Search Results - "Olabode, S."

Molecular source attribution by Chao, Elisa, Chato, Connor, Vender, Reid, Olabode, Abayomi S, Ferreira, Roux-Cil, Poon, Art F. Y

“…[...]source attribution may be used to estimate the probability that an infection was transmitted from one specific individual to another, i.e., "who infected…”
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Effective and targeted latency reversal in CD4 + T cells from individuals on long term combined antiretroviral therapy initiated during chronic HIV-1 infection by Ngo, Minh Ha, Pankrac, Joshua, Ho, Ryan C Y, Ndashimye, Emmanuel, Pawa, Rahul, Ceccacci, Renata, Biru, Tsigereda, Olabode, Abayomi S, Klein, Katja, Li, Yue, Kovacs, Colin, Assad, Robert, Jacobson, Jeffrey M, Canaday, David H, Tomusange, Stephen, Jamiru, Samiri, Anok, Aggrey, Kityamuweesi, Taddeo, Buule, Paul, Galiwango, Ronald M, Reynolds, Steven J, Quinn, Thomas C, Redd, Andrew D, Prodger, Jessica L, Mann, Jamie F S, Arts, Eric J

“…To date, an affordable, effective treatment for an HIV-1 cure remains only a concept with most "latency reversal" agents (LRAs) lacking specificity for the…”
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Prevalence of Rhesus C and D Alloantibodies among Rhesus-Negative Women of Child Bearing Age at a Tertiary Hospital in South-West Nigeria by Otomewo, L, John-Olabode, S, Okunade, K, Olorunfemi, G, Ajie, I

“…Background: A major cause of hemolytic disease of the fetus and newborn (HDFN) is an incompatibility of the Rhesus (Rh) blood group between the mother and…”
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Prognostic impact of pretreatment thrombocytosis in epithelial ovarian cancer by Okunade, K, Dawodu, O, Adenekan, M, Nwogu, C, Awofeso, O, Ugwu, A, Salako, O, John-Olabode, S, Olowoselu, O, Anorlu, R

“…Aims: This study was aimed at investigating the prognostic impact of pretreatment thrombocytosis in epithelial ovarian cancer (EOC) patients in Lagos, Nigeria…”
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Evidence for a recombinant origin of HIV-1 Group M from genomic variation by Olabode, Abayomi S, Avino, Mariano, Ng, Garway T, Abu-Sardanah, Faisal, Dick, David W, Poon, Art F Y

“…Abstract Reconstructing the early dynamics of the HIV-1 pandemic can provide crucial insights into the socioeconomic drivers of emerging infectious diseases in…”
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Integration of Seismic and Petrophysics to Characterize Reservoirs in “ALA” Oil Field, Niger Delta by Alao, P. A., Opeloye, S. A., Olabode, S. O.

“…In the exploration and production business, by far the largest component of geophysical spending is driven by the need to characterize (potential) reservoirs…”
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Production of fuel-blends from waste tyre and plastic by catalytic and integrated pyrolysis for use in compression ignition (CI) engines by Oni, Babalola Aisosa, Sanni, Samuel Eshorame, Olabode, Oluwasanmi S.

“…•Waste plastic oils were obtained from different plastic materials.•The waste tyre oil was also produced and blended with the plastic oils for use in a CI…”
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Ebolavirus is evolving but not changing: No evidence for functional change in EBOV from 1976 to the 2014 outbreak by Olabode, Abayomi S, Jiang, Xiaowei, Robertson, David L, Lovell, Simon C

“…Abstract The 2014 epidemic of Ebola virus disease (EVD) has had a devastating impact in West Africa. Sequencing of ebolavirus (EBOV) from infected individuals…”
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Phylogenetic Reconstruction and Functional Characterization of the Ancestral Nef Protein of Primate Lentiviruses by Olabode, Abayomi S, Mumby, Mitchell J, Wild, Tristan A, Muñoz-Baena, Laura, Dikeakos, Jimmy D, Poon, Art F Y

