Search Results - "Ocone, Andrea"

Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data by Ocone, Andrea, Haghverdi, Laleh, Mueller, Nikola S, Theis, Fabian J

“…High-dimensional single-cell snapshot data are becoming widespread in the systems biology community, as a mean to understand biological processes at the…”
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A stochastic hybrid model of a biological filter by Ocone, Andrea, Sanguinetti, Guido

“…We present a hybrid model of a biological filter, a genetic circuit which removes fast fluctuations in the cell's internal representation of the extra cellular…”
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Systems analysis of transcription factor activities in environments with stable and dynamic oxygen concentrations by Rolfe, Matthew D., Ocone, Andrea, Stapleton, Melanie R., Hall, Simon, Trotter, Eleanor W., Poole, Robert K., Sanguinetti, Guido, Green, Jeffrey

“…Understanding gene regulation requires knowledge of changes in transcription factor (TF) activities. Simultaneous direct measurement of numerous TF activities…”
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A subsystems approach for parameter estimation of ODE models of hybrid systems by Georgoulas, Anastasis, Clark, Allan, Ocone, Andrea, Gilmore, Stephen, Sanguinetti, Guido

“…We present a new method for parameter identification of ODE system descriptions based on data measurements. Our method works by splitting the system into a…”
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Reconstructing transcription factor activities in hierarchical transcription network motifs by Ocone, Andrea, Sanguinetti, Guido

“…Motivation: A knowledge of the dynamics of transcription factors is fundamental to understand the transcriptional regulation mechanism. Nowadays, an…”
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Hybrid regulatory models: a statistically tractable approach to model regulatory network dynamics by Ocone, Andrea, Millar, Andrew J, Sanguinetti, Guido

“…Computational modelling of the dynamics of gene regulatory networks is a central task of systems biology. For networks of small/medium scale, the dominant…”
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Variational inference for gaussian-jump processes with application in gene regulation by Ocone, Andrea

“…In the last decades, the explosion of data from quantitative techniques has revolutionised our understanding of biological processes. In this scenario,…”
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A stochastic hybrid model of a biological filter by Ocone, Andrea, Sanguinetti, Guido

“…EPTCS 124, 2013, pp. 100-108 We present a hybrid model of a biological filter, a genetic circuit which removes fast fluctuations in the cell's internal…”
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A subsystems approach for parameter estimation of ODE models of hybrid systems by Georgoulas, Anastasis, Clark, Allan, Ocone, Andrea, Gilmore, Stephen, Sanguinetti, Guido

“…EPTCS 92, 2012, pp. 30-41 We present a new method for parameter identification of ODE system descriptions based on data measurements. Our method works by…”
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