Search Results - "Noy, Natalya F"

Where to publish and find ontologies? A survey of ontology libraries by d’Aquin, Mathieu, Noy, Natalya F.

“…One of the key promises of the Semantic Web is its potential to enable and facilitate data interoperability. The ability of data providers and application…”
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The PROMPT suite: interactive tools for ontology merging and mapping by Noy, Natalya F, Musen, Mark A

“…Researchers in the ontology-design field have developed the content for ontologies in many domain areas. This distributed nature of ontology development has…”
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NCBO Resource Index: Ontology-based search and mining of biomedical resources by Jonquet, Clement, LePendu, Paea, Falconer, Sean, Coulet, Adrien, Noy, Natalya F., Musen, Mark A., Shah, Nigam H.

“…► The NCBO presents an ontology-based index of various biomedical data resources. ► We have automatically indexed 22 data resources using more than 200…”
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How orthogonal are the OBO Foundry ontologies? by Ghazvinian, Amir, Noy, Natalya F, Musen, Mark A

“…Ontologies in biomedicine facilitate information integration, data exchange, search and query of biomedical data, and other critical knowledge-intensive tasks…”
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National Center for Biomedical Ontology: advancing biomedicine through structured organization of scientific knowledge by Rubin, Daniel L, Lewis, Suzanna E, Mungall, Chris J, Misra, Sima, Westerfield, Monte, Ashburner, Michael, Sim, Ida, Chute, Christopher G, Solbrig, Harold, Storey, Margaret-Anne, Smith, Barry, Day-Richter, John, Noy, Natalya F, Musen, Mark A

“…The National Center for Biomedical Ontology is a consortium that comprises leading informaticians, biologists, clinicians, and ontologists, funded by the…”
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BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications by Whetzel, Patricia L., Noy, Natalya F., Shah, Nigam H., Alexander, Paul R., Nyulas, Csongor, Tudorache, Tania, Musen, Mark A.

“…The National Center for Biomedical Ontology (NCBO) is one of the National Centers for Biomedical Computing funded under the NIH Roadmap Initiative…”
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BioPortal: ontologies and integrated data resources at the click of a mouse by Noy, Natalya F, Shah, Nigam H, Whetzel, Patricia L, Dai, Benjamin, Dorf, Michael, Griffith, Nicholas, Jonquet, Clement, Rubin, Daniel L, Storey, Margaret-Anne, Chute, Christopher G, Musen, Mark A

“…Biomedical ontologies provide essential domain knowledge to drive data integration, information retrieval, data annotation, natural-language processing and…”
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The National Center for Biomedical Ontology by Musen, Mark A, Noy, Natalya F, Shah, Nigam H, Whetzel, Patricia L, Chute, Christopher G, Story, Margaret-Anne, Smith, Barry

“…The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain…”
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WebProtégé: a collaborative Web-based platform for editing biomedical ontologies by Horridge, Matthew, Tudorache, Tania, Nuylas, Csongor, Vendetti, Jennifer, Noy, Natalya F, Musen, Mark A

“…WebProtégé is an open-source Web application for editing OWL 2 ontologies. It contains several features to aid collaboration, including support for the…”
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Biomedical ontologies: a functional perspective by Rubin, Daniel L., Shah, Nigam H., Noy, Natalya F.

“…The information explosion in biology makes it difficult for researchers to stay abreast of current biomedical knowledge and to make sense of the massive…”
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Using the wisdom of the crowds to find critical errors in biomedical ontologies: a study of SNOMED CT by Mortensen, Jonathan M, Minty, Evan P, Januszyk, Michael, Sweeney, Timothy E, Rector, Alan L, Noy, Natalya F, Musen, Mark A

“…Objectives The verification of biomedical ontologies is an arduous process that typically involves peer review by subject-matter experts. This work evaluated…”
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Crowdsourcing the verification of relationships in biomedical ontologies by Mortensen, Jonathan M, Musen, Mark A, Noy, Natalya F

“…Biomedical ontologies are often large and complex, making ontology development and maintenance a challenge. To address this challenge, scientists use automated…”
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Discovering Beaten Paths in Collaborative Ontology-Engineering Projects using Markov Chains by Walk, Simon, Singer, Philipp, Strohmaier, Markus, Tudorache, Tania, Musen, Mark A., Noy, Natalya F.

“…[Display omitted] •We model usage patterns of five different ontology-engineering projects.•Users work in micro-workflows and specific user-roles can be…”
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Ontology Evolution: Not the Same as Schema Evolution by Noy, Natalya F, Klein, Michel

“…As ontology development becomes a more ubiquitous and collaborative process, ontology versioning and evolution becomes an important area of ontology research…”
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Creating mappings for ontologies in biomedicine: simple methods work by Ghazvinian, Amir, Noy, Natalya F, Musen, Mark A

“…Creating mappings between concepts in different ontologies is a critical step in facilitating data integration. In recent years, researchers have developed…”
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The evolution of Protégé: an environment for knowledge-based systems development by Gennari, John H, Musen, Mark A, Fergerson, Ray W, Grosso, William E, Crubézy, Monica, Eriksson, Henrik, Noy, Natalya F, Tu, Samson W

“…The Protégé project has come a long way since Mark Musen first built the Protégé meta-tool for knowledge-based systems in 1987. The original tool was a small…”
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Creating Semantic Web contents with Protege-2000 by Noy, N.F., Sintek, M., Decker, S., Crubezy, M., Fergerson, R.W., Musen, M.A.

“…As researchers continue to create new languages in the hope of developing a Semantic Web, they still lack consensus on a standard. The authors describe how…”
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SWEET ontology coverage for earth system sciences by DiGiuseppe, Nicholas, Pouchard, Line C., Noy, Natalya F.

“…Scientists in the Earth and Environmental Sciences (EES) domain increasingly use ontologies to analyze and integrate their data. For example, the NASA’s SWEET…”
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How ontologies are made: Studying the hidden social dynamics behind collaborative ontology engineering projects by Strohmaier, Markus, Walk, Simon, Pöschko, Jan, Lamprecht, Daniel, Tudorache, Tania, Nyulas, Csongor, Musen, Mark A., Noy, Natalya F.

“…Traditionally, evaluation methods in the field of semantic technologies have focused on the end result of ontology engineering efforts, mainly, on evaluating…”
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The CKC Challenge: Exploring Tools for Collaborative Knowledge Construction by Noy, N.F., Chugh, A., Alani, H.

“…A new generation of tools supports the integration of Web 2.0 and semantic Web approaches. Some of these tools-such as Semantic MediaWiki…”
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