Search Results - "Nishida, Hiroki"

3D reconstruction of structures of hatched larva and young juvenile of the larvacean Oikopleura dioica using SBF-SEM by Nishida, Hiroki, Ohno, Nobuhiko, Caicci, Federico, Manni, Lucia

“…The larvacean Oikopleura dioica is a planktonic chordate and an emerging model organism with a short life cycle of 5 days that belongs toTunicata…”
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Cell lineages and fate maps in tunicates: conservation and modification by Nishida, Hiroki, Stach, Thomas

“…Comparison of features of the cell lineages and fate maps of early embryos between related species is useful in inferring developmental mechanisms and amenable…”
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Specification of embryonic axis and mosaic development in ascidians by Nishida, Hiroki

“…Setting up future body axes is the first important event before and at the beginning of embryogenesis. The ascidian embryo is a classic model that has been…”
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Ascidian gastrulation and blebbing activity of isolated endoderm blastomeres by Nishida, Haruka Y., Hamada, Kaho, Koshita, Mika, Ohta, Yuki, Nishida, Hiroki

“…Gastrulation is the first dynamic cell movement during embryogenesis. Endoderm and mesoderm cells are internalized into embryos during this process. Ascidian…”
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REGULATOR: a database of metazoan transcription factors and maternal factors for developmental studies by Wang, Kai, Nishida, Hiroki

“…Genes encoding transcription factors that constitute gene-regulatory networks and maternal factors accumulating in egg cytoplasm are two classes of essential…”
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Eccentric position of the germinal vesicle and cortical flow during oocyte maturation specify the animal-vegetal axis of ascidian embryos by Tokuhisa, Masumi, Muto, Miyuki, Nishida, Hiroki

“…The animal-vegetal (A-V) axis is already set in unfertilized eggs. It plays crucial roles in coordinating germ-layer formation. However, how the A-V axis is…”
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Control of Pem protein level by localized maternal factors for transcriptional regulation in the germline of the ascidian, Halocynthia roretzi by Miyaoku, Kaori, Nakamoto, Ayaki, Nishida, Hiroki, Kumano, Gaku

“…Localized maternal mRNAs play important roles in embryogenesis, e.g. the establishment of embryonic axes and the developmental cell fate specification, in…”
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Protein phosphatase 2A is essential to maintain meiotic arrest, and to prevent Ca2+ burst at spawning and eventual parthenogenesis in the larvacean Oikopleura dioica by Matsuo, Masaki, Onuma, Takeshi A., Omotezako, Tatsuya, Nishida, Hiroki

“…Unfertilized eggs of most animals are arrested at a certain point in the meiotic cell cycles. Reinitiation of meiosis and the start of embryogenesis are…”
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ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets by Brozovic, Matija, Dantec, Christelle, Dardaillon, Justine, Dauga, Delphine, Faure, Emmanuel, Gineste, Mathieu, Louis, Alexandra, Naville, Magali, Nitta, Kazuhiro R, Piette, Jacques, Reeves, Wendy, Scornavacca, Céline, Simion, Paul, Vincentelli, Renaud, Bellec, Maelle, Aicha, Sameh Ben, Fagotto, Marie, Guéroult-Bellone, Marion, Haeussler, Maximilian, Jacox, Edwin, Lowe, Elijah K, Mendez, Mickael, Roberge, Alexis, Stolfi, Alberto, Yokomori, Rui, Brown, C Titus, Cambillau, Christian, Christiaen, Lionel, Delsuc, Frédéric, Douzery, Emmanuel, Dumollard, Rémi, Kusakabe, Takehiro, Nakai, Kenta, Nishida, Hiroki, Satou, Yutaka, Swalla, Billie, Veeman, Michael, Volff, Jean-Nicolas, Lemaire, Patrick

“…Abstract ANISEED (www.aniseed.cnrs.fr) is the main model organism database for tunicates, the sister-group of vertebrates. This release gives access to…”
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Expression and Functional Analyses of Ectodermal Transcription Factors FoxJ-r, SoxF, and SP8/9 in Early Embryos of the Ascidian Halocynthia roretzi by Shih, Yu, Wang, Kai, Kumano, Gaku, Nishida, Hiroki

“…The spatiotemporal expression of zygotic genes is regulated by transcription factors, which mediate cell fate decision and morphogenesis. Investigation of the…”
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A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left–right patterning by Onuma, Takeshi A., Hayashi, Momoko, Gyoja, Fuki, Kishi, Kanae, Wang, Kai, Nishida, Hiroki

“…Larvaceans are chordates with a tadpole-like morphology. In contrast to most chordates of which early embryonic morphology is bilaterally symmetric and the…”
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Rubicon-regulated beta-1 adrenergic receptor recycling protects the heart from pressure overload by Akazawa, Yasuhiro, Taneike, Manabu, Ueda, Hiromichi, Kitazume-Taneike, Rika, Murakawa, Tomokazu, Sugihara, Ryuta, Yorifuji, Hiroki, Nishida, Hiroki, Mine, Kentaro, Hioki, Ayana, Omiya, Shigemiki, Nakayama, Hiroyuki, Yamaguchi, Osamu, Yoshimori, Tamotsu, Sakata, Yasushi, Otsu, Kinya

