Search Results - "Nielsen, H. Bjorn"

Transcriptomes of the desiccation-tolerant resurrection plant Craterostigma plantagineum by Rodriguez, Maria C. Suarez, Edsgärd, Daniel, Hussain, Syed S, Alquezar, David, Rasmussen, Morten, Gilbert, Thomas, Nielsen, Bjørn H, Bartels, Dorothea, Mundy, John

“…Studies of the resurrection plant Craterostigma plantagineum have revealed some of the mechanisms which these desiccation-tolerant plants use to survive…”
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An online atlas of human plasma metabolite signatures of gut microbiome composition by Dekkers, Koen F., Sayols-Baixeras, Sergi, Baldanzi, Gabriel, Nowak, Christoph, Hammar, Ulf, Nguyen, Diem, Varotsis, Georgios, Brunkwall, Louise, Nielsen, Nynne, Eklund, Aron C., Bak Holm, Jacob, Nielsen, H. Bjørn, Ottosson, Filip, Lin, Yi-Ting, Ahmad, Shafqat, Lind, Lars, Sundström, Johan, Engström, Gunnar, Smith, J. Gustav, Ärnlöv, Johan, Orho-Melander, Marju, Fall, Tove

“…Human gut microbiota produce a variety of molecules, some of which enter the bloodstream and impact health. Conversely, dietary or pharmacological compounds…”
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A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults by Hansen, Lea B. S., Roager, Henrik M., Søndertoft, Nadja B., Gøbel, Rikke J., Kristensen, Mette, Vallès-Colomer, Mireia, Vieira-Silva, Sara, Ibrügger, Sabine, Lind, Mads V., Mærkedahl, Rasmus B., Bahl, Martin I., Madsen, Mia L., Havelund, Jesper, Falony, Gwen, Tetens, Inge, Nielsen, Trine, Allin, Kristine H., Frandsen, Henrik L., Hartmann, Bolette, Holst, Jens Juul, Sparholt, Morten H., Holck, Jesper, Blennow, Andreas, Moll, Janne Marie, Meyer, Anne S., Hoppe, Camilla, Poulsen, Jørgen H., Carvalho, Vera, Sagnelli, Domenico, Dalgaard, Marlene D., Christensen, Anders F., Lydolph, Magnus Christian, Ross, Alastair B., Villas-Bôas, Silas, Brix, Susanne, Sicheritz-Pontén, Thomas, Buschard, Karsten, Linneberg, Allan, Rumessen, Jüri J., Ekstrøm, Claus T., Ritz, Christian, Kristiansen, Karsten, Nielsen, H. Bjørn, Vestergaard, Henrik, Færgeman, Nils J., Raes, Jeroen, Frøkiær, Hanne, Hansen, Torben, Lauritzen, Lotte, Gupta, Ramneek, Licht, Tine Rask, Pedersen, Oluf

“…Adherence to a low-gluten diet has become increasingly common in parts of the general population. However, the effects of reducing gluten-rich food items…”
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Autoimmunity in Arabidopsis acd11 is mediated by epigenetic regulation of an immune receptor by Palma, Kristoffer, Thorgrimsen, Stephan, Malinovsky, Frederikke Gro, Fiil, Berthe Katrine, Nielsen, H Bjørn, Brodersen, Peter, Hofius, Daniel, Petersen, Morten, Mundy, John

“…Certain pathogens deliver effectors into plant cells to modify host protein targets and thereby suppress immunity. These target modifications can be detected…”
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A catalog of the mouse gut metagenome by Xiao, Liang, Feng, Qiang, Liang, Suisha, Sonne, Si Brask, Xia, Zhongkui, Qiu, Xinmin, Li, Xiaoping, Long, Hua, Zhang, Jianfeng, Zhang, Dongya, Liu, Chuan, Fang, Zhiwei, Chou, Joyce, Glanville, Jacob, Hao, Qin, Kotowska, Dorota, Colding, Camilla, Licht, Tine Rask, Wu, Donghai, Yu, Jun, Sung, Joseph Jao Yiu, Liang, Qiaoyi, Li, Junhua, Jia, Huijue, Lan, Zhou, Tremaroli, Valentina, Dworzynski, Piotr, Nielsen, H Bjørn, Bäckhed, Fredrik, Doré, Joël, Le Chatelier, Emmanuelle, Ehrlich, S Dusko, Lin, John C, Arumugam, Manimozhiyan, Wang, Jun, Madsen, Lise, Kristiansen, Karsten

