Search Results - "Nuccio, Erin E."

Differentiation strategies of soil rare and abundant microbial taxa in response to changing climatic regimes by Liang, Yuting, Xiao, Xian, Nuccio, Erin E., Yuan, Mengting, Zhang, Na, Xue, Kai, Cohan, Frederick M., Zhou, Jizhong, Sun, Bo

“…Summary Despite the important roles of soil microbes, especially the most diverse rare taxa in maintaining community diversity and multifunctionality, how…”
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Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil by Blazewicz, Steven J., Hungate, Bruce A., Koch, Benjamin J., Nuccio, Erin E., Morrissey, Ember, Brodie, Eoin L., Schwartz, Egbert, Pett-Ridge, Jennifer, Firestone, Mary K.

“…Microbial activity increases after rewetting dry soil, resulting in a pulse of carbon mineralization and nutrient availability. The biogeochemical responses to…”
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Active virus-host interactions at sub-freezing temperatures in Arctic peat soil by Trubl, Gareth, Kimbrel, Jeffrey A, Liquet-Gonzalez, Jose, Nuccio, Erin E, Weber, Peter K, Pett-Ridge, Jennifer, Jansson, Janet K, Waldrop, Mark P, Blazewicz, Steven J

“…Winter carbon loss in northern ecosystems is estimated to be greater than the average growing season carbon uptake and is primarily driven by microbial…”
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HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the hyphosphere of arbuscular mycorrhizal fungi by Nuccio, Erin E, Blazewicz, Steven J, Lafler, Marissa, Campbell, Ashley N, Kakouridis, Anne, Kimbrel, Jeffrey A, Wollard, Jessica, Vyshenska, Dariia, Riley, Robert, Tomatsu, Andy, Hestrin, Rachel, Malmstrom, Rex R, Firestone, Mary, Pett-Ridge, Jennifer

“…Linking the identity of wild microbes with their ecophysiological traits and environmental functions is a key ambition for microbial ecologists. Of many…”
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Quantifying the effects of switchgrass (Panicum virgatum) on deep organic C stocks using natural abundance 14C in three marginal soils by Slessarev, Eric W., Nuccio, Erin E., McFarlane, Karis J., Ramon, Christina E., Saha, Malay, Firestone, Mary K., Pett‐Ridge, Jennifer

“…Perennial bioenergy crops have been shown to increase soil organic carbon (SOC) stocks, potentially offsetting anthropogenic C emissions. The effects of…”
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Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development by Sieradzki, Ella T, Nuccio, Erin E, Pett-Ridge, Jennifer, Firestone, Mary K

“…Plant roots modulate microbial nitrogen (N) cycling by regulating the supply of root-derived carbon and nitrogen uptake. These differences in resource…”
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Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities by Nicolas, Alexa M., Jaffe, Alexander L., Nuccio, Erin E., Taga, Michiko E., Firestone, Mary K., Banfield, Jillian F.

“…Candidate Phyla Radiation (CPR) bacteria and nanoarchaea populate most ecosystems but are rarely detected in soil. We concentrated particles of less than 0.2…”
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Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems by Greenlon, Alex, Sieradzki, Ella, Zablocki, Olivier, Koch, Benjamin J, Foley, Megan M, Kimbrel, Jeffrey A, Hungate, Bruce A, Blazewicz, Steven J, Nuccio, Erin E, Sun, Christine L, Chew, Aaron, Mancilla, Cynthia-Jeanette, Sullivan, Matthew B, Firestone, Mary, Pett-Ridge, Jennifer, Banfield, Jillian F

“…The growth and physiology of soil microorganisms, which play vital roles in biogeochemical cycling, are shaped by both current and historical soil…”
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The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages by Shi, Shengjing, Nuccio, Erin E., Shi, Zhou J., He, Zhili, Zhou, Jizhong, Firestone, Mary K.

“…While interactions between roots and microorganisms have been intensively studied, we know little about interactions among root‐associated microbes. We used…”
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Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil by Starr, Evan P., Nuccio, Erin E., Pett-Ridge, Jennifer, Banfield, Jillian F., Firestone, Mary K.

