Search Results - "Ogata, Craig M."

Structure, signaling mechanism and regulation of the natriuretic peptide receptor guanylate cyclase by Misono, Kunio S, Philo, John S, Arakawa, Tsutomu, Ogata, Craig M, Qiu, Yue, Ogawa, Haruo, Young, Howard S

“…Atrial natriuretic peptide (ANP) and the homologous B-type natriuretic peptide are cardiac hormones that dilate blood vessels and stimulate natriuresis and…”
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Sample manipulation and data assembly for robust microcrystal synchrotron crystallography by Guo, Gongrui, Fuchs, Martin R, Shi, Wuxian, Skinner, John, Berman, Evanna, Ogata, Craig M, Hendrickson, Wayne A, McSweeney, Sean, Liu, Qun

“…With the recent developments in microcrystal handling, synchrotron microdiffraction beamline instrumentation and data analysis, microcrystal crystallo-graphy…”
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Transmission electron microscopy for the evaluation and optimization of crystal growth by Stevenson, Hilary P., Lin, Guowu, Barnes, Christopher O., Sutkeviciute, Ieva, Krzysiak, Troy, Weiss, Simon C., Reynolds, Shelley, Wu, Ying, Nagarajan, Veeranagu, Makhov, Alexander M., Lawrence, Robert, Lamm, Emily, Clark, Lisa, Gardella, Timothy J., Hogue, Brenda G., Ogata, Craig M., Ahn, Jinwoo, Gronenborn, Angela M., Conway, James F., Vilardaga, Jean-Pierre, Cohen, Aina E., Calero, Guillermo

“…The crystallization of protein samples remains the most significant challenge in structure determination by X‐ray crystallography. Here, the effectiveness of…”
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Automated sample-scanning methods for radiation damage mitigation and diffraction-based centering of macromolecular crystals by Hilgart, Mark C., Sanishvili, Ruslan, Ogata, Craig M., Becker, Michael, Venugopalan, Nagarajan, Stepanov, Sergey, Makarov, Oleg, Smith, Janet L., Fischetti, Robert F.

“…Automated scanning capabilities have been added to the data acquisition software, JBluIce‐EPICS, at the National Institute of General Medical Sciences and the…”
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The structure and function of MCM from archaeal M. Thermoautotrophicum by Chen, Xiaojiang S, Fletcher, Ryan J, Bishop, Brooke E, Leon, Ronald P, Sclafani, Robert A, Ogata, Craig M

“…Eukaryotic chromosomal DNA is licensed for replication precisely once in each cell cycle. The mini-chromosome maintenance (MCM) complex plays a role in this…”
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Structural Analysis of Substrate Binding by the Molecular Chaperone DnaK by Zhu, Xiaotian, Zhao, Xun, Burkholder, William F., Gragerov, Alexander, Ogata, Craig M., Gottesman, Max E., Hendrickson, Wayne A.

“…DnaK and other members of the 70-kilodalton heat-shock protein (hsp70) family promote protein folding, interaction, and translocation, both constitutively and…”
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Reversibly bound chloride in the atrial natriuretic peptide receptor hormone‐binding domain: Possible allosteric regulation and a conserved structural motif for the chloride‐binding site by Ogawa, Haruo, Qiu, Yue, Philo, John S., Arakawa, Tsutomu, Ogata, Craig M., Misono, Kunio S.

“…The binding of atrial natriuretic peptide (ANP) to its receptor requires chloride, and it is chloride concentration dependent. The extracellular domain (ECD)…”
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Flavivirus NS1 Structures Reveal Surfaces for Associations with Membranes and the Immune System by Akey, David L., Brown, W. Clay, Dutta, Somnath, Konwerski, Jamie, Jose, Joyce, Jurkiw, Thomas J., DelProposto, James, Ogata, Craig M., Skiniotis, Georgios, Kuhn, Richard J., Smith, Janet L.

“…Flaviviruses, the human pathogens responsible for dengue fever, West Nile fever, tick-borne encephalitis, and yellow fever, are endemic in tropical and…”
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Crystal structures of a dodecameric multicopper oxidase from Marinithermus hydrothermalis by Paavola, Joseph L., Battistin, Umberto, Ogata, Craig M., Georgiadis, Millie M.

“…Multicopper oxidases (MCOs) represent a diverse family of enzymes that catalyze the oxidation of either an organic or a metal substrate with concomitant…”
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A high-transparency, micro-patternable chip for X-ray diffraction analysis of microcrystals under native growth conditions by Murray, Thomas D., Lyubimov, Artem Y., Ogata, Craig M., Vo, Huy, Uervirojnangkoorn, Monarin, Brunger, Axel T., Berger, James M.