“…The mouse gut microbiome is catalogued and compared to the human microbiome. We established a catalog of the mouse gut metagenome comprising ∼2.6 million…”
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A human gut microbial gene catalogue established by metagenomic sequencing by Zhu, Hongmei, Li, Shengting, Cao, Jianjun, Mende, Daniel R, Yu, Chang, Xu, Junming, Turner, Keith, Arumugam, Manimozhiyan, Nielsen, Trine, Wang, Jian, Guarner, Francisco, Bertalan, Marcelo, Sicheritz-Ponten, Thomas, Li, Shaochuan, Li, Songgang, Li, Ruiqiang, Qin, Junjie, Tap, Julien, Li, Yingrui, Pedersen, Oluf, Pons, Nicolas, Doré, Joel, Bork, Peer, Burgdorf, Kristoffer Solvsten, Renault, Pierre, Lepage, Patricia, Yamada, Takuji, Weissenbach, Jean, Xie, Yinlong, Zhou, Yan, Raes, Jeroen, Qin, Nan, Brunak, Søren, Liang, Huiqing, Levenez, Florence, Batto, Jean-Michel, Jian, Min, Li, Junhua, Parkhill, Julian, Linneberg, Allan, Nielsen, H. Bjørn, Kristiansen, Karsten, Yang, Huanming, Wang, Bo, Zheng, Huisong, Wang, Jun, Zhang, Xiuqing, Pelletier, Eric, Hansen, Torben, Le Paslier, Denis, Ehrlich, S. Dusko, Li, Dongfang, Manichanh, Chaysavanh

“…To understand the impact of gut microbes on human health and well-being it is crucial to assess their genetic potential. Here we describe the Illumina-based…”
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Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut by Roager, Henrik M., Hansen, Lea B. S., Bahl, Martin I., Frandsen, Henrik L., Carvalho, Vera, Gøbel, Rikke J., Dalgaard, Marlene D., Plichta, Damian R., Sparholt, Morten H., Vestergaard, Henrik, Hansen, Torben, Sicheritz-Pontén, Thomas, Nielsen, H. Bjørn, Pedersen, Oluf, Lauritzen, Lotte, Kristensen, Mette, Gupta, Ramneek, Licht, Tine R.

“…Little is known about how colonic transit time relates to human colonic metabolism and its importance for host health, although a firm stool consistency, a…”
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The intestinal microbiome is a co-determinant of the postprandial plasma glucose response by Søndertoft, Nadja B, Vogt, Josef K, Arumugam, Manimozhiyan, Kristensen, Mette, Gøbel, Rikke J, Fan, Yong, Lyu, Liwei, Bahl, Martin I, Eriksen, Carsten, Ängquist, Lars, Frøkiær, Hanne, Hansen, Tue H, Brix, Susanne, Nielsen, H. Bjørn, Hansen, Torben, Vestergaard, Henrik, Gupta, Ramneek, Licht, Tine R, Lauritzen, Lotte, Pedersen, Oluf

“…Elevated postprandial plasma glucose is a risk factor for development of type 2 diabetes and cardiovascular disease. We hypothesized that the inter-individual…”
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Conjugated C-6 hydroxylated bile acids in serum relate to human metabolic health and gut Clostridia species by Petersen, Anders Ø, Julienne, Hanna, Hyötyläinen, Tuulia, Sen, Partho, Fan, Yong, Pedersen, Helle Krogh, Jäntti, Sirkku, Hansen, Tue H., Nielsen, Trine, Jørgensen, Torben, Hansen, Torben, Myers, Pernille Neve, Nielsen, H. Bjørn, Ehrlich, S. Dusko, Orešič, Matej, Pedersen, Oluf

