Search Results - "Nirala, Niraj K."

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  1. 1

    Ingestion of Food Particles Regulates the Mechanosensing Misshapen-Yorkie Pathway in Drosophila Intestinal Growth by Li, Qi, Nirala, Niraj K., Nie, Yingchao, Chen, Hsi-Ju, Ostroff, Gary, Mao, Junhao, Wang, Qi, Xu, Lan, Ip, Y. Tony

    Published in Developmental cell (21-05-2018)
    “…The intestinal epithelium has a high cell turnover rate and is an excellent system to study stem cell-mediated adaptive growth. In the Drosophila midgut, the…”
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  2. 2
  3. 3

    dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data by Ou, Jianhong, Liu, Haibo, Nirala, Niraj K, Stukalov, Alexey, Acharya, Usha, Green, Michael R, Zhu, Lihua Julie

    Published in PloS one (06-11-2020)
    “…Sequence logos have been widely used as graphical representations of conserved nucleic acid and protein motifs. Due to the complexity of the amino acid (AA)…”
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  4. 4

    The Snakeskin-Mesh Complex of Smooth Septate Junction Restricts Yorkie to Regulate Intestinal Homeostasis in Drosophila by Chen, Hsi-Ju, Li, Qi, Nirala, Niraj K., Ip, Y. Tony

    Published in Stem cell reports (12-05-2020)
    “…Tight junctions in mammals and septate junctions in insects are essential for epithelial integrity. We show here that, in the Drosophila intestine, smooth…”
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  5. 5

    Survival response to increased ceramide involves metabolic adaptation through novel regulators of glycolysis and lipolysis by Nirala, Niraj K, Rahman, Motiur, Walls, Stanley M, Singh, Alka, Zhu, Lihua Julie, Bamba, Takeshi, Fukusaki, Eiichiro, Srideshikan, Sargur M, Harris, Greg L, Ip, Y Tony, Bodmer, Rolf, Acharya, Usha R

    Published in PLoS genetics (01-06-2013)
    “…The sphingolipid ceramide elicits several stress responses, however, organisms survive despite increased ceramide but how they do so is poorly understood. We…”
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    Journal Article
  6. 6

    Drosophila Sirt2/mammalian SIRT3 deacetylates ATP synthase β and regulates complex V activity by Rahman, Motiur, Nirala, Niraj K, Singh, Alka, Zhu, Lihua Julie, Taguchi, Kaori, Bamba, Takeshi, Fukusaki, Eiichiro, Shaw, Leslie M, Lambright, David G, Acharya, Jairaj K, Acharya, Usha R

    Published in The Journal of cell biology (21-07-2014)
    “…Adenosine triphosphate (ATP) synthase β, the catalytic subunit of mitochondrial complex V, synthesizes ATP. We show that ATP synthase β is deacetylated by a…”
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    Journal Article
  7. 7

    Hinfp is a guardian of the somatic genome by repressing transposable elements by Nirala, Niraj K., Li, Qi, Ghule, Prachi N., Chen, Hsi-Ju, Li, Rui, Zhu, Lihua Julie, Wang, Ruijia, Rice, Nicholas P., Mao, Junhao, Stein, Janet L., Stein, Gary S., van Wijnen, Andre J., Ip, Y. Tony

    “…Germ cells possess the Piwi-interacting RNA pathway to repress transposable elements and maintain genome stability across generations. Transposable element…”
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  8. 8

    Oncogenic Pathways and Loss of the Rab11 GTPase Synergize To Alter Metabolism in Drosophila by Nie, Yingchao, Yu, Shiyan, Li, Qi, Nirala, Niraj K, Amcheslavsky, Alla, Edwards, Yvonne J K, Shum, Patrick W, Jiang, Zhong, Wang, Wei, Zhang, Biliang, Gao, Nan, Ip, Y Tony

    Published in Genetics (Austin) (01-08-2019)
    “…Colorectal cancer is a complex disease driven by well-established mutations such as APC and other yet to be identified pathways. The GTPase Rab11 regulates…”
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    Journal Article
  9. 9

