Search Results - "Noid, W.G."

Rigorous Progress in Coarse-Graining by Noid, W.G, Szukalo, Ryan J, Kidder, Katherine M, Lesniewski, Maria C

“…Low-resolution coarse-grained (CG) models provide remarkable computational and conceptual advantages for simulating soft materials. In principle, bottom-up CG…”
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BOCS: Bottom-up Open-source Coarse-graining Software by Dunn, Nicholas J. H, Lebold, Kathryn M, DeLyser, Michael R, Rudzinski, Joseph F, Noid, W.G

“…We present the BOCS toolkit as a suite of open source software tools for parametrizing bottom-up coarse-grained (CG) models to accurately reproduce structural…”
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Chapter 7 Multiscale Simulation of Membranes and Membrane Proteins: Connecting Molecular Interactions to Mesoscopic Behavior by Ayton, Gary S., Izvekov, Sergei, Noid, W.G., Voth, Gregory A.

“…Current progress in the field of the multiscale simulation of membranes is presented. A general survey of various simulation methods, and how they can relate…”
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Simple Simulation Model for Exploring the Effects of Solvent and Structure on Asphaltene Aggregation by Dunn, Nicholas J. H, Gutama, Besha, Noid, W. G

“…Asphaltenes are operationally defined as the fraction of crude oil that is soluble in toluene but insoluble in n-heptane. According to the Yen–Mullins model,…”
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MD Simulations of the dsRBP DGCR8 Reveal Correlated Motions that May Aid pri-miRNA Binding by Wostenberg, Christopher, Noid, W.G., Showalter, Scott A.

“…Over the past decade, microRNAs (miRNAs) have been shown to affect gene regulation by basepairing with messenger RNA, and their misregulation has been directly…”
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