Search Results - "Nielsen, Ida Broman"

DNA metabarcoding reveals the impact of Cu2+ on soil cercozoan diversity by Lourenço, Leah, Ellegaard Bager, Sara, Ng, Duncan Y.K., Sheikh, Sanea, Lunding Kindtler, Nikolaj, Broman Nielsen, Ida, Guldberg Frøslev, Tobias, Ekelund, Flemming

“…•First molecular study focused on heavy metal effects on Cercozoa.•Copper affected cercozoan community composition.•Increased Cu2+ concentrations correlated…”
Get full text

High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach by Mollerup, Sarah, Asplund, Maria, Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Fridholm, Helena, Hansen, Thomas Arn, Herrera, José Alejandro Romero, Barnes, Christopher James, Jensen, Randi Holm, Richter, Stine Raith, Nielsen, Ida Broman, Pietroni, Carlotta, Alquezar-Planas, David E, Rey-Iglesia, Alba, Olsen, Pernille V S, Rajpert-De Meyts, Ewa, Groth-Pedersen, Line, von Buchwald, Christian, Jensen, David H, Gniadecki, Robert, Høgdall, Estrid, Langhoff, Jill Levin, Pete, Imre, Vereczkey, Ildikó, Baranyai, Zsolt, Dybkaer, Karen, Johnsen, Hans Erik, Steiniche, Torben, Hokland, Peter, Rosenberg, Jacob, Baandrup, Ulrik, Sicheritz-Pontén, Thomas, Willerslev, Eske, Brunak, Søren, Lund, Ole, Mourier, Tobias, Vinner, Lasse, Izarzugaza, Jose M G, Nielsen, Lars Peter, Hansen, Anders Johannes

“…Abstract Background Viruses and other infectious agents cause more than 15% of human cancer cases. High-throughput sequencing-based studies of virus-cancer…”
Get full text

Metabarcoding of soil environmental DNA replicates plant community variation but not specificity by Barnes, Christopher James, Nielsen, Ida Broman, Aagaard, Anne, Ejrnæs, Rasmus, Hansen, Anders Johannes, Frøslev, Tobias Guldberg

“…While metabarcoding of plant DNA from their environment is an exciting method that can supplement inventorying of live plant species, the accuracy and…”
Get full text

Treated like dirt: Robust forensic and ecological inferences from soil eDNA after challenging sample storage by Frøslev, Tobias Guldberg, Ejrnæs, Rasmus, Hansen, Anders J., Bruun, Hans Henrik, Nielsen, Ida Broman, Ekelund, Flemming, Vestergård, Mette, Kjøller, Rasmus

“…Biodiversity of soil is routinely assessed with environmental DNA—most often by massive parallel sequencing of marker genes (eDNA metabarcoding). Soil…”
Get full text

The ancestral environment of teosinte populations shapes their root microbiome by Barnes, Christopher J, Bünner, Maria Sophie, Ramírez-Flores, M Rosario, Nielsen, Ida Broman, Ramos-Madrigal, Jazmin, Zharikova, Daria, McLaughlin, Chloee M, Gilbert, M Thomas, Sawers, Ruairidh J H

“…The composition of the root microbiome affects the host's growth, with variation in the host genome associated with microbiome variation. However, it is not…”
Get full text

Holarctic Species in the Pluteus podospileus Clade: Description of Six New Species and Reassessment of Old Names by Ševčíková, Hana, Malysheva, Ekaterina F., Antonín, Vladimír, Borovička, Jan, Dovana, Francesco, Ferisin, Giuliano, Eyssartier, Guillaume, Grootmyers, Django, Heilmann-Clausen, Jacob, Kalichman, Jacob, Kaygusuz, Oğuzhan, Lebeuf, Renée, Muñoz González, Guillermo, Minnis, Andrew M., Russell, Stephen D., Saar, Irja, Nielsen, Ida Broman, Frøslev, Tobias Guldberg, Justo, Alfredo

“…We studied the taxonomy of Pluteus podospileus and similar species using morphological and molecular (nrITS, TEF1-α) data, including a detailed study of the…”
Get full text

Seawater environmental DNA reflects seasonality of a coastal fish community by Sigsgaard, Eva Egelyng, Nielsen, Ida Broman, Carl, Henrik, Krag, Marcus Anders, Knudsen, Steen Wilhelm, Xing, Yingchun, Holm-Hansen, Tore Hejl, Møller, Peter Rask, Thomsen, Philip Francis

Get full text

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers by Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Mollerup, Sarah, Asplund, Maria, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Nielsen, Ida Broman, Alquezar-Planas, David E, Olsen, Pernille V S, Vinner, Lasse, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Sicheritz-Pontén, Thomas, Lund, Ole, Hansen, Anders Johannes, Izarzugaza, Jose M G, Brunak, Søren

“…Virus discovery from high throughput sequencing data often follows a bottom-up approach where taxonomic annotation takes place prior to association to disease…”
Get full text

The biodiversity effect of reduced tillage on soil microbiota by Frøslev, Tobias Guldberg, Nielsen, Ida Broman, Santos, Susana Silva, Barnes, Christopher James, Bruun, Hans Henrik, Ejrnæs, Rasmus

“…The conversion of natural habitats into farmland has been a leading cause of species loss worldwide. Here, we investigated to what extent less intensive soil…”
Get full text

Seawater environmental DNA reflects seasonality of a coastal fish community by Sigsgaard, Eva Egelyng, Nielsen, Ida Broman, Carl, Henrik, Krag, Marcus Anders, Knudsen, Steen Wilhelm, Xing, Yingchun, Holm-Hansen, Tore Hejl, Møller, Peter Rask, Thomsen, Philip Francis

“…Coastal marine fish populations are in decline due to overfishing, habitat destruction, climate change and invasive species. Seasonal monitoring is important…”
Get full text

DNA metabarcoding reveals the impact of Cu 2+ on soil cercozoan diversity by Lourenço, Leah, Ellegaard Bager, Sara, Ng, Duncan Y K, Sheikh, Sanea, Lunding Kindtler, Nikolaj, Broman Nielsen, Ida, Guldberg Frøslev, Tobias, Ekelund, Flemming

“…Although copper (Cu ) is a micronutrient, the metal may be toxic if present in high concentrations in soil ecosystems and subsequently affect various…”
Get full text

Holarctic Species in the IPluteus podospileus/I Clade: Description of Six New Species and Reassessment of Old Names by Ševčíková, Hana, Malysheva, Ekaterina F, Antonín, Vladimír, Borovička, Jan, Dovana, Francesco, Ferisin, Giuliano, Eyssa, Grootmyers, Django, Heilmann-Clausen, Jacob, Kalichman, Jacob, Kaygusuz, Oğuzhan, Lebeuf, Renée, Muñoz González, Guillermo, Minnis, Andrew M, Russell, Stephen D, Saar, Irja, Nielsen, Ida Broman, Frøslev, Tobias Guldberg, Justo, Alfredo

“…We studied the taxonomy of Pluteus podospileus and similar species using morphological and molecular (nrITS, TEF1-α) data, including a detailed study of the…”
Get full text