“…Abstract Nef is an accessory protein unique to the primate HIV-1, HIV-2, and SIV lentiviruses. During infection, Nef functions by interacting with multiple…”
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High-level resistance to bictegravir and cabotegravir in subtype A- and D-infected HIV-1 patients failing raltegravir with multiple resistance mutations by Ndashimye, Emmanuel, Li, Yue, Reyes, Paul S, Avino, Mariano, Olabode, Abayomi S, Kityo, Cissy M, Kyeyune, Fred, Nankya, Immaculate, Quiñones-Mateu, Miguel E, Barr, Stephen D, Arts, Eric J

“…Abstract Objectives The second-generation integrase strand transfer inhibitor (INSTI) bictegravir is becoming accessible in low- and middle-income countries…”
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Revisiting the recombinant history of HIV-1 group M with dynamic network community detection by Olabode, Abayomi S, Ng, Garway T, Wade, Kaitlyn E, Salnikov, Mikhail, Grant, Heather E, Dick, David W, Poon, Art F Y

“…The prevailing abundance of full-length HIV type 1 (HIV-1) genome sequences provides an opportunity to revisit the standard model of HIV-1 group M (HIV-1/M)…”
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Enhancement of CD4 Binding, Host Cell Entry, and Sensitivity to CD4bs Antibody Inhibition Conferred by a Natural but Rare Polymorphism in the HIV-1 Envelope by Ratcliff, Annette N, Venner, Colin M, Olabode, Abayomi S, Knapp, Jason, Pankrac, Joshua, Derecichei, Iulian, Gibson, Richard M, Finzi, Andrés, Li, Yue, Mann, Jamie F S, Arts, Eric J

“…A rare but natural polymorphism in the HIV-1 envelope (Env) glycoprotein, lysine at position 425 was selected as a mutation conferring resistance to maraviroc…”
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Accumulation of integrase strand transfer inhibitor resistance mutations confers high-level resistance to dolutegravir in non-B subtype HIV-1 strains from patients failing raltegravir in Uganda by Ndashimye, Emmanuel, Avino, Mariano, Olabode, Abayomi S, Poon, Art F Y, Gibson, Richard M, Li, Yue, Meadows, Adam, Tan, Christine, Reyes, Paul S, Kityo, Cissy M, Kyeyune, Fred, Nankya, Immaculate, Quiñones-Mateu, Miguel E, Arts, Eric J

“…Abstract Background Increasing first-line treatment failures in low- and middle-income countries (LMICs) have led to increased use of integrase strand transfer…”
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Tuning intrinsic disorder predictors for virus proteins by Almog, Gal, Olabode, Abayomi S, Poon, Art F Y

“…Abstract Many virus-encoded proteins have intrinsically disordered regions that lack a stable, folded three-dimensional structure. These disordered proteins…”
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Early Warning Measurement of SARS-CoV‑2 Variants of Concern in Wastewaters by Mass Spectrometry by Peng, Jiaxi, Sun, Jianxian, Yang, Minqing Ivy, Gibson, Richard M., Arts, Eric J., Olabode, Abayomi S., Poon, Art F. Y., Wang, Xianyao, Wheeler, Aaron R., Edwards, Elizabeth A., Peng, Hui

“…Wastewater surveillance has rapidly emerged as an early warning tool to track COVID-19. However, the early warning measurement of new SARS-CoV-2 variants of…”
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CoVizu: Rapid analysis and visualization of the global diversity of SARS-CoV-2 genomes by Ferreira, Roux-Cil, Wong, Emmanuel, Gugan, Gopi, Wade, Kaitlyn, Liu, Molly, Baena, Laura Muñoz, Chato, Connor, Lu, Bonnie, Olabode, Abayomi S, Poon, Art F Y

