Search Results - "Orlando, Ron"

Quantitative analysis of glycoprotein glycans by Orlando, Ron

“…The ability to quantitatively determine changes in the N- and O-linked glycans is an essential component of comparative glycomics. Multiple strategies are…”
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Embracing Innovation and Accessibility in Biomolecular Research Publishing by Orlando, Ron, Tegbaru, Dawit

“…We are thrilled to share the latest developments at the Journal of Biomolecular Techniques (JBT), your esteemed peer-reviewed publication dedicated to…”
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Liquid Chromatography-Selected Reaction Monitoring (LC-SRM) Approach for the Separation and Quantitation of Sialylated N‑Glycans Linkage Isomers by Tao, Shujuan, Huang, Yining, Boyes, Barry E, Orlando, Ron

“…The study of N-linked glycans is among the most challenging bioanalytical tasks because of their complexity and variety. The presence of glycoform families…”
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Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan:galacturonosyltransferase complex by Atmodjo, Melani A, Sakuragi, Yumiko, Zhu, Xiang, Burrell, Amy J, Mohanty, Sushree S, Atwood, James A. III, Orlando, Ron, Scheller, Henrik V, Mohnen, Debra

“…Plant cell wall pectic polysaccharides are arguably the most complex carbohydrates in nature. Progress in understanding pectin synthesis has been slow due to…”
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The steady-state transcriptome of the four major life-cycle stages of Trypanosoma cruzi by Minning, Todd A, Weatherly, D Brent, Atwood, 3rd, James, Orlando, Ron, Tarleton, Rick L

“…Chronic chagasic cardiomyopathy is a debilitating and frequently fatal outcome of human infection with the protozoan parasite, Trypanosoma cruzi. Microarray…”
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integrated transcriptomic and computational analysis for biomarker identification in gastric cancer by Cui, Juan, Chen, Yunbo, Chou, Wen-Chi, Sun, Liankun, Chen, Li, Suo, Jian, Ni, Zhaohui, Zhang, Ming, Kong, Xiaoxia, Hoffman, Lisabeth L, Kang, Jinsong, Su, Yingying, Olman, Victor, Johnson, Darryl, Tench, Daniel W, Amster, I. Jonathan, Orlando, Ron, Puett, David, Li, Fan, Xu, Ying

“…This report describes an integrated study on identification of potential markers for gastric cancer in patients' cancer tissues and sera based on: (i)…”
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GAG-ID: Heparan Sulfate (HS) and Heparin Glycosaminoglycan High-Throughput Identification Software[S] by Chiu, Yulun, Huang, Rongrong, Orlando, Ron, Sharp, Joshua S.

“…Heparin and heparan sulfate are very large linear polysaccharides that undergo a complex variety of modifications and are known to play important roles in…”
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Proteomic analysis of the acidocalcisome, an organelle conserved from bacteria to human cells by Huang, Guozhong, Ulrich, Paul N, Storey, Melissa, Johnson, Darryl, Tischer, Julie, Tovar, Javier A, Moreno, Silvia N J, Orlando, Ron, Docampo, Roberto

“…Acidocalcisomes are acidic organelles present in a diverse range of organisms from bacteria to human cells. In this study acidocalcisomes were purified from…”
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Ethological principles predict the neuropeptides co-opted to influence parenting by Cunningham, Christopher B., Badgett, Majors J., Meagher, Richard B., Orlando, Ron, Moore, Allen J.

“…Ethologists predicted that parental care evolves by modifying behavioural precursors in the asocial ancestor. As a corollary, we predict that the evolved…”
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N-glycosylation profiling of porcine reproductive and respiratory syndrome virus envelope glycoprotein 5 by Li, Juan, Tao, Shujuan, Orlando, Ron, Murtaugh, Michael P

“…Abstract Porcine reproductive and respiratory syndrome virus (PRRSV) is a positive-sense ssRNA virus whose envelope contains four glycoproteins and three…”
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Properties of the cuticular proteins of Anopheles gambiae as revealed by serial extraction of adults by Zhou, Yihong, Badgett, Majors J, Billard, Lynne, Bowen, John Hunter, Orlando, Ron, Willis, Judith H

“…How cuticular proteins (CPs) interact with chitin and with each other in the cuticle remains unresolved. We employed LC-MS/MS to identify CPs from 5-6 day-old…”
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Biosynthesis of 4-Thiouridine in tRNA in the Methanogenic Archaeon Methanococcus maripaludis by Liu, Yuchen, Zhu, Xiang, Nakamura, Akiyoshi, Orlando, Ron, Söll, Dieter, Whitman, William B.

