Search Results - "Navratil, Vincent"

VirHostNet 2.0: surfing on the web of virus/host molecular interactions data by Guirimand, Thibaut, Delmotte, Stéphane, Navratil, Vincent

“…VirHostNet release 2.0 (http://virhostnet.prabi.fr) is a knowledgebase dedicated to the network-based exploration of virus-host protein-protein interactions…”
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Evidence for existence of an apoptosis‐inducing BH3‐only protein, sayonara, in Drosophila by Ikegawa, Yuko, Combet, Christophe, Groussin, Mathieu, Navratil, Vincent, Safar‐Remali, Sabrina, Shiota, Takuya, Aouacheria, Abdel, Yoo, Sa Kan

“…Cells need to sense stresses to initiate the execution of the dormant cell death program. Since the discovery of the first BH3‐only protein Bad, BH3‐only…”
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Database and Bioinformatic Analysis of BCL-2 Family Proteins and BH3-Only Proteins by Aouacheria, Abdel, Navratil, Vincent, Combet, Christophe

“…BCL-2 proteins correspond to a structurally, functionally, and phylogenetically heterogeneous group of regulators that play crucial roles in the life and death…”
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Type B and type A influenza polymerases have evolved distinct binding interfaces to recruit the RNA polymerase II CTD by Krischuns, Tim, Isel, Catherine, Drncova, Petra, Lukarska, Maria, Pflug, Alexander, Paisant, Sylvain, Navratil, Vincent, Cusack, Stephen, Naffakh, Nadia

“…During annual influenza epidemics, influenza B viruses (IBVs) co-circulate with influenza A viruses (IAVs), can become predominant and cause severe morbidity…”
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In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti: An integrated next-generation sequencing approach by Faucon, Frederic, Gaude, Thierry, Dusfour, Isabelle, Navratil, Vincent, Corbel, Vincent, Juntarajumnong, Waraporn, Girod, Romain, Poupardin, Rodolphe, Boyer, Frederic, Reynaud, Stephane, David, Jean-Philippe

“…The capacity of Aedes mosquitoes to resist chemical insecticides threatens the control of major arbovirus diseases worldwide. Until alternative control tools…”
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IRGM is a common target of RNA viruses that subvert the autophagy network by Grégoire, Isabel Pombo, Richetta, Clémence, Meyniel-Schicklin, Laurène, Borel, Sophie, Pradezynski, Fabrine, Diaz, Olivier, Deloire, Alexandre, Azocar, Olga, Baguet, Joël, Le Breton, Marc, Mangeot, Philippe E, Navratil, Vincent, Joubert, Pierre-Emmanuel, Flacher, Monique, Vidalain, Pierre-Olivier, André, Patrice, Lotteau, Vincent, Biard-Piechaczyk, Martine, Rabourdin-Combe, Chantal, Faure, Mathias

“…Autophagy is a conserved degradative pathway used as a host defense mechanism against intracellular pathogens. However, several viruses can evade or subvert…”
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Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota: interactions between microorganisms in raw meat by Galia, Wessam, Leriche, Francoise, Cruveiller, Stéphane, Garnier, Cindy, Navratil, Vincent, Dubost, Audrey, Blanquet-Diot, Stéphanie, Thevenot-Sergentet, Delphine

“…Enterohemorrhagic Escherichia coli (EHEC) are zoonotic agents associated with outbreaks worldwide. Growth of EHEC strains in ground beef could be inhibited by…”
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Structure homology and interaction redundancy for discovering virus-host protein interactions by de Chassey, Benoît, Meyniel-Schicklin, Laurène, Aublin-Gex, Anne, Navratil, Vincent, Chantier, Thibaut, André, Patrice, Lotteau, Vincent

“…Virus–host interactomes are instrumental to understand global perturbations of cellular functions induced by infection and discover new therapies. The…”
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Genetic and Haplotypic Structure in 14 European and African Cattle Breeds by Gautier, Mathieu, Faraut, Thomas, Moazami-Goudarzi, Katayoun, Navratil, Vincent, Foglio, Mario, Grohs, Cecile, Boland, Anne, Garnier, Jean-Guillaume, Boichard, Didier, Lathrop, G. Mark, Gut, Ivo G, Eggen, Andre

“…To evaluate and compare the extent of LD in cattle, 1536 SNPs, mostly localized on BTA03, were detected in silico from available sequence data using two…”
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Comparison of Nucleic Acid Extraction Methods for a Viral Metagenomics Analysis of Respiratory Viruses by Sabatier, Marina, Bal, Antonin, Destras, Grégory, Regue, Hadrien, Quéromès, Grégory, Cheynet, Valérie, Lina, Bruno, Bardel, Claire, Brengel-Pesce, Karen, Navratil, Vincent, Josset, Laurence

