Search Results - "Oferkin, I. V."

Application of Molecular Modeling to Urokinase Inhibitors Development by Sulimov, V. B., Katkova, E. V., Oferkin, I. V., Sulimov, A. V., Romanov, A. N., Roschin, A. I., Beloglazova, I. B., Plekhanova, O. S., Tkachuk, V. A., Sadovnichiy, V. A.

“…Urokinase-type plasminogen activator (uPA) plays an important role in the regulation of diverse physiologic and pathologic processes. Experimental research has…”
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Use of molecular dynamics simulation in interpreting the atomic force microscopy data by Godsie, M. G., Tolstova, A. P., Oferkin, I. V.

“…A new approach to interpreting and refining the atomic force microscopy (AFM) data, based on comparing them with the output of computer-simulated probe…”
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Can local energy minimization refine the PDB structures of different resolution universally? by Godsie, M. G., Gromova, A. P., Oferkin, I. V., Mironov, P. V.

“…Local energy minimization was statistically tested as the refinement strategy for PDB structure pairs of different resolution. The 13 pairs of structures with…”
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Supercomputer investigation of the protein-ligand system low-energy minima by Oferkin, I V, Sulimov, A V, Katkova, E V, Kutov, D K, Grigoriev, F V, Kondakova, O A, Sulimov, V B

“…The accuracy of the protein-ligand binding energy calculations and ligand positioning is strongly influenced by the choice of the docking target function. This…”
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Application of molecular dynamics simulation to the interpretation of atomic force microscopy data by Godzi, M G, Tolstova, A P, Oferkin, I V

“…A new approach to the interpretation and refining of experimental atomic force microscopy (AFM) data has been developed, which is based on the comparison with…”
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Can the local energy minimization refine the PDB structures of different resolution universally? by Godzi, M G, Gromova, A P, Oferkin, I V, Mironov, P V

“…The local energy minimization was statistically validated as the refinement strategy for PDB structure pairs of different resolution. Thirteen pairs of…”
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Molecular modeling methods for supramolecular complexes: A hierarchical approach by Grigor’ev, F. V., Romanov, A. N., Laikov, D. N., Zhabin, S. N., Golovacheva, A. Yu, Oferkin, I. V., Sulimov, A. V., Bazilevskii, M. V., Bagatur’yants, A. A., Sulimov, V. B., Alfimov, M. V.

“…An original hierarchical approach to the determination of the structure, stability, and properties of supramolecular complexes (SC) formed by two or more…”
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