“…Knowledge about in vivo effects of human circulating C-6 hydroxylated bile acids (BAs), also called muricholic acids, is sparse. It is unsettled if the gut…”
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Gut Microbiota Perturbation in IgA Deficiency Is Influenced by IgA-Autoantibody Status by Moll, Janne Marie, Myers, Pernille Neve, Zhang, Chenchen, Eriksen, Carsten, Wolf, Johannes, Appelberg, K. Sofia, Lindberg, Greger, Bahl, Martin Iain, Zhao, Hui, Pan-Hammarström, Qiang, Cai, Kaiye, Jia, Huijue, Borte, Stephan, Nielsen, H. Bjørn, Kristiansen, Karsten, Brix, Susanne, Hammarström, Lennart

“…IgA exerts its primary function at mucosal surfaces, where it binds microbial antigens to regulate bacterial growth and epithelial attachment. One third of…”
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Streptococcus Species Abundance in the Gut Is Linked to Subclinical Coronary Atherosclerosis in 8973 Participants From the SCAPIS Cohort by Sayols-Baixeras, Sergi, Dekkers, Koen F., Baldanzi, Gabriel, Jönsson, Daniel, Hammar, Ulf, Lin, Yi-Ting, Ahmad, Shafqat, Nguyen, Diem, Varotsis, Georgios, Pita, Sara, Nielsen, Nynne, Eklund, Aron C., Holm, Jacob B., Nielsen, H. Bjørn, Ericson, Ulrika, Brunkwall, Louise, Ottosson, Filip, Larsson, Anna, Ericson, Dan, Klinge, Björn, Nilsson, Peter M., Malinovschi, Andrei, Lind, Lars, Bergström, Göran, Sundström, Johan, Ärnlöv, Johan, Engström, Gunnar, Smith, J. Gustav, Orho-Melander, Marju, Fall, Tove

“…Gut microbiota have been implicated in atherosclerotic disease, but their relation with subclinical coronary atherosclerosis is unclear. This study aimed to…”
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Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota by Forslund, Kristoffer, Hildebrand, Falk, Nielsen, Trine, Falony, Gwen, Le Chatelier, Emmanuelle, Sunagawa, Shinichi, Prifti, Edi, Vieira-Silva, Sara, Gudmundsdottir, Valborg, Krogh Pedersen, Helle, Arumugam, Manimozhiyan, Kristiansen, Karsten, Yvonne Voigt, Anita, Vestergaard, Henrik, Hercog, Rajna, Igor Costea, Paul, Roat Kultima, Jens, Li, Junhua, Jørgensen, Torben, Levenez, Florence, Dore, Joël, Bjørn Nielsen, H., Brunak, Søren, Raes, Jeroen, Hansen, Torben, Wang, Jun, Dusko Ehrlich, S., Bork, Peer, Pedersen, Oluf

“…Growing evidence from metagenome-wide association studies link multiple common disorders to microbial dysbiosis but effects of drug treatment are often not…”
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Author Correction: An online atlas of human plasma metabolite signatures of gut microbiome composition by Dekkers, Koen F., Sayols-Baixeras, Sergi, Baldanzi, Gabriel, Nowak, Christoph, Hammar, Ulf, Nguyen, Diem, Varotsis, Georgios, Brunkwall, Louise, Nielsen, Nynne, Eklund, Aron C., Bak Holm, Jacob, Nielsen, H. Bjørn, Ottosson, Filip, Lin, Yi-Ting, Ahmad, Shafqat, Lind, Lars, Sundström, Johan, Engström, Gunnar, Smith, J. Gustav, Ärnlöv, Johan, Orho-Melander, Marju, Fall, Tove

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Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora by Bay, Line K, Ulstrup, Karin E, Nielsen, H. Bjorn, Jarmer, Hanne, Goffard, Nicolas, Willis, Bette L, Miller, David J, Van Oppen, Madeleine J.H

“…We investigated variation in transcript abundance in the scleractinian coral, Acropora millepora, within and between populations characteristically exposed to…”
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Novel genes involved in pathophysiology of gonadotropin-dependent adrenal tumors in mice by Doroszko, Milena, Chrusciel, Marcin, Belling, Kirstine, Vuorenoja, Susanna, Dalgaard, Marlene, Leffers, Henrik, Nielsen, H. Bjørn, Huhtaniemi, Ilpo, Toppari, Jorma, Rahman, Nafis A.

