Search Results - "Naumoff, D. G."

Hierarchical classification of glycoside hydrolases by Naumoff, D. G.

“…This review deals with structural and functional features of glycoside hydrolases, a widespread group of enzymes present in almost all living organisms. Their…”
Get full text

Glycoside Hydrolases of the Obligate Methanotroph Methyloferula stellata: An Unusual Evolutionary Strategy Not Involving Distant Lateral Transfers by Naumoff, D. G., Dedysh, S. N.

“…— The genome of the obligately methanotrophic bacterium Methyloferula stellata AR4 encodes thirty glycoside hydrolases. The closest homologues for most of…”
Get full text

Comparative Genomics of Carbohydrate Utilization in Bacteria of the Family Sphaerochaetaceae: Evolutionary Origin of the Genes Encoding Galacturonidase and Unsaturated Rhamnogalacturonyl Hydrolase by Troshina, O. Yu, Naumoff, D. G., Rechkina, V. I., Shcherbakova, V. A.

“…A comparative analysis of carbohydrate degradation proteins encoded in the currently available genomic sequences of bacteria of the family Sphaerochaetaceae ,…”
Get full text

GH10 family of glycoside hydrolases: Structure and evolutionary connections by Naumoff, D. G.

“…Evolutionary connections were analyzed for endo-β-xylanases, which possess the GH10 family catalytic domains. A homology search yielded thrice as many proteins…”
Get full text

Phylogenetic Analysis of alpha -Galactosidases of the GH27 Family by Naumoff, D G

“…Amino acid sequence analysis of alpha -galactosidases and other proteins of glycoside hydrolase family 27 (GH27) allowed isolation of three major subfamilies,…”
Get full text

Chitinases Encoded in the Genomes of Acidobacteria: Origin and Evolution by Naumoff, D. G., Dedysh, S. N.

“…Acidobacteria are one of the widespread and numerically abundant groups of prokaryotes in soils and peatlands. The functional potential of these microorganisms…”
Get full text

Genetic Determinants of Xylan Utilization in Humisphaera borealis M1803T, a Planctomycete of the Class Phycisphaerae by Naumoff, D. G., Kulichevskaya, I. S., Dedysh, S. N.

“…— Planctomycetes of the class Phycisphaerae are aerobic and anaerobic heterotrophic bacteria that colonize a wide range of marine and terrestrial habitats…”
Get full text

Bacteria from Poorly Studied Phyla as a Potential Source of New Enzymes: β-Galactosidases from Planctomycetes and Verrucomicrobia by Naumoff, D. G., Dedysh, S. N.

“…— Here, we present a phylogenetic analysis of a large group of the nearest homologues of a β-galactosidase, recently cloned from a soil metagenome and…”
Get full text

Paludisphaera mucosa sp. nov., a Novel Planctomycete of the Family Isosphaeraceae from a Boreal Fen by Ivanova, A. A., Naumoff, D. G., Kulichevskaya, I. S., Meshcheriakova, A. A., Dedysh, S. N.

“…— Planctomycetes are common inhabitants of northern wetland ecosystems. In this study, a new planctomycete of the genus Paludisphaera , strain Pla2 T , was…”
Get full text

Detection of Chitinolytic Capabilities in the Freshwater Planctomycete Planctomicrobium piriforme by Kulichevskaya, I. S., Naumoff, D. G., Ivanova, A. A., Rakitin, A. L., Dedysh, S. N.

“…Members of the phylum Planctomycetes colonize a wide range of aquatic and terrestrial habitats, but their functional role in the environment remains poorly…”
Get full text

Furanosidase superfamily: Search of homologues by Naumoff, D. G.

“…The furanosidase superfamily contains the GH32, GH43, GH62, GH68, GH117, DUF377 (GH130), and DUF1861 families of glycoside hydrolases and their homologues…”
Get full text

GHL1-GHL15: New families of the hypothetical glycoside hydrolases by Naumoff, D. G.

“…The domains of 15 recently discovered families of the hypothetical glycoside hydrolases GHL1-GHL15 were used for iterative screening of the protein database…”
Get full text

Phylogenetic Analysis of  -Galactosidases of the GH27 Family by Naumoff, D G

“…Amino acid sequence analysis of α-galactosidases and other proteins of glycoside hydrolase family 27 (GH27) allowed isolation of three major subfamilies,…”
Get full text

Phylogeny of β-xylanases from Planctomycetes by Naumoff, D. G., Ivanova, A. A., Dedysh, S. N.

“…Here, we present the results of a computational analysis of a group of hypothetical GH10 endo-β-xylanases from the Planctomycetes, a bacterial phylum with…”
Get full text

Structure and evolution of the mammalian maltase-glucoamylase and sucrase-isomaltase genes by Naumoff, D G

“…Maltase-glucoamylase and sucrase-isomaltase are two glycosydases responsible for starch digestion in human. Their evolutionary history was studied by comparing…”
Get full text

PSI protein classifier: A new program automating PSI-BLAST search results by Naumoff, D. G., Carreras, M.

“…A new program, PSI Protein Classifier, generalizing the results of both successive and independent iterations of the PSI-BLAST program was developed. The…”
Get full text

Discovery of a novel family of α-glucosidase IMA genes in yeast Saccharomyces cerevisiae by Naumoff, D. G., Naumov, G. I.

Get full text

Furanosidase superfamily: Search of homologues by Naumoff, D. G.

Get full text

β-Fructosidase superfamily: Homology with some α-L-arabinases and β-D-xylosidases by Naumoff, Daniil G.

“…Comparison of the amino acid sequences of four families of glycosyl hydrolases reveals that they are homologous and have several common conserved regions. Two…”
Get full text

Molecular Structure of the Lactobacillus plantarum Sucrose Utilization Locus: Comparison with Pediococcus pentosaceus by Naumoff, D G, Livshits, V A

“…Structure of the sucrose utilization locus in a Lactobacillus plantarum type strain was studied using PCR and Southern hybridization. Restriction map analysis…”
Get full text