“…Abstract Phylogenetics has played a pivotal role in the genomic epidemiology of severe acute respiratory syndrome coronavirus 2, such as tracking the emergence…”
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Tracking SARS-CoV-2 variants of concern in wastewater: an assessment of nine computational tools using simulated genomic data by Sutcliffe, Steven G, Kraemer, Susanne A, Ellmen, Isaac, Knapp, Jennifer J, Overton, Alyssa K, Nash, Delaney, Nissimov, Jozef I, Charles, Trevor C, Dreifuss, David, Topolsky, Ivan, Baykal, Pelin I, Fuhrmann, Lara, Jablonski, Kim P, Beerenwinkel, Niko, Levy, Joshua I, Olabode, Abayomi S, Becker, Devan G, Gugan, Gopi, Brintnell, Erin, Poon, Art F Y, Valieris, Renan, Drummond, Rodrigo D, Defelicibus, Alexandre, Dias-Neto, Emmanuel, Rosales, Rafael A, Tojal da Silva, Israel, Orfanou, Aspasia, Psomopoulos, Fotis, Pechlivanis, Nikolaos, Pipes, Lenore, Chen, Zihao, Baaijens, Jasmijn A, Baym, Michael, Shapiro, B Jesse

“…Wastewater-based surveillance (WBS) is an important epidemiological and public health tool for tracking pathogens across the scale of a building,…”
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The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology by Gill, Erin E, Jia, Baofeng, Murall, Carmen Lia, Poujol, Raphaël, Anwar, Muhammad Zohaib, John, Nithu Sara, Richardsson, Justin, Hobb, Ashley, Olabode, Abayomi S, Lepsa, Alexandru, Duggan, Ana T, Tyler, Andrea D, N'Guessan, Arnaud, Kachru, Atul, Chan, Brandon, Yoshida, Catherine, Yung, Christina K, Bujold, David, Andric, Dusan, Su, Edmund, Griffiths, Emma J, Van Domselaar, Gary, Jolly, Gordon W, Ward, Heather K E, Feher, Henrich, Baker, Jared, Simpson, Jared T, Uddin, Jaser, Ragoussis, Jiannis, Eubank, Jon, Fritz, Jörg H, Gálvez, José Héctor, Fang, Karen, Cullion, Kim, Rivera, Leonardo, Xiang, Linda, Croxen, Matthew A, Shiell, Mitchell, Prystajecky, Natalie, Quirion, Pierre-Olivier, Bajari, Rosita, Rich, Samantha, Mubareka, Samira, Moreira, Sandrine, Cain, Scott, Sutcliffe, Steven G, Kraemer, Susanne A, Alturmessov, Yelizar, Joly, Yann, Cphln Consortium, CanCOGeN Consortium, VirusSeq Data Portal Academic And Health Network, Fiume, Marc, Snutch, Terrance P, Bell, Cindy, Lopez-Correa, Catalina, Hussin, Julie G, Joy, Jeffrey B, Colijn, Caroline, Gordon, Paul M K, Hsiao, William W L, Poon, Art F Y, Knox, Natalie C, Courtot, Mélanie, Stein, Lincoln, Otto, Sarah P, Bourque, Guillaume, Shapiro, B Jesse, Brinkman, Fiona S L

“…The COVID-19 pandemic led to a large global effort to sequence SARS-CoV-2 genomes from patient samples to track viral evolution and inform the public health…”
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Adaptive HIV-1 evolutionary trajectories are constrained by protein stability by Olabode, Abayomi S., Kandathil, Shaun M., Lovell, Simon C., Robertson, David L.

“…Abstract Despite the use of combination antiretroviral drugs for the treatment of HIV-1 infection, the emergence of drug resistance remains a problem…”
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Physicochemical properties of wastewater effluent from two selected wastewater treatment plants (Cape Town) for water quality improvement by Olabode, G. S., Olorundare, O. F., Somerset, V. S.

“…Effluent from wastewater treatment plants (WWTPs) is one of the main sources of pollution that seriously affect the physicochemical parameters in water bodies…”
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