“…Heart failure has high morbidity and mortality in the developed countries. Autophagy is important for the quality control of proteins and organelles in the…”
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Patterning and morphogenesis of the intricate but stereotyped oikoplastic epidermis of the appendicularian, Oikopleura dioica by Kishi, Kanae, Hayashi, Momoko, Onuma, Takeshi A., Nishida, Hiroki

“…Mechanisms for morphogenetic processes that generate complex patterns in a reproducible manner remain elusive. Live imaging provides a powerful tool to record…”
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Internal and external morphology of adults of the appendicularian, Oikopleura dioica: an SEM study by Onuma, Takeshi A., Isobe, Miho, Nishida, Hiroki

“…The appendicularian, Oikopleura dioica , is a planktonic tunicate that retains a swimming tadpole shape throughout its life. It has relatively few cells and…”
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ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates by Dardaillon, Justine, Dauga, Delphine, Simion, Paul, Faure, Emmanuel, Onuma, Takeshi A, DeBiasse, Melissa B, Louis, Alexandra, Nitta, Kazuhiro R, Naville, Magali, Besnardeau, Lydia, Reeves, Wendy, Wang, Kai, Fagotto, Marie, Guéroult-Bellone, Marion, Fujiwara, Shigeki, Dumollard, Rémi, Veeman, Michael, Volff, Jean-Nicolas, Roest Crollius, Hugues, Douzery, Emmanuel, Ryan, Joseph F, Davidson, Bradley, Nishida, Hiroki, Dantec, Christelle, Lemaire, Patrick

“…Abstract ANISEED (https://www.aniseed.cnrs.fr) is the main model organism database for the worldwide community of scientists working on tunicates, the…”
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Mouth opening is mediated by separation of dorsal and ventral daughter cells of the lip precursor cells in the larvacean, Oikopleura dioica by Morita, Ryo, Onuma, Takeshi A., Manni, Lucia, Ohno, Nobuhiko, Nishida, Hiroki

“…Mouth formation involves the processes of mouth opening, formation of the oral cavity, and the development of associated sensory organs. In deuterostomes, the…”
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Lysophosphatidylserine induces necrosis in pressure overloaded male mouse hearts via G protein coupled receptor 34 by Sugihara, Ryuta, Taneike, Manabu, Murakawa, Tomokazu, Tamai, Takahito, Ueda, Hiromichi, Kitazume-Taneike, Rika, Oka, Takafumi, Akazawa, Yasuhiro, Nishida, Hiroki, Mine, Kentaro, Hioki, Ayana, Omi, Jumpei, Omiya, Shigemiki, Aoki, Junken, Ikeda, Kazutaka, Nishida, Kazuhiko, Arita, Makoto, Yamaguchi, Osamu, Sakata, Yasushi, Otsu, Kinya

“…Heart failure is a leading cause of mortality in developed countries. Cell death is a key player in the development of heart failure. Calcium-independent…”
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Ascidian embryonic development: An emerging model system for the study of cell fate specification in chordates by Kumano, Gaku, Nishida, Hiroki

“…The ascidian tadpole larva represents the basic body plan of all chordates in a relatively small number of cells and tissue types. Although it had been…”
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Polarization of PI3K Activity Initiated by Ooplasmic Segregation Guides Nuclear Migration in the Mesendoderm by Takatori, Naohito, Oonuma, Kouhei, Nishida, Hiroki, Saiga, Hidetoshi

“…Asymmetric localization of RNA is a widely observed mechanism of cell polarization. Using embryos of the ascidian, Halocynthia roretzi, we previously showed…”
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Plasticity of Animal Genome Architecture Unmasked by Rapid Evolution of a Pelagic Tunicate by Denoeud, France, Henriet, Simon, Mungpakdee, Sutada, Aury, Jean-Marc, Da Silva, Corinne, Brinkmann, Henner, Mikhaleva, Jana, Olsen, Lisbeth Charlotte, Jubin, Claire, Cañestro, Cristian, Bouquet, Jean-Marie, Danks, Gemma, Poulain, Julie, Campsteijn, Coen, Adamski, Marcin, Cross, Ismael, Yadetie, Fekadu, Muffato, Matthieu, Louis, Alexandra, Butcher, Stephen, Tsagkogeorga, Georgia, Konrad, Anke, Singh, Sarabdeep, Jensen, Marit Flo, Cong, Evelyne Huynh, Eikeseth-Otteraa, Helen, Noel, Benjamin, Anthouard, Véronique, Porcel, Betina M., Kachouri-Lafond, Rym, Nishino, Atsuo, Ugolini, Matteo, Chourrout, Pascal, Nishida, Hiroki, Aasland, Rein, Huzurbazar, Snehalata, Westhof, Eric, Delsuc, Frédéric, Lehrach, Hans, Reinhardt, Richard, Weissenbach, Jean, Roy, Scott W., Artiguenave, François, Postlethwait, John H., Manak, J. Robert, Thompson, Eric M., Jaillon, Olivier, Du Pasquier, Louis, Boudinot, Pierre, Liberles, David A., Volff, Jean-Nicolas, Philippe, Hervé, Lenhard, Boris, Crollius, Hugues Roest, Wincker, Patrick, Chourrout, Daniel

“…Genomes of animals as different as sponges and humans show conservation of global architecture. Here we show that multiple genomic features including…”
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