Search Results - "Nanda, Sumit"

Online conversion of reconstructed neural morphologies into standardized SWC format by Mehta, Ketan, Ljungquist, Bengt, Ogden, James, Nanda, Sumit, Ascoli, Ruben G., Ng, Lydia, Ascoli, Giorgio A.

“…Digital reconstructions provide an accurate and reliable way to store, share, model, quantify, and analyze neural morphology. Continuous advances in cellular…”
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Local Microtubule and F-Actin Distributions Fully Constrain the Spatial Geometry of Drosophila Sensory Dendritic Arbors by Nanda, Sumit, Bhattacharjee, Shatabdi, Cox, Daniel N, Ascoli, Giorgio A

“…Dendritic morphology underlies the source and processing of neuronal signal inputs. Morphology can be broadly described by two types of geometric…”
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An open repository for single-cell reconstructions of the brain forest by Akram, Masood A., Nanda, Sumit, Maraver, Patricia, Armañanzas, Rubén, Ascoli, Giorgio A.

“…NeuroMorpho.Org was launched in 2006 to provide unhindered access to any and all digital tracings of neuronal morphology that researchers were willing to share…”
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The Zinc-BED Transcription Factor Bedwarfed Promotes Proportional Dendritic Growth and Branching through Transcriptional and Translational Regulation in Drosophila by Bhattacharjee, Shatabdi, Iyer, Eswar Prasad R, Iyer, Srividya Chandramouli, Nanda, Sumit, Rubaharan, Myurajan, Ascoli, Giorgio A, Cox, Daniel N

“…Dendrites are the primary points of sensory or synaptic input to a neuron and play an essential role in synaptic integration and neural function. Despite the…”
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PP2A phosphatase regulates cell-type specific cytoskeletal organization to drive dendrite diversity by Bhattacharjee, Shatabdi, Lottes, Erin N, Nanda, Sumit, Golshir, Andre, Patel, Atit A, Ascoli, Giorgio A, Cox, Daniel N

“…Uncovering molecular mechanisms regulating dendritic diversification is essential to understanding the formation and modulation of functional neural circuitry…”
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Distinct Relations of Microtubules and Actin Filaments with Dendritic Architecture by Nanda, Sumit, Bhattacharjee, Shatabdi, Cox, Daniel N., Ascoli, Giorgio A.

“…Microtubules (MTs) and F-actin (F-act) have long been recognized as key regulators of dendritic morphology. Nevertheless, precisely ascertaining their distinct…”
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An imaging analysis protocol to trace, quantify, and model multi-signal neuron morphology by Nanda, Sumit, Bhattacharjee, Shatabdi, Cox, Daniel N., Ascoli, Giorgio A.

“…We describe how to reconstruct and quantify multi-signal neuronal morphology, using the dendritic distributions of microtubules and F-actin in sensory neurons…”
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Design and implementation of multi-signal and time-varying neural reconstructions by Nanda, Sumit, Chen, Hanbo, Das, Ravi, Bhattacharjee, Shatabdi, Cuntz, Hermann, Torben-Nielsen, Benjamin, Peng, Hanchuan, Cox, Daniel N., De Schutter, Erik, Ascoli, Giorgio A.

“…Several efficient procedures exist to digitally trace neuronal structure from light microscopy, and mature community resources have emerged to store, share,…”
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Local Microtubule and F-Actin Distributions Fully Constrain the Spatial Geometry of IDrosophila/I Sensory Dendritic Arbors by Nanda, Sumit, Bhattacharjee, Shatabdi, Cox, Daniel N, Ascoli, Giorgio A

“…Dendritic morphology underlies the source and processing of neuronal signal inputs. Morphology can be broadly described by two types of geometric…”
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Win–win data sharing in neuroscience by Ascoli, Giorgio A, Maraver, Patricia, Nanda, Sumit, Polavaram, Sridevi, Armañanzas, Rubén

“…In this Commentary, Ascoli et al . discuss recipes for setting up public data sharing initiatives based on their experiences with NeuroMorpho.Org. Most…”
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The Zinc-BED Transcription Factor Bedwarfed Promotes Proportional Dendritic Growth and Branching through Transcriptional and Translational Regulation in IDrosophila/I by Bhattacharjee, Shatabdi, Iyer, Eswar Prasad R, Iyer, Srividya Chandramouli, Nanda, Sumit, Rubaharan, Myurajan, Ascoli, Giorgio A, Cox, Daniel N

“…Dendrites are the primary points of sensory or synaptic input to a neuron and play an essential role in synaptic integration and neural function. Despite the…”
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Morphological determinants of dendritic arborization neurons in Drosophila larva by Nanda, Sumit, Das, Ravi, Bhattacharjee, Shatabdi, Cox, Daniel N., Ascoli, Giorgio A.