    TrpA1 is a shear stress mechanosensing channel regulating intestinal stem cell proliferation in Drosophila by Gong, Jiaxin, Nirala, Niraj K, Chen, Jiazhang, Wang, Fei, Gu, Pengyu, Wen, Qi, Ip, Y Tony, Xiang, Yang

    Published in Science advances (26-05-2023)
    “…Adult stem cells are essential for tissue maintenance and repair. Although genetic pathways for controlling adult stem cells are extensively investigated in…”
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    Journal Article
  10. 10

    The Misshapen subfamily of Ste20 kinases regulate proliferation in the aging mammalian intestinal epithelium by Li, Qi, Nirala, Niraj K., Chen, Hsi‐Ju, Nie, Yingchao, Wang, Wei, Zhang, Biliang, Czech, Michael P., Wang, Qi, Xu, Lan, Mao, Junhao, Ip, Y. Tony

    Published in Journal of cellular physiology (01-12-2019)
    “…The intestinal epithelium has a high rate of cell turn over and is an excellent system to study stem cell‐mediated tissue homeostasis. The Misshapen subfamily…”
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    Journal Article
  11. 11

    Sphingosine kinases and their metabolites modulate endolysosomal trafficking in photoreceptors by Yonamine, Ikuko, Bamba, Takeshi, Nirala, Niraj K, Jesmin, Nahid, Kosakowska-Cholody, Teresa, Nagashima, Kunio, Fukusaki, Eiichiro, Acharya, Jairaj K, Acharya, Usha

    Published in The Journal of cell biology (21-02-2011)
    “…Internalized membrane proteins are either transported to late endosomes and lysosomes for degradation or recycled to the plasma membrane. Although proteins…”
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    Journal Article
  12. 12

    Drosophila Sirt2/mammalian SIRT3 deacetylates ATP synthase [Beta] and regulates complex V activity by Rahman, Motiur, Nirala, Niraj K, Singh, Alka, Zhu, Lihua Julie, Taguchi, Kaori, Bamba, Takeshi, Fukusaki, Eiichiro, Shaw, Leslie M, Lambright, David G, Acharya, Jairaj K, Acharya, Usha R

    Published in The Journal of cell biology (21-07-2014)
    “…Adenosine triphosphate (ATP) synthase β, the catalytic subunit of mitochondrial complex V, synthesizes ATP. We show that ATP synthase β is deacetylated by a…”
    Get full text
    Journal Article
  13. 13

    Oncogenic Pathways and Loss of the Rab11 GTPase Synergize To Alter Metabolism in Drosophila by Nie, Yingchao, Yu, Shiyan, Li, Qi, Nirala, Niraj K, Amcheslavsky, Alla, Edwards, Yvonne J K, Shum, Patrick W, Jiang, Zhong, Wang, Wei, Zhang, Biliang, Gao, Nan, Ip, Y Tony

    Published in Genetics (Austin) (01-08-2019)
    “…Colorectal cancer is a complex disease driven by well-established mutations such as APC and other yet to be identified pathways. The GTPase Rab11 regulates…”
    Get full text
    Journal Article
  14. 14

    Overexpression of odc (ornithine decarboxylase) in Datura innoxia enhances the yield of scopolamine by Singh, Alka, Nirala, Niraj K., Das, Sandip, Narula, Alka, Rajam, M. V., Srivastava, P. S.

    Published in Acta physiologiae plantarum (01-11-2011)
    “…Scopolamine is widely used for its anticholinergic properties. Because of higher physiological activity and less side effects the world demand of scopolamine…”
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  15. 15

    Survival Response to Increased Ceramide Involves Metabolic Adaptation through Novel Regulators of Glycolysis and Lipolysis: e1003556 by Nirala, Niraj K, Rahman, Motiur, Walls, Stanley M, Singh, Alka, Zhu, Lihua Julie, Bamba, Takeshi, Fukusaki, Eiichiro, Srideshikan, Sargur M, Harris, Greg L, Ip, Y Tony, Bodmer, Rolf, Acharya, Usha R

    Published in PLoS genetics (01-06-2013)
    “…The sphingolipid ceramide elicits several stress responses, however, organisms survive despite increased ceramide but how they do so is poorly understood. We…”
    Get full text
    Journal Article