“…Microcrystals present a significant impediment to the determination of macromolecular structures by X‐ray diffraction methods. Although microfocus synchrotron…”
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High-throughput in situ X-ray screening of and data collection from protein crystals at room temperature and under cryogenic conditions by Broecker, Jana, Morizumi, Takefumi, Ou, Wei-Lin, Klingel, Viviane, Kuo, Anling, Kissick, David J, Ishchenko, Andrii, Lee, Ming-Yue, Xu, Shenglan, Makarov, Oleg, Cherezov, Vadim, Ogata, Craig M, Ernst, Oliver P

“…This protocol describes procedures for the high-throughput in situ X-ray screening of and data collection from soluble and membrane-protein crystals at room…”
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A Versatile System for High-Throughput In Situ X‑ray Screening and Data Collection of Soluble and Membrane-Protein Crystals by Broecker, Jana, Klingel, Viviane, Ou, Wei-Lin, Balo, Aidin R, Kissick, David J, Ogata, Craig M, Kuo, Anling, Ernst, Oliver P

“…In recent years, in situ data collection has been a major focus of progress in protein crystallography. Here, we introduce the Mylar in situ method using…”
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Locating and Visualizing Crystals for X-Ray Diffraction Experiments by Becker, Michael, Kissick, David J, Ogata, Craig M

“…Macromolecular crystallography has advanced from using macroscopic crystals, which might be >1 mm on a side, to crystals that are essentially invisible to the…”
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Use of massively multiple merged data for low-resolution S-SAD phasing and refinement of flavivirus NS1 by Akey, David L., Brown, W. Clay, Konwerski, Jamie R., Ogata, Craig M., Smith, Janet L.

“…An emergent challenge in macromolecular crystallography is the identification of the substructure from native anomalous scatterers in crystals that diffract to…”
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Crystal structure of hormone-bound atrial natriuretic peptide receptor extracellular domain: rotation mechanism for transmembrane signal transduction by Ogawa, Haruo, Qiu, Yue, Ogata, Craig M, Misono, Kunio S

“…A cardiac hormone, atrial natriuretic peptide (ANP), plays a major role in blood pressure and volume regulation. ANP activities are mediated by a single span…”
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Mechanistic implications from the structure of a catalytic fragment of Moloney murine leukemia virus reverse transcriptase by Georgiadis, Millie M, Jessen, Sven M, Ogata, Craig M, Telesnitsky, Alice, Goff, Stephen P, Hendrickson, Wayne A

“…Background: Reverse transcriptase (RT) converts the single-stranded RNA genome of a retrovirus into a double-stranded DNA copy for integration into the host…”
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Multiwavelength Anomalous Diffraction Analysis at the M Absorption Edges of Uranium by Liu, Yee, Ogata, Craig M., Hendrickson, Wayne A.

“…The multiwavelength anomalous diffraction (MAD) method for phase evaluation is now widely used in macromolecular crystallography. Successful MAD structure…”
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Tightly integrated single- and multi-crystal data collection strategy calculation and parallelized data processing in JBluIce beamline control system by Pothineni, Sudhir Babu, Venugopalan, Nagarajan, Ogata, Craig M., Hilgart, Mark C., Stepanov, Sergey, Sanishvili, Ruslan, Becker, Michael, Winter, Graeme, Sauter, Nicholas K., Smith, Janet L., Fischetti, Robert F.

“…The calculation of single‐ and multi‐crystal data collection strategies and a data processing pipeline have been tightly integrated into the macromolecular…”
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Fast fluorescence techniques for crystallography beamlines by Stepanov, Sergey, Hilgart, Mark, Yoder, Derek W., Makarov, Oleg, Becker, Michael, Sanishvili, Ruslan, Ogata, Craig M., Venugopalan, Nagarajan, Aragão, David, Caffrey, Martin, Smith, Janet L., Fischetti, Robert F.

“…This paper reports on several developments of X‐ray fluorescence techniques for macromolecular crystallography recently implemented at the National Institute…”
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Characterization of the secondary binding sites of Maclura pomifera agglutinin by glycan array and crystallographic analyses by Huang, Jingwei, Xu, Zan, Wang, Die, Ogata, Craig M, Palczewski, Krzysztof, Lee, Xavier, Young, N. Martin

“…The Maclura pomifera agglutinin (MPA) recognizes the T-antigen disaccharide Galβ1,3GalNAc mainly through interaction of the α-GalNAc moiety with its primary…”
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