Search Results - "Nielsen, Jens"
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Systems Biology of Metabolism
Published in Annual review of biochemistry (20-06-2017)“…Metabolism is highly complex and involves thousands of different connected reactions; it is therefore necessary to use mathematical models for holistic…”
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Yeast Systems Biology: Model Organism and Cell Factory
Published in Biotechnology journal (01-09-2019)“…For thousands of years, the yeast Saccharomyces cerevisiae (S. cerevisiae) has served as a cell factory for the production of bread, beer, and wine. In more…”
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Systems Biology of Metabolism: A Driver for Developing Personalized and Precision Medicine
Published in Cell metabolism (07-03-2017)“…Systems biology uses mathematical models to analyze large datasets and simulate system behavior. It enables integrative analysis of different types of data and…”
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Energy metabolism controls phenotypes by protein efficiency and allocation
Published in Proceedings of the National Academy of Sciences - PNAS (27-08-2019)“…Cells require energy for growth and maintenance and have evolved to have multiple pathways to produce energy in response to varying conditions. A basic…”
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Autotrophic yeast
Published in Nature communications (16-07-2024)“…Yeast is a widely used cell factory for the conversion of sugar into fuels, chemicals and pharmaceuticals. Establishing yeast as being autotrophic can enable…”
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Railway track geometry degradation due to differential settlement of ballast/subgrade – Numerical prediction by an iterative procedure
Published in Journal of sound and vibration (06-01-2018)“…An iterative procedure for numerical prediction of long-term degradation of railway track geometry (longitudinal level) due to accumulated differential…”
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Yeast cell factories on the horizon: Metabolic engineering in yeast gets increasingly more versatile
Published in Science (American Association for the Advancement of Science) (04-09-2015)Get full text
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Engineering yeast to produce plant-derived anti-obesity agent
Published in Nature chemistry (01-09-2023)“…Plants produce a wide range of compounds with important bioactivities. Celastrol, an anti-obesity agent found in the root of certain plants, can now be…”
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Assessing the Human Gut Microbiota in Metabolic Diseases
Published in Diabetes (New York, N.Y.) (01-10-2013)“…Recent findings have demonstrated that the gut microbiome complements our human genome with at least 100-fold more genes. In contrast to our Homo…”
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Recent trends in metabolic engineering of microbial chemical factories
Published in Current opinion in biotechnology (01-12-2019)“…[Display omitted] •Microbial cell factories can be tailored for producing certain ‘drop-in’ chemicals.•Metabolic engineering has greatly enhanced the…”
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Synthetic biology for engineering acetyl coenzyme A metabolism in yeast
Published in mBio (04-11-2014)“…The yeast Saccharomyces cerevisiae is a widely used cell factory for the production of fuels, chemicals, and pharmaceuticals. The use of this cell factory for…”
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Bioactive metabolites: The double-edged sword in your food
Published in Cell (23-11-2022)“…Food contains many different bioactive metabolites that interact with human metabolism. Many of these have health benefits, but in this issue of Cell,…”
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Genome scale metabolic modeling of cancer
Published in Metabolic engineering (01-09-2017)“…Cancer cells reprogram metabolism to support rapid proliferation and survival. Energy metabolism is particularly important for growth and genes encoding…”
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Engineering Cellular Metabolism
Published in Cell (10-03-2016)“…Metabolic engineering is the science of rewiring the metabolism of cells to enhance production of native metabolites or to endow cells with the ability to…”
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Metabolic engineering of Saccharomyces cerevisiae: a key cell factory platform for future biorefineries
Published in Cellular and molecular life sciences : CMLS (01-08-2012)“…Metabolic engineering is the enabling science of development of efficient cell factories for the production of fuels, chemicals, pharmaceuticals, and food…”
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In vitro turnover numbers do not reflect in vivo activities of yeast enzymes
Published in Proceedings of the National Academy of Sciences - PNAS (10-08-2021)“…Turnover numbers (k cat values) quantitatively represent the activity of enzymes, which are mostly measured in vitro. While a few studies have reported in vivo…”
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Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods
Published in Nucleic acids research (01-04-2013)“…Gene set analysis (GSA) is used to elucidate genome-wide data, in particular transcriptome data. A multitude of methods have been proposed for this step of the…”
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Metagenomic analysis of microbe-mediated vitamin metabolism in the human gut microbiome
Published in BMC genomics (12-03-2019)“…Human gut microbial communities have been known to produce vitamins, which are subsequently absorbed by the host in the large intestine. However, the…”
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Roux-en-Y Gastric Bypass and Vertical Banded Gastroplasty Induce Long-Term Changes on the Human Gut Microbiome Contributing to Fat Mass Regulation
Published in Cell metabolism (04-08-2015)“…Bariatric surgery is currently the most effective procedure for the treatment of obesity. Given the role of the gut microbiota in regulating host metabolism…”
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Production of natural products through metabolic engineering of Saccharomyces cerevisiae
Published in Current opinion in biotechnology (01-12-2015)“…Graphical abstract…”
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