“…Pairing in vivo imaging and computational modeling of dendritic arborization (da) neurons from the fruit fly larva provides a unique window into neuronal…”
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BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets by Manubens-Gil, Linus, Zhou, Zhi, Chen, Hanbo, Ramanathan, Arvind, Liu, Xiaoxiao, Liu, Yufeng, Bria, Alessandro, Gillette, Todd, Ruan, Zongcai, Yang, Jian, Radojević, Miroslav, Zhao, Ting, Cheng, Li, Qu, Lei, Liu, Siqi, Bouchard, Kristofer E., Gu, Lin, Cai, Weidong, Ji, Shuiwang, Roysam, Badrinath, Wang, Ching-Wei, Yu, Hongchuan, Sironi, Amos, Iascone, Daniel Maxim, Zhou, Jie, Bas, Erhan, Conde-Sousa, Eduardo, Aguiar, Paulo, Li, Xiang, Li, Yujie, Nanda, Sumit, Wang, Yuan, Muresan, Leila, Fua, Pascal, Ye, Bing, He, Hai-yan, Staiger, Jochen F., Peter, Manuel, Cox, Daniel N., Simonneau, Michel, Oberlaender, Marcel, Jefferis, Gregory, Ito, Kei, Gonzalez-Bellido, Paloma, Kim, Jinhyun, Rubel, Edwin, Cline, Hollis T., Zeng, Hongkui, Nern, Aljoscha, Chiang, Ann-Shyn, Yao, Jianhua, Roskams, Jane, Livesey, Rick, Stevens, Janine, Liu, Tianming, Dang, Chinh, Guo, Yike, Zhong, Ning, Tourassi, Georgia, Hill, Sean, Hawrylycz, Michael, Koch, Christof, Meijering, Erik, Ascoli, Giorgio A., Peng, Hanchuan

“…BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a…”
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Formin 3 directs dendritic architecture via microtubule regulation and is required for somatosensory nociceptive behavior by Das, Ravi, Bhattacharjee, Shatabdi, Letcher, Jamin M, Harris, Jenna M, Nanda, Sumit, Foldi, Istvan, Lottes, Erin N, Bobo, Hansley M, Grantier, Benjamin D, Mihály, József, Ascoli, Giorgio A, Cox, Daniel N

“…Dendrite shape impacts functional connectivity and is mediated by organization and dynamics of cytoskeletal fibers. Identifying the molecular factors that…”
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Description and Simulation of Neurostructural Plasticity: Role of Cytoskeletal Molecules by Nanda, Sumit

“…Neuronal morphology underlies network connectivity and signal computation in the brain, thus profoundly influencing nervous system function. Diverse neural…”
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Dendritic Cytoskeletal Architecture Is Modulated by Combinatorial Transcriptional Regulation in Drosophila melanogaster by Das, Ravi, Bhattacharjee, Shatabdi, Patel, Atit A, Harris, Jenna M, Bhattacharya, Surajit, Letcher, Jamin M, Clark, Sarah G, Nanda, Sumit, Iyer, Eswar Prasad R, Ascoli, Giorgio A, Cox, Daniel N

“…Transcription factors (TFs) have emerged as essential cell autonomous mediators of subtype specific dendritogenesis; however, the downstream effectors of these…”
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Author Correction: BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets by Manubens-Gil, Linus, Zhou, Zhi, Chen, Hanbo, Ramanathan, Arvind, Liu, Xiaoxiao, Liu, Yufeng, Bria, Alessandro, Gillette, Todd, Ruan, Zongcai, Yang, Jian, Radojević, Miroslav, Zhao, Ting, Cheng, Li, Qu, Lei, Liu, Siqi, Bouchard, Kristofer E., Gu, Lin, Cai, Weidong, Ji, Shuiwang, Roysam, Badrinath, Wang, Ching-Wei, Yu, Hongchuan, Sironi, Amos, Iascone, Daniel Maxim, Zhou, Jie, Bas, Erhan, Conde-Sousa, Eduardo, Aguiar, Paulo, Li, Xiang, Li, Yujie, Nanda, Sumit, Wang, Yuan, Muresan, Leila, Fua, Pascal, Ye, Bing, He, Hai-yan, Staiger, Jochen F., Peter, Manuel, Cox, Daniel N., Simonneau, Michel, Oberlaender, Marcel, Jefferis, Gregory, Ito, Kei, Gonzalez-Bellido, Paloma, Kim, Jinhyun, Rubel, Edwin, Cline, Hollis T., Zeng, Hongkui, Nern, Aljoscha, Chiang, Ann-Shyn, Yao, Jianhua, Roskams, Jane, Livesey, Rick, Stevens, Janine, Liu, Tianming, Dang, Chinh, Guo, Yike, Zhong, Ning, Tourassi, Georgia, Hill, Sean, Hawrylycz, Michael, Koch, Christof, Meijering, Erik, Ascoli, Giorgio A., Peng, Hanchuan

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Doubling up on the Fly: NeuroMorpho.Org Meets Big Data by Nanda, Sumit, Allaham, M. Mowafak, Bergamino, Maurizio, Polavaram, Sridevi, Armañanzas, Rubén, Ascoli, Giorgio A., Parekh, Ruchi

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Intravitreal removal of large, fibrotic choroidal neovascular membrane complexes in submacular surgery by Haivala, Darin R, Nanda, Sumit K

“…Submacular surgery is a current alternative technique for the treatment of subfoveal choroidal neovascular membranes (CNVM). One of the difficulties often…”
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Clinicopathologic correlation of recurrent epiretinal membranes after previous surgical removal by Maguire, A M, Smiddy, W E, Nanda, S K, Michels, R G, de la Cruz, Z, Green, W R

“…Recurrent epiretinal membranes (ERMs) causing macular pucker developed after surgical removal in seven eyes and were subsequently removed. A specimen was…”
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