Search Results - "Nalbantoglu, Ufuk"

Information Theoretic Metagenome Assembly Allows the Discovery of Disease Biomarkers in Human Microbiome by Nalbantoglu, O Ufuk

“…Quantitative metagenomics is an important field that has delivered successful microbiome biomarkers associated with host phenotypes. The current convention…”
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Arthroscopic suture-tape internal bracing is safe as arthroscopic modified Broström repair in the treatment of chronic ankle instability by Ulku, Tekin Kerem, Kocaoglu, Baris, Tok, Okan, Irgit, Kaan, Nalbantoglu, Ufuk

“…Purpose The aim of the study was to compare the intermediate-term clinical outcomes between lateral ligaments augmentation using suture-tape and modified…”
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Discovering Potential Taxonomic Biomarkers of Type 2 Diabetes From Human Gut Microbiota via Different Feature Selection Methods by Bakir-Gungor, Burcu, Bulut, Osman, Jabeer, Amhar, Nalbantoglu, O Ufuk, Yousef, Malik

“…Human gut microbiota is a complex community of organisms including trillions of bacteria. While these microorganisms are considered as essential regulators of…”
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The role of the Mediterranean diet in modulating the gut microbiome: A review of current evidence by Gundogdu, Aycan, Nalbantoglu, Ozkan Ufuk

“…•A significant part of the health benefits provided by the Mediterranean diet (MedDiet) can be attributed to its microbiome mediation.•Gut microbiota assembly…”
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Group testing performance evaluation for SARS-CoV-2 massive scale screening and testing by Nalbantoglu, Ozkan Ufuk

“…The capacity of the current molecular testing convention does not allow high-throughput and community level scans of COVID-19 infections. The diameter in the…”
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Artificial intelligence-based personalized diet: A pilot clinical study for irritable bowel syndrome by Karakan, Tarkan, Gundogdu, Aycan, Alagözlü, Hakan, Ekmen, Nergiz, Ozgul, Seckin, Tunali, Varol, Hora, Mehmet, Beyazgul, Damla, Nalbantoglu, O. Ufuk

“…We enrolled consecutive IBS-M patients (n = 25) according to Rome IV criteria. Fecal samples were obtained from all patients twice (pre-and post-intervention)…”
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Gut microbiota in patients with newly diagnosed acromegaly: a pilot cross-sectional study by Hacioglu, Aysa, Gundogdu, Aycan, Nalbantoglu, Ufuk, Karaca, Zuleyha, Urhan, Muhammed Emre, Sahin, Serdar, Dokmetas, Hatice Sebile, Kadioglu, Pinar, Kelestimur, Fahrettin

“…Purpose Microbiota has crucial biological importance for human well-being. Bidirectional interaction exists between microbiota and the host, and there have…”
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Temporal overexpression of IL‐22 and Reg3γ differentially impacts the severity of experimental autoimmune encephalomyelitis by Eken, Ahmet, Erdem, Serife, Haliloglu, Yesim, Zehra Okus, Fatma, Cakir, Mustafa, Fatih Yetkin, Mehmet, Akcakoyunlu, Merve, Karayigit, Mehmet Onder, Azizoglu, Zehra Busra, Bicer, Ayten, Gur, Tugba Nur, Aslan, Kubra, Hora, Mehmet, Oukka, Mohamed, Altuntas, Hamiyet Donmez, Ufuk Nalbantoglu, Ozkan, Gundogdu, Aycan, Mirza, Meral, Canatan, Halit

“…IL‐22 is an alpha‐helical cytokine which belongs to the IL‐10 family of cytokines. IL‐22 is produced by RORγt+ innate and adaptive lymphocytes, including ILC3,…”
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Potential associations between alterations in gut microbiome and obesity‐related traits after the bariatric surgery by Özdemir, Aslıhan, Yozgat, Ahmet, Işgın‐Atıcı, Kübra, Avcı, Enver, Yıldız, Barış D., Gündoğdu, Aycan, Nalbantoğlu, Ufuk, Turhan, Turan, Doğruman‐Al, Funda, Büyüktuncer, Zehra