“…Viruses impact nearly all organisms on Earth, with ripples of influence in agriculture, health, and biogeochemical processes. However, very little is known…”
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A standardized quantitative analysis strategy for stable isotope probing metagenomics by Vyshenska, Dariia, Sampara, Pranav, Singh, Kanwar, Tomatsu, Andy, Kauffman, W Berkeley, Nuccio, Erin E, Blazewicz, Steven J, Pett-Ridge, Jennifer, Louie, Katherine B, Varghese, Neha, Kellom, Matthew, Clum, Alicia, Riley, Robert, Roux, Simon, Eloe-Fadrosh, Emiley A, Ziels, Ryan M, Malmstrom, Rex R

“…Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic…”
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Initial soil organic carbon stocks govern changes in soil carbon: Reality or artifact? by Slessarev, Eric W., Mayer, Allegra, Kelly, Courtland, Georgiou, Katerina, Pett‐Ridge, Jennifer, Nuccio, Erin E.

“…Changes in soil organic carbon (SOC) storage have the potential to affect global climate; hence identifying environments with a high capacity to gain or lose…”
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Rock weathering controls the potential for soil carbon storage at a continental scale by Slessarev, Eric W., Chadwick, Oliver A., Sokol, Noah W., Nuccio, Erin E., Pett-Ridge, Jennifer

“…As rock-derived primary minerals weather to form soil, they create reactive, poorly crystalline minerals that bind and store organic carbon. By implication,…”
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Niche differentiation is spatially and temporally regulated in the rhizosphere by Nuccio, Erin E., Starr, Evan, Karaoz, Ulas, Brodie, Eoin L., Zhou, Jizhong, Tringe, Susannah G., Malmstrom, Rex R., Woyke, Tanja, Banfield, Jillian F., Firestone, Mary K., Pett-Ridge, Jennifer

“…The rhizosphere is a hotspot for microbial carbon transformations, and is the entry point for root polysaccharides and polymeric carbohydrates that are…”
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An arbuscular mycorrhizal fungus significantly modifies the soil bacterial community and nitrogen cycling during litter decomposition by Nuccio, Erin E., Hodge, Angela, Pett-Ridge, Jennifer, Herman, Donald J., Weber, Peter K., Firestone, Mary K.

“…Summary Arbuscular mycorrhizal fungi (AMF) perform an important ecosystem service by improving plant nutrient capture from soil, yet little is known about how…”
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Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass by Sieradzki, Ella T., Nuccio, Erin E., Pett-Ridge, Jennifer, Firestone, Mary K.

“…Nitrogen (N) is frequently limiting to plant growth, in part because most soil N is present as polymeric organic compounds that are not readily taken up by…”
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Plant-associated fungi support bacterial resilience following water limitation by Hestrin, Rachel, Kan, Megan, Lafler, Marissa, Wollard, Jessica, Kimbrel, Jeffrey A., Ray, Prasun, Blazewicz, Steven J., Stuart, Rhona, Craven, Kelly, Firestone, Mary, Nuccio, Erin E., Pett-Ridge, Jennifer

“…Drought disrupts soil microbial activity and many biogeochemical processes. Although plant-associated fungi can support plant performance and nutrient cycling…”
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Climate and edaphic controllers influence rhizosphere community assembly for a wild annual grass by Nuccio, Erin E., Anderson-Furgeson, James, Estera, Katerina Y., Pett-Ridge, Jennifer, de Valpine, Perry, Brodie, Eoin L., Firestone, Mary K.

“…The interface between roots and soil, known as the rhizosphere, is a dynamic habitat in the soil ecosystem. Unraveling the factors that control rhizosphere…”
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Correction to: Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass by Sieradzki, Ella T., Nuccio, Erin E., Pett-Ridge, Jennifer, Firestone, Mary K.

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Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral‐associated organic matter by Kakouridis, Anne, Yuan, Mengting, Nuccio, Erin E., Hagen, John A., Fossum, Christina A., Moore, Madeline L., Estera‐Molina, Katerina Y., Nico, Peter S., Weber, Peter K., Pett‐Ridge, Jennifer, Firestone, Mary K.

“…Summary Arbuscular mycorrhizal fungi (AMF) transport substantial plant carbon (C) that serves as a substrate for soil organisms, a precursor of soil organic…”
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