, research on…”
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Impact of Nucleic Acid Sequencing on Viroid Biology
Published in International journal of molecular sciences (01-08-2020)“…The early 1970s marked two breakthroughs in the field of biology: (i) The development of nucleotide sequencing technology; and, (ii) the discovery of the…”
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Citrus exocortis viroid causes ribosomal stress in tomato plants
Published in Nucleic acids research (19-09-2019)“…Viroids are naked RNAs that do not code for any known protein and yet are able to infect plants causing severe diseases. Because of their RNA nature, many…”
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Insights Into Potato Spindle Tuber Viroid Quasi-Species From Infection to Disease
Published in Frontiers in microbiology (03-07-2020)“…Viroids are non-coding RNA plant pathogens that are characterized by their possession of a high mutation level. Although the sequence heterogeneity in viroid…”
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Comprehensive secondary structure elucidation of four genera of the family Pospiviroidae
Published in PloS one (04-06-2014)“…Viroids are small, circular, single stranded RNA molecules that infect plants. Since they are non-coding, their structures play a critical role in their life…”
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Suppression of RNA-Dependent RNA Polymerase 6 Favors the Accumulation of Potato Spindle Tuber Viroid in Nicotiana Benthamiana
Published in Viruses (14-04-2019)“…To date, two plant genes encoding (RdRs) that play major roles in the defense against RNA viruses have been identified: (i) RdR1, which is responsible for the…”
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Global Profiling of the Cellular Alternative RNA Splicing Landscape during Virus-Host Interactions
Published in PloS one (06-09-2016)“…Alternative splicing (AS) is a central mechanism of genetic regulation which modifies the sequence of RNA transcripts in higher eukaryotes. AS has been shown…”
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Aven recognition of RNA G-quadruplexes regulates translation of the mixed lineage leukemia protooncogenes
Published in eLife (12-08-2015)“…G-quadruplexes (G4) are extremely stable secondary structures forming stacks of guanine tetrads. DNA G4 structures have been extensively studied, however, less…”
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Exploring mRNA 3′-UTR G-quadruplexes: evidence of roles in both alternative polyadenylation and mRNA shortening
Published in Nucleic acids research (01-06-2013)Get full text
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The Epstein-Barr virus EBNA1 protein modulates the alternative splicing of cellular genes
Published in Virology journal (04-03-2019)“…Alternative splicing (AS) is an important mRNA maturation step that allows increased variability and diversity of proteins in eukaryotes. AS is dysregulated in…”
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Toward a Better Understanding of G4 Evolution in the 3 Living Kingdoms
Published in Evolutionary bioinformatics online (01-01-2023)“…Background: G-quadruplexes (G4s) are secondary structures in DNA and RNA that impact various cellular processes, such as transcription, splicing, and…”
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Elucidation of the structures of all members of the Avsunviroidae family
Published in Molecular plant pathology (01-10-2014)“…Viroids are small single‐stranded RNA pathogens which cause significant damage to plants. As their nucleic acids do not encode for any proteins, they are…”
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Ro-Associated Y RNAs in Metazoans: Evolution and Diversification
Published in Molecular biology and evolution (01-08-2007)“…The Y genes encode small noncoding RNAs whose functions remain elusive, whose numbers vary between species, and whose major property is to be bound by the Ro60…”
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3′ RNA ligase mediated rapid amplification of cDNA ends for validating viroid induced cleavage at the 3′ extremity of the host mRNA
Published in Journal of virological methods (01-12-2017)“…5′ RNA ligase-mediated rapid amplification of cDNA ends (5′ RLM-RACE) is a widely-accepted method for the validation of direct cleavage of a target gene by a…”
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