“…4-Thiouridine (s4U) is a conserved modified nucleotide at position 8 of bacterial and archaeal tRNAs and plays a role in protecting cells from near-UV killing…”
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Distinct septin heteropolymers co-exist during multicellular development in the filamentous fungus Aspergillus nidulans by Hernández-Rodríguez, Yainitza, Masuo, Shunsuke, Johnson, Darryl, Orlando, Ron, Smith, Amy, Couto-Rodriguez, Mara, Momany, Michelle

“…Septins are important components of the cytoskeleton that are highly conserved in eukaryotes and play major roles in cytokinesis, patterning, and many…”
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Predicting the Retention Behavior of Specific O -Linked Glycopeptides by Badgett, Majors J, Boyes, Barry, Orlando, Ron

“…-Linked glycosylation is a common post-translational modification that can alter the overall structure, polarity, and function of proteins. Reverse-phase (RP)…”
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proteomic study of pectin-degrading enzymes secreted by Botrytis cinerea grown in liquid culture by Shah, Punit, Gutierrez-Sanchez, Gerardo, Orlando, Ron, Bergmann, Carl

“…Botrytis cinerea is a pathogenic filamentous fungus, which infects more than 200 plant species. The enzymes secreted by B. cinerea play an important role in…”
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Identification and localization of Myxococcus xanthus porins and lipoproteins by Bhat, Swapna, Zhu, Xiang, Patel, Ricky P, Orlando, Ron, Shimkets, Lawrence J

“…Myxococcus xanthus DK1622 contains inner (IM) and outer membranes (OM) separated by a peptidoglycan layer. Integral membrane, β-barrel proteins are found…”
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Quantitation by Isobaric Labeling: Applications to Glycomics by Atwood, James A, Cheng, Lei, Alvarez-Manilla, Gerardo, Warren, Nicole L, York, William S, Orlando, Ron

“…The study of glycosylation patterns (glycomics) in biological samples is an emerging field that can provide key insights into cell development and pathology. A…”
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Carbon Fixation Driven by Molecular Hydrogen Results in Chemolithoautotrophically Enhanced Growth of Helicobacter pylori by Kuhns, Lisa G, Benoit, Stéphane L, Bayyareddy, Krishnareddy, Johnson, Darryl, Orlando, Ron, Evans, Alexandra L, Waldrop, Grover L, Maier, Robert J

“…A molecular hydrogen (H2)-stimulated, chemolithoautotrophic growth mode for the gastric pathogen Helicobacter pylori is reported. In a culture medium…”
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IDAWG: Metabolic Incorporation of Stable Isotope Labels for Quantitative Glycomics of Cultured Cells by Orlando, Ron, Lim, Jae-Min, Atwood, James A., Angel, Peggi M., Fang, Meng, Aoki, Kazuhiro, Alvarez-Manilla, Gerardo, Moremen, Kelley W., York, William S., Tiemeyer, Michael, Pierce, Michael, Dalton, Stephen, Wells, Lance

“…Robust quantification is an essential component of comparative -omic strategies. In this regard, glycomics lags behind proteomics. Although various…”
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Glycoproteomic Analysis of Embryonic Stem Cells: Identification of Potential Glycobiomarkers Using Lectin Affinity Chromatography of Glycopeptides by Alvarez-Manilla, Gerardo, Warren, Nicole L, Atwood, James, Orlando, Ron, Dalton, Stephen, Pierce, Michael

“…Numerous studies have recently focused on the identification of specific glycan biomarkers, given the important roles that protein linked glycans play, for…”
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