Search Results - "Narayan P Adhikari"

Investigating molecular interactions between Kaiso and nuclear co-repressor using molecular simulations by Thapa, Bidhya, Adhikari, Narayan P.

“…Zinc finger (ZF) protein Kaiso mediates the transcription repression by binding with methylated DNA through ZF domains and recruiting the nuclear receptor…”
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Transport properties of aqueous solution of γ-aminobutyric acid by Khanal, Shyam P., Koirala, Rajendra P., Mishra, Esha, Adhikari, Narayan P.

“…Transportation of amino acids throughout the body is an essential mechanism to support life processes. Transportation phenomena such as diffusion, viscosity,…”
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Transport properties of zwitterion glycine, diglycine, and triglycine in water by Khanal, Shyam P., Kandel, Yadav Prasad, Adhikari, Narayan P.

“…Diffusion, transport of mass in response to concentration and thermal energy gradient, is an important transport property, vital in material science and life…”
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A 5′-Flanking C/G Pair at the Core Region Enhances the Recognition and Binding of Kaiso to Methylated DNA by Thapa, Bidhya, Adhikari, Narayan P., Tiwari, Purushottam B., Chapagain, Prem P.

“…Methyl CpG binding proteins (MBPs) are transcription factors that recognize the methylated CpG sites in DNA and mediate the DNA methylation signal into various…”
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Phase separation in mixtures of flexible and semiflexible polymers by Adhikari, Narayan P, Straube, Ekkehard

“…Using off-lattice Monte Carlo simulations, the critical value of the Flory–Huggins parameter, χ , for flexible–semiflexible (isotropic–isotropic) polymer…”
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Structural insights into the repair mechanism of AGT for methyl-induced DNA damage by Koirala, Rajendra P, Pokhrel, Rudramani, Baral, Prabin, Tiwari, Purushottam B, Chapagain, Prem P, Adhikari, Narayan P

“…Methylation induced DNA base-pairing damage is one of the major causes of cancer. O -alkylguanine-DNA alkyltransferase (AGT) is considered a demethylation…”
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Thermal properties of normal and sickled hemoglobin protein by Powrel, Jhulan, Adhikari, Narayan P

“…Thermodynamic properties of sickled and normal hemoglobin protein are considered within the framework of classical molecular dynamics. Here we have studied the…”
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Binding of SARS-CoV-2/SARS-CoV spike protein with human ACE2 receptor by Koirala, Rajendra P, Thapa, Bidhya, Khanal, Shyam P, Powrel, Jhulan, Adhikari, Rajendra P, Adhikari, Narayan P

“…SARS-CoV-2 virus is the serious health concern throughout the world. A comprehensive investigation of binding of SARS-CoV-2 active site with host receptor…”
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Multiscale modeling of the surfactant mediated synthesis and supramolecular assembly of cobalt nanodots by ADHIKARI, Narayan P, XIHONG PENG, ALIZADEH, Azar, GANTI, Surya, NAYAK, Saroj K, KUMAR, Sanat K

“…Multiscale simulations are used to bridge the surfactant templated assembly of individual approximately 1-10 nm cobalt dots, to their ordering into…”
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Temperature dependence of diffusion coefficient of carbon monoxide in water: A molecular dynamics study by Poudyal, Ishwor, Adhikari, Narayan P.

“…In the present work, molecular dynamics simulations of a mixture of carbon monoxide (CO) gas in SPC/E water (H2O) with CO as a solute and water as a solvent…”
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First-principles study of pressure dependence superconductivity in technetium and tantalum by Shah, Amit K., Khatiwada, Ramila, Adhikari, Narayan P., Adhikari, Rajendra P.

“…The variation of superconducting transition temperature (Tc) under pressure are studied by means of first-principles calculations of the electron-phonon…”
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Thermal properties of normal and sickled hemoglobin protein by Jhulan Powrel, Narayan P Adhikari

“…Thermodynamic properties of sickled and normal hemoglobin protein are considered within the framework of classical molecular dynamics. Here we have studied the…”
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Interfacial Properties of Asymmetric Polymer Mixtures by Adhikari, Narayan P., Straube, Ekkehard

“…Using a Monte‐Carlo simulation of a continuous space Rod Bead Model the interface properties of systems of flexible polymer chains with different sizes of…”
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Molecular dynamics study of diffusion of heavy water in normal water at different temperatures by Dahal, Uday, Adhikari, Narayan P.

“…In the present work we study the diffusion of heavy water in the ordinary water and their mutual diffusion coefficient. Molecular dynamics studies of a binary…”
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Interfacial Tension and Width of an Asymmetric Polymer Mixture by Adhikari, Narayan P.

“…We have used continuous space rod‐bead model and an off‐lattice Monte Carlo technique to investigate interfacial properties between two incompatible polymers…”
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First-principles DFT study for the structural stability of Hydrogen passivated graphene (H-graphene) and atomic adsorption of oxygen on H-graphene with different schemes by Karki, Deepak B, Adhikari, Narayan P

“…First-principles DFT levels of calculations have been carried out in order to study the structural stability and electronic properties of hydrogen passivated…”
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