“…Background This study aimed to examine the effects of both obesity and bariatric surgery on gut microbiome, dietary intake, as well as metabolic and…”
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Stratification of the Gut Microbiota Composition Landscape across the Alzheimer's Disease Continuum in a Turkish Cohort by Yıldırım, Süleyman, Nalbantoğlu, Özkan Ufuk, Bayraktar, Abdulahad, Ercan, Fatma Betül, Gündoğdu, Aycan, Velioğlu, Halil Aziz, Göl, Mehmet Fatih, Soylu, Ayten Ekinci, Koç, Fatma, Gülpınar, Ezgi Aslan, Kadak, Kübra Sogukkanlı, Arıkan, Muzaffer, Mardinoğlu, Adil, Koçak, Mehmet, Köseoğlu, Emel, Hanoğlu, Lütfü

“…Alzheimer's disease (AD) is a heterogeneous disorder that spans a continuum with multiple phases, including preclinical, mild cognitive impairment, and…”
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A Shotgun Metagenomics Investigation into Labeling Inaccuracies in Widely Sold Probiotic Supplements in the USA by Gundogdu, Aycan, Karis, Gizem, Killpartrick, Adam, Ulu‐Kilic, Aysegul, Nalbantoglu, Ozkan Ufuk

“…While probiotics are generally considered safe, concerns persist regarding the accuracy of labels on these supplements and their potential contribution to the…”
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Comparative study of the closed reduction percutaneous cannulated screw fixation and open reduction palmar locking plate fixation in the treatment of AO type A2 distal radius fractures by Gereli, Arel, Nalbantoglu, Ufuk, Kocaoglu, Baris, Turkmen, Metin

“…Introduction The present study was designed to demonstrate the efficacy of standard 4.0 mm cannulated screw fixation by comparing it with palmar locking plate…”
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Inflammatory bowel disease biomarkers of human gut microbiota selected via different feature selection methods by Bakir-Gungor, Burcu, Hacılar, Hilal, Jabeer, Amhar, Nalbantoglu, Ozkan Ufuk, Aran, Oya, Yousef, Malik

“…The tremendous boost in next generation sequencing and in the "omics" technologies makes it possible to characterize the human gut microbiome-the collective…”
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COVID-19 Pandemic: Group Testing by Nalbantoglu, Ozkan Ufuk, Gundogdu, Aycan

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Francisella tularensis Subtype A.II Genomic Plasticity in Comparison with Subtype A.I by Larson, Marilynn A, Nalbantoglu, Ufuk, Sayood, Khalid, Zentz, Emily B, Bartling, Amanda M, Francesconi, Stephen C, Fey, Paul D, Dempsey, Michael P, Hinrichs, Steven H

“…Although Francisella tularensis is considered a monomorphic intracellular pathogen, molecular genotyping and virulence studies have demonstrated important…”
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Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and Schu S4 by Nalbantoglu, Ufuk, Sayood, Khalid, Dempsey, Michael P, Iwen, Peter C, Francesconi, Stephen C, Barabote, Ravi D, Xie, Gary, Brettin, Thomas S, Hinrichs, Steven H, Fey, Paul D

“…Francisella tularensis subspecies tularensis consists of two separate populations A1 and A2. This report describes the complete genome sequence of NE061598, an…”
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Capitellar Cartilage Injuries Concomitant With Radial Head Fractures by Nalbantoglu, Ufuk, MD, Gereli, Arel, MD, Kocaoglu, Baris, MD, Aktas, Seref, MD, Turkmen, Metin, MD

“…Purpose To evaluate the incidence and types of capitellar cartilage injuries associated with higher-grade radial head fractures. Methods Fifty-one consecutive…”
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Open Reduction and Internal Fixation of Mason Type III Radial Head Fractures With and Without an Associated Elbow Dislocation by Nalbantoglu, Ufuk, MD, Kocaoglu, Baris, MD, Gereli, Arel, MD, Aktas, Seref, MD, Guven, Osman, MD

“…Purpose The purpose of this study was to evaluate the treatment of patients with Mason type III radial head fracture with and without elbow dislocation by open…”
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A comprehensive review of deep learning in colon cancer by Pacal, Ishak, Karaboga, Dervis, Basturk, Alper, Akay, Bahriye, Nalbantoglu, Ufuk

“…Deep learning has emerged as a leading machine learning tool in object detection and has attracted attention with its achievements in progressing medical image…”
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MIMOSA: Algorithms for Microbial Profiling by Nalbantoglu, O. Ufuk, Sayood, Khalid

“…A significant goal of the study of metagenomes obtained from an environment is to find the microbial diversity and the abundance of each organism in the…”
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