Search Results - "Nishio, Motohide"

Including dominance effects in the genomic BLUP method for genomic evaluation by Nishio, Motohide, Satoh, Masahiro

“…We evaluated the performance of GBLUP including dominance genetic effect (GBLUP-D) by estimating variances and predicting genetic merits in a computer…”
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Performance of the No-U-Turn sampler in multi-trait variance component estimation using genomic data by Nishio, Motohide, Arakawa, Aisaku

“…Multi-trait genetic parameter estimation is an important topic for target traits with few records and with a low heritability and when the genetic correlation…”
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Performance of Hamiltonian Monte Carlo and No-U-Turn Sampler for estimating genetic parameters and breeding values by Nishio, Motohide, Arakawa, Aisaku

“…Hamiltonian Monte Carlo is one of the algorithms of the Markov chain Monte Carlo method that uses Hamiltonian dynamics to propose samples that follow a target…”
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Comparing pedigree and genomic inbreeding coefficients, and inbreeding depression of reproductive traits in Japanese Black cattle by Nishio, Motohide, Inoue, Keiichi, Ogawa, Shinichiro, Ichinoseki, Kasumi, Arakawa, Aisaku, Fukuzawa, Yo, Okamura, Toshihiro, Kobayashi, Eiji, Taniguchi, Masaaki, Oe, Mika, Ishii, Kazuo

“…Pedigree-based inbreeding coefficients have been generally included in statistical models for genetic evaluation of Japanese Black cattle. The use of genomic…”
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Evaluating the performance of genomic prediction accounting for effects of single nucleotide polymorphism markers in reproductive traits of Japanese Black cattle by Nishio, Motohide, Arakawa, Aisaku, Inoue, Keiichi, Ichinoseki, Kasumi, Kobayashi, Eiji, Okamura, Toshihiro, Fukuzawa, Yo, Ogawa, Shinichiro, Taniguchi, Masaaki, Oe, Mika, Takeda, Masayuki, Ishii, Kazuo

“…We examined the prediction accuracies of genomic best linear unbiased prediction (GBLUP), various weighted GBLUP according to the degrees of marker effects…”
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Inferring phenotypic causal structure among farrowing and weaning traits in pigs by Okamura, Toshihiro, Ishii, Kazuo, Nishio, Motohide, Rosa, Guilherme J. M., Satoh, Masahiro, Sasaki, Osamu

“…Direct selection for litter size or weight at weaning in pigs is often hindered by external interventions such as cross‐fostering. The objective of this study…”
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Differential Metabolomics Profiles Identified by CE-TOFMS between High and Low Intramuscular Fat Amount in Fattening Pigs by Taniguchi, Masaaki, Arakawa, Aisaku, Nishio, Motohide, Okamura, Toshihiro, Ohnishi, Chika, Kadowaki, Kouen, Kohira, Kimiko, Homma, Fumika, Matsumoto, Kazunori, Ishii, Kazuo

“…The amount of intramuscular fat (IMF) present in the loin eye area is one of the most important characteristics of high-quality pork. IMF measurements are…”
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Parameters affecting genome simulation for evaluating genomic selection method by Nishio, Motohide, Satoh, Masahiro

“…The present study investigated the parameter settings for obtaining a simulated genome at steady state of allele frequency (mutation–drift equilibrium) and…”
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Genomic best linear unbiased prediction method including imprinting effects for genomic evaluation by Nishio, Motohide, Satoh, Masahiro

“…Genomic best linear unbiased prediction (GBLUP) is a statistical method used to predict breeding values using single nucleotide polymorphisms for selection in…”
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Plateau‐linear reaction norm model analysis of number born alive in purebred Landrace pigs using meteorological data in Japan by Ogawa, Shinichiro, Okamura, Toshihiro, Fukuzawa, Yo, Nishio, Motohide, Ishii, Kazuo, Kimata, Makoto, Tomiyama, Masamitsu, Satoh, Masahiro

“…We performed a plateau‐linear reaction norm model (RNM) analysis of number born alive (NBA) in purebred Landrace pigs, where breeding value changes according…”
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Effects of parent‐of‐origin models with different pedigree information on beef carcass traits and fatty acid composition in Japanese Black cattle by Inoue, Keiichi, Nishio, Motohide, Shoji, Noriaki, Hirooka, Hiroyuki

“…Genomic imprinting should be considered in animal breeding systems to avoid lead in bias in genetic parameter estimation. The objective of this study was to…”
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Evaluation of genomic prediction considering non-additive genetic effects on fatty acid traits of Japanese Black cattle by Oyama, Hidemi, Nishio, Motohide, Shibata, Eri, Takemyo, Hinaka, Ichinoseki, Kasumi, Ishii, Kazuo

“…Genomic prediction was conducted using 2494 Japanese Black cattle from Hiroshima Prefecture and both single-nucleotide polymorphism information and phenotype…”
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Reaction-norm animal model analysis of average daily gain heat tolerance in purebred Duroc pigs by Fukuzawa, Yo, Ogawa, Shinichiro, Okamura, Toshihiro, Nishio, Motohide, Ishii, Kazuo, Takahashi, Hiroshi, Satoh, Masahiro

“…The present study aimed to genetically improve growth performance under high-heat environments by specifically designing a reaction-norm animal model (RNAM)…”
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Hamiltonian Monte Carlo method for estimating variance components by Arakawa, Aisaku, Hayashi, Takeshi, Taniguchi, Masaaki, Mikawa, Satoshi, Nishio, Motohide

“…A Hamiltonian Monte Carlo algorithm is a Markov chain Monte Carlo method, and the method has a potential to improve estimating parameters effectively…”
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Impacts of genotyping strategies on long‐term genetic response in genomic selection by Nishio, Motohide, Satoh, Masahiro

“…The present study investigated the effects of the choices of animals of reference populations on long‐term responses to genomic selection. Simulated…”
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Including Dominance Effects in the Genomic BLUP Method for Genomic Evaluation: e85792 by Nishio, Motohide, Satoh, Masahiro

“…We evaluated the performance of GBLUP including dominance genetic effect (GBLUP-D) by estimating variances and predicting genetic merits in a computer…”
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Application of linear and machine learning models to genomic prediction of fatty acid composition in Japanese Black cattle by Nishio, Motohide, Inoue, Keiichi, Arakawa, Aisaku, Ichinoseki, Kasumi, Kobayashi, Eiji, Okamura, Toshihiro, Fukuzawa, Yo, Ogawa, Shinichiro, Taniguchi, Masaaki, Oe, Mika, Takeda, Masayuki, Kamata, Takehiro, Konno, Masaru, Takagi, Michihiro, Sekiya, Mario, Matsuzawa, Tamotsu, Inoue, Yoshinobu, Watanabe, Akihiro, Kobayashi, Hiroshi, Shibata, Eri, Ohtani, Akihumi, Yazaki, Ryu, Nakashima, Ryotaro, Ishii, Kazuo

“…We collected 3180 records of oleic acid (C18:1) and monounsaturated fatty acid (MUFA) measured using gas chromatography (GC) and 6960 records of C18:1 and MUFA…”
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