Search Results - "Nopakun, Amanda"
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Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin for the PH Domain
Published in Journal of molecular biology (12-02-2010)“…Pleckstrin homology (PH) domains have been identified only in eukaryotic proteins to date. We have determined crystal structures for three members of an…”
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Structural and Functional Characterizations of SsgB, a Conserved Activator of Developmental Cell Division in Morphologically Complex Actinomycetes
Published in The Journal of biological chemistry (11-09-2009)“…SsgA-like proteins (SALPs) are a family of homologous cell division-related proteins that occur exclusively in morphologically complex actinomycetes. We show…”
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Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 Å resolution
Published in Proteins, structure, function, and bioinformatics (01-05-2009)“…ECX21941 represents a very large family (over 600 members) of novel, ocean metagenome‐specific proteins identified by clustering of the dataset from the Global…”
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A Structural Basis for the Regulatory Inactivation of DnaA
Published in Journal of molecular biology (16-01-2009)“…Regulatory inactivation of DnaA is dependent on Hda ( homologous to Dna A), a protein homologous to the AAA+ ( ATPases associated with diverse cellular…”
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5
What is the most effective treatment of acid reflux in children?
Published in Evidence-based practice : patient-oriented evidence that matters (01-11-2020)Get full text
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6
Structure of the γ-d-glutamyl-l-diamino acid endopeptidase YkfC from Bacillus cereus in complex with l-Ala-γ-d-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…Dipeptidyl‐peptidase VI from Bacillus sphaericus and YkfC from Bacillus subtilis have both previously been characterized as highly specific…”
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The crystal structure of a bacterial Sufu‐like protein defines a novel group of bacterial proteins that are similar to the N‐terminal domain of human Sufu
Published in Protein science (01-11-2010)“…Sufu (Suppressor of Fused), a two‐domain protein, plays a critical role in regulating Hedgehog signaling and is conserved from flies to humans. A few bacterial…”
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Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 Å resolution
Published in Proteins, structure, function, and bioinformatics (01-05-2009)Get full text
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Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…Membrane‐attack complex/perforin (MACPF) proteins are transmembrane pore‐forming proteins that are important in both human immunity and the virulence of…”
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10
Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…The crystal structure of the Bacteroides thetaiotaomicron protein BT_3984 was determined to a resolution of 1.7 Å and was the first structure to be determined…”
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The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…Proteins that contain the DUF2874 domain constitute a new Pfam family PF11396. Members of this family have predominantly been identified in microbes found in…”
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The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…Proteins with the DUF2063 domain constitute a new Pfam family, PF09836. The crystal structure of a member of this family, NGO1945 from Neisseria gonorrhoeae,…”
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Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved [alpha]+[beta] core domain and an auxiliary C-terminal treble-clef zinc finger
Published in Acta crystallographica. Section F, Structural biology communications (01-10-2010)“…Examination of the genomic context for members of the FmdE Pfam family (PF02663), such as the protein encoded by the fmdE gene from the methanogenic archaeon…”
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The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…KPN03535 (gi|152972051) is a putative lipoprotein of unknown function that is secreted by Klebsiella pneumoniae MGH 78578. The crystal structure reveals that…”
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Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…The crystal structures of BB2672 and SPO0826 were determined to resolutions of 1.7 and 2.1 Å by single‐wavelength anomalous dispersion and multiple‐wavelength…”
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Structure of Bacteroides thetaiotaomicron BT2081 at 2.05Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism
Published in Acta crystallographica. Section F, Structural biology communications (01-10-2010)“…BT2081 from Bacteroides thetaiotaomicron (GenBank accession code NP_810994.1) is a member of a novel protein family consisting of over 160 members, most of…”
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Structure of the [gamma]-d-glutamyl-l-diamino acid endopeptidase YkfC from Bacillus cereus in complex with l-Ala-[gamma]-d-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
Published in Acta crystallographica. Section F, Structural biology communications (01-10-2010)“…Dipeptidyl-peptidase VI from Bacillus sphaericus and YkfC from Bacillus subtilis have both previously been characterized as highly specific…”
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18
A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2Å resolution
Published in Acta crystallographica. Section F, Structural biology communications (01-10-2010)“…BT1062 from Bacteroides thetaiotaomicron is a homolog of Mfa2 (PGN0288 or PG0179), which is a component of the minor fimbriae in Porphyromonas gingivalis. The…”
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A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 Å resolution
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…BT1062 from Bacteroides thetaiotaomicron is a homolog of Mfa2 (PGN0288 or PG0179), which is a component of the minor fimbriae in Porphyromonas gingivalis. The…”
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20
Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved a+b core domain and an auxiliary C-terminal treble-clef zinc finger
Published in Acta crystallographica. Section F, Structural biology and crystallization communications (01-10-2010)“…Examination of the genomic context for members of the FmdE Pfam family (PF02663), such as the protein encoded by the fmdE gene from the methanogenic archaeon…”
Get full text
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