“…Viral metagenomics next-generation sequencing (mNGS) is increasingly being used to characterize the human virome. The impact of viral nucleic extraction on…”
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Host-pathogen interactome mapping for HTLV-1 and -2 retroviruses by Simonis, Nicolas, Rual, Jean-François, Lemmens, Irma, Boxus, Mathieu, Hirozane-Kishikawa, Tomoko, Gatot, Jean-Stéphane, Dricot, Amélie, Hao, Tong, Vertommen, Didier, Legros, Sébastien, Daakour, Sarah, Klitgord, Niels, Martin, Maud, Willaert, Jean-François, Dequiedt, Franck, Navratil, Vincent, Cusick, Michael E, Burny, Arsène, Van Lint, Carine, Hill, David E, Tavernier, Jan, Kettmann, Richard, Vidal, Marc, Twizere, Jean-Claude

“…Human T-cell leukemia virus type 1 (HTLV-1) and type 2 both target T lymphocytes, yet induce radically different phenotypic outcomes. HTLV-1 is a causative…”
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Two-Dimensional Statistical Recoupling for the Identification of Perturbed Metabolic Networks from NMR Spectroscopy by Blaise, Benjamin J, Navratil, Vincent, Domange, Céline, Shintu, Laetitia, Dumas, Marc-Emmanuel, Elena-Herrmann, Bénédicte, Emsley, Lyndon, Toulhoat, Pierre

“…The development of Statistical Total Correlation Spectroscopy (STOCSY), a representation of the autocorrelation matrix of a spectral data set as a 2D…”
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Homology-Dependent Methylation in Primate Repetitive DNA by Meunier, Julien, Khelifi, Adel, Navratil, Vincent, Duret, Laurent, Lipman, David J.

“…In mammals, several studies have suggested that levels of methylation are higher in repetitive DNA than in nonrepetitive DNA, possibly reflecting a genome-wide…”
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In silico whole-genome screening for cancer-related single-nucleotide polymorphisms located in human mRNA untranslated regions by Aouacheria, Abdel, Navratil, Vincent, López-Pérez, Ricardo, Gutiérrez, Norma C, Churkin, Alexander, Barash, Danny, Mouchiroud, Dominique, Gautier, Christian

“…A promising application of the huge amounts of genetic data currently available lies in developing a better understanding of complex diseases, such as cancer…”
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Bioinformatic screening of human ESTs for differentially expressed genes in normal and tumor tissues by Aouacheria, Abdel, Navratil, Vincent, Barthelaix, Audrey, Mouchiroud, Dominique, Gautier, Christian

“…Owing to the explosion of information generated by human genomics, analysis of publicly available databases can help identify potential candidate genes…”
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pISTil: a pipeline for yeast two-hybrid Interaction Sequence Tags identification and analysis by Pellet, Johann, Meyniel, Laurène, Vidalain, Pierre-Olivier, de Chassey, Benoît, Tafforeau, Lionel, Lotteau, Vincent, Rabourdin-Combe, Chantal, Navratil, Vincent

“…High-throughput screening of protein-protein interactions opens new systems biology perspectives for the comprehensive understanding of cell physiology in…”
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Advances in Analyzing Virus-Induced Alterations of Host Cell Splicing by Ashraf, Usama, Benoit-Pilven, Clara, Lacroix, Vincent, Navratil, Vincent, Naffakh, Nadia

“…Alteration of host cell splicing is a common feature of many viral infections which is underappreciated because of the complexity and technical difficulty of…”
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Identifying genomic changes associated with insecticide resistance in the dengue mosquito Aedes aegypti by deep targeted sequencing by Faucon, Frederic, Dusfour, Isabelle, Gaude, Thierry, Navratil, Vincent, Boyer, Frederic, Chandre, Fabrice, Sirisopa, Patcharawan, Thanispong, Kanutcharee, Juntarajumnong, Waraporn, Poupardin, Rodolphe, Chareonviriyaphap, Theeraphap, Girod, Romain, Corbel, Vincent, Reynaud, Stephane, David, Jean-Philippe

“…The capacity of mosquitoes to resist insecticides threatens the control of diseases such as dengue and malaria. Until alternative control tools are…”
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Sample size calculation in metabolic phenotyping studies by Billoir, Elise, Navratil, Vincent, Blaise, Benjamin J

“…The number of samples needed to identify significant effects is a key question in biomedical studies, with consequences on experimental designs, costs and…”
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Correction: Type B and type A influenza polymerases have evolved distinct binding interfaces to recruit the RNA polymerase II CTD by Krischuns, Tim, Isel, Catherine, Drncova, Petra, Lukarska, Maria, Pflug, Alexander, Paisant, Sylvain, Navratil, Vincent, Cusack, Stephen, Naffakh, Nadia

“…[This corrects the article DOI: 10.1371/journal.ppat.1010328.]…”
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