Search Results - "Orom, Ulf Andersson"
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Gene Expression Profiling Reveals a Signaling Role of Glutathione in Redox Regulation
Published in Proceedings of the National Academy of Sciences - PNAS (27-09-2005)“…Proteins can form reversible mixed disulfides with glutathione (GSH). It has been hypothesized that protein glutathionylation may represent a mechanism of…”
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Long Noncoding RNAs Usher In a New Era in the Biology of Enhancers
Published in Cell (12-09-2013)“…Enhancer-associated long noncoding RNAs act over long distances and across chromosomes to activate transcription at distal promoters. Here, we address the…”
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3
Recent progress in miRNA biogenesis and decay
Published in RNA biology (2024)“…MicroRNAs are a class of small regulatory RNAs that mediate regulation of protein synthesis by recognizing sequence elements in mRNAs. MicroRNAs are processed…”
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Microprocessor Activity Controls Differential miRNA Biogenesis In Vivo
Published in Cell reports (Cambridge) (23-10-2014)“…In miRNA biogenesis, pri-miRNA transcripts are converted into pre-miRNA hairpins. The in vivo properties of this process remain enigmatic. Here, we determine…”
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Serial interactome capture of the human cell nucleus
Published in Nature communications (04-04-2016)“…Novel RNA-guided cellular functions are paralleled by an increasing number of RNA-binding proteins (RBPs). Here we present ‘serial RNA interactome capture’…”
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Noncoding RNAs and enhancers: complications of a long-distance relationship
Published in Trends in genetics (01-10-2011)“…Spatial and temporal regulation of gene expression is achieved through instructions provided by the distal transcriptional regulatory elements known as…”
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LincRNA H19 protects from dietary obesity by constraining expression of monoallelic genes in brown fat
Published in Nature communications (06-09-2018)“…Increasing brown adipose tissue (BAT) thermogenesis in mice and humans improves metabolic health and understanding BAT function is of interest for novel…”
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Predicting nuclear G-quadruplex RNA-binding proteins with roles in transcription and phase separation
Published in Nature communications (22-03-2024)“…RNA-binding proteins are central for many biological processes and their characterization has demonstrated a broad range of functions as well as a wide…”
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Isolation of microRNA targets using biotinylated synthetic microRNAs
Published in Methods (San Diego, Calif.) (01-10-2007)“…MicroRNAs are small regulatory RNAs found in multicellular organisms where they post-transcriptionally regulate gene expression. In animals, microRNAs bind…”
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Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin
Published in Nature communications (24-04-2018)“…Long ncRNAs are often enriched in the nucleus and at chromatin, but whether their dissociation from chromatin is important for their role in transcription…”
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miR-200b mediates post-transcriptional repression of ZFHX1B
Published in RNA (Cambridge) (01-08-2007)“…MicroRNAs have important functions during animal development and homeostasis through post-transcriptional regulation of their cognate mRNA targets. ZFHX1B is a…”
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Bidirectional expression of long ncRNA/protein-coding gene pairs in cancer
Published in Briefings in functional genomics (01-05-2016)“…Bidirectional initiation of transcription by RNA polymerase II occurs prevalently at active promoters during protein-coding gene (PCG) expression. Upstream,…”
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Microprocessor Activity Controls Differential miRNA Biogenesis In Vivo
Published in Cell reports (Cambridge) (17-02-2015)Get full text
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MicroRNA-203 regulates caveolin-1 in breast tissue during caloric restriction
Published in Cell cycle (Georgetown, Tex.) (01-04-2012)“…Caloric restriction has been shown to increase lifespan in several organisms and to delay onset of age-related diseases. The transcriptional response to…”
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15
MicroRNA-10a Binds the 5′UTR of Ribosomal Protein mRNAs and Enhances Their Translation
Published in Molecular cell (23-05-2008)“…MicroRNAs (miRNAs) are small RNAs that function as posttranscriptional regulators of gene expression. miRNAs affect a variety of signaling pathways, and…”
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Long non-coding RNAs and enhancers
Published in Current opinion in genetics & development (01-04-2011)“…Long non-coding RNAs (ncRNAs) are emerging as important regulatory factors in mammalian genomics. A number of reports within the last 2 years have identified…”
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Long Noncoding RNAs with Enhancer-like Function in Human Cells
Published in Cell (01-10-2010)“…While the long noncoding RNAs (ncRNAs) constitute a large portion of the mammalian transcriptome, their biological functions has remained elusive. A few long…”
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Cellular Fractionation and Isolation of Chromatin-Associated RNA
Published in Methods in molecular biology (Clifton, N.J.) (01-01-2017)“…In eukaryotic cells, the synthesis, processing, and functions of RNA molecules are confined to distinct subcellular compartments. Biochemical fractionation of…”
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N4-acetylcytidine (ac4C) promotes mRNA localization to stress granules
Published in EMBO reports (12-04-2024)“…Stress granules are an integral part of the stress response that are formed from non-translating mRNAs aggregated with proteins. While much is known about…”
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The Non-Coding RNA Journal Club: Highlights on Recent Papers-7
Published in Non-coding RNA (11-06-2019)“…We are delighted to share with you our seventh Journal Club and highlight some of the most interesting papers published recently [...]…”
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