“…Specific inbred strains and transgenic inhibin-α Simian Virus 40 T antigen (inhα/Tag) mice are genetically susceptible to gonadectomy-induced adrenocortical…”
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Lazarus1, a DUF300 protein, contributes to programmed cell death associated with Arabidopsis acd11 and the hypersensitive response by Malinovsky, Frederikke G, Brodersen, Peter, Fiil, Berthe Katrine, McKinney, Lea Vig, Thorgrimsen, Stephan, Beck, Martina, Nielsen, H Bjørn, Pietra, Stefano, Zipfel, Cyril, Robatzek, Silke, Petersen, Morten, Hofius, Daniel, Mundy, John

“…Programmed cell death (PCD) is a necessary part of the life of multi-cellular organisms. A type of plant PCD is the defensive hypersensitive response (HR)…”
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Transcriptional interactions suggest niche segregation among microorganisms in the human gut by Plichta, Damian Rafal, Juncker, Agnieszka Sierakowska, Bertalan, Marcelo, Rettedal, Elizabeth, Gautier, Laurent, Varela, Encarna, Manichanh, Chaysavanh, Fouqueray, Charlène, Levenez, Florence, Nielsen, Trine, Doré, Joël, Machado, Ana Manuel Dantas, de Evgrafov, Mari Cristina Rodriguez, Hansen, Torben, Jørgensen, Torben, Bork, Peer, Guarner, Francisco, Pedersen, Oluf, Sommer, Morten O. A., Ehrlich, S. Dusko, Sicheritz-Pontén, Thomas, Brunak, Søren, Nielsen, H. Bjørn

“…The human gastrointestinal (GI) tract is the habitat for hundreds of microbial species, of which many cannot be cultivated readily, presumably because of the…”
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Transcription analysis using high-density micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol by Mogensen, Jesper, Nielsen, H. Bjørn, Hofmann, Gerald, Nielsen, Jens

“…Here, we describe how the recently published Aspergillus nidulans genome sequence [Galagan, J.E., Calvo, S.E., Cuomo, C., Li-Jun, M., Wortman, J.R., et al.,…”
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Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes by Nielsen, H Bjørn, Almeida, Mathieu, Juncker, Agnieszka Sierakowska, Rasmussen, Simon, Li, Junhua, Sunagawa, Shinichi, Plichta, Damian R, Gautier, Laurent, Pedersen, Anders G, Le Chatelier, Emmanuelle, Pelletier, Eric, Bonde, Ida, Nielsen, Trine, Manichanh, Chaysavanh, Arumugam, Manimozhiyan, Batto, Jean-Michel, Quintanilha dos Santos, Marcelo B, Blom, Nikolaj, Borruel, Natalia, Burgdorf, Kristoffer S, Boumezbeur, Fouad, Casellas, Francesc, Doré, Joël, Dworzynski, Piotr, Guarner, Francisco, Hansen, Torben, Hildebrand, Falk, Kaas, Rolf S, Kennedy, Sean, Kristiansen, Karsten, Kultima, Jens Roat, Léonard, Pierre, Levenez, Florence, Lund, Ole, Moumen, Bouziane, Le Paslier, Denis, Pons, Nicolas, Pedersen, Oluf, Prifti, Edi, Qin, Junjie, Raes, Jeroen, Sørensen, Søren, Tap, Julien, Tims, Sebastian, Ussery, David W, Yamada, Takuji, Renault, Pierre, Sicheritz-Ponten, Thomas, Bork, Peer, Wang, Jun, Brunak, Søren, Ehrlich, S Dusko

“…Sequencing the microbial species present in complex metagenomic samples is made easier with a method that groups genes by co-abundance. Most current approaches…”
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Arabidopsis VARIEGATED 3 encodes a chloroplast-targeted, zinc-finger protein required for chloroplast and palisade cell development by Naested, Henrik, Holm, Agnethe, Jenkins, Tom, Nielsen, H Bjørn, Harris, Cassandra A, Beale, Michael H, Andersen, Mathias, Mant, Alexandra, Scheller, Henrik, Camara, Bilal, Mattsson, Ole, Mundy, John

“…The stable, recessive Arabidopsis variegated 3 (var3) mutant exhibits a variegated phenotype due to somatic areas lacking or containing developmentally…”
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