Search Results - "Nakamoto, Jose A."

A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis by Takada, Hiraku, Paternoga, Helge, Fujiwara, Keigo, Nakamoto, Jose A, Park, Esther N, Dimitrova-Paternoga, Lyudmila, Beckert, Bertrand, Saarma, Merilin, Tenson, Tanel, Buskirk, Allen R, Atkinson, Gemma C, Chiba, Shinobu, Wilson, Daniel N, Hauryliuk, Vasili

“…Abstract Ribosomes trapped on mRNAs during protein synthesis need to be rescued for the cell to survive. The most ubiquitous bacterial ribosome rescue pathway…”
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Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes by Koller, Timm O, Turnbull, Kathryn J, Vaitkevicius, Karolis, Crowe-McAuliffe, Caillan, Roghanian, Mohammad, Bulvas, Ondřej, Nakamoto, Jose A, Kurata, Tatsuaki, Julius, Christina, Atkinson, Gemma C, Johansson, Jörgen, Hauryliuk, Vasili, Wilson, Daniel N

“…Abstract HflX is a ubiquitous bacterial GTPase that splits and recycles stressed ribosomes. In addition to HflX, Listeria monocytogenes contains a second HflX…”
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Novel CRISPR-based detection of Leishmania species by Dueñas, Eva, Nakamoto, Jose A, Cabrera-Sosa, Luis, Huaihua, Percy, Cruz, María, Arévalo, Jorge, Milón, Pohl, Adaui, Vanessa

“…Tegumentary leishmaniasis, a disease caused by protozoan parasites of the genus , is a major public health problem in many regions of Latin America. Its…”
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DNA aptamers for the recognition of HMGB1 from Plasmodium falciparum by Joseph, Diego F, Nakamoto, Jose A, Garcia Ruiz, Oscar Andree, Peñaranda, Katherin, Sanchez-Castro, Ana Elena, Castillo, Pablo Soriano, Milón, Pohl

“…Rapid Diagnostic Tests (RDTs) for malaria are restricted to a few biomarkers and antibody-mediated detection. However, the expression of commonly used…”
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The Stringent Response Inhibits 70S Ribosome Formation in Staphylococcus aureus by Impeding GTPase-Ribosome Interactions by Bennison, Daniel J, Nakamoto, Jose A, Craggs, Timothy D, Milón, Pohl, Rafferty, John B, Corrigan, Rebecca M

“…During nutrient limitation, bacteria produce the alarmones (p)ppGpp as effectors of a stress signaling network termed the stringent response. RsgA, RbgA, Era,…”
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Unlocking SARS-CoV-2 detection in low- and middle-income countries by Alcántara, Roberto, Peñaranda, Katherin, Mendoza-Rojas, Gabriel, Nakamoto, Jose A., Martins-Luna, Johanna, del Valle-Mendoza, Juana, Adaui, Vanessa, Milón, Pohl

“…Low- and middle-income countries (LMICs) are significantly affected by SARS-CoV-2, partially due to their limited capacity for local production and…”
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UnCovid: A versatile, low-cost, and open-source protocol for SARS-CoV-2 RNA detection by Alcántara, Roberto, Peñaranda, Katherin, Mendoza-Rojas, Gabriel, Nakamoto, Jose A., Dueñas, Eva, Alvarez, Daniela, Adaui, Vanessa, Milón, Pohl

“…Here, we describe a detailed step-by-step protocol to detect SARS-CoV-2 RNA using RT-PCR-mediated amplification and CRISPR/Cas-based visualization. The…”
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A low-cost and open-source protocol to produce key enzymes for molecular detection assays by Mendoza-Rojas, Gabriel, Sarabia-Vega, Vanessa, Sanchez-Castro, Ana, Tello, Lesia, Cabrera-Sosa, Luis, Nakamoto, Jose A., Peñaranda, Katherin, Adaui, Vanessa, Alcántara, Roberto, Milón, Pohl

“…Here, we describe a detailed step-by-step protocol for the expression, purification, quantification, and activity determination of key enzymes for molecular…”
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The native ABC-F proteins of Staphylococcus aureus do not contribute to intrinsic resistance against ribosome-targeting antibacterial drugs by Galarion, Luiza H, Trigwell, James, Mohamad, Merianne, Nakamoto, Jose A, Clarke, Justin E, Atkinson, Gemma C, O’Neill, Alex J

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The dynamic cycle of bacterial translation initiation factor IF3 by Nakamoto, Jose A, Evangelista, Wilfredo, Vinogradova, Daria S, Konevega, Andrey L, Spurio, Roberto, Fabbretti, Attilio, Milón, Pohl

“…Abstract Initiation factor IF3 is an essential protein that enhances the fidelity and speed of bacterial mRNA translation initiation. Here, we describe the…”
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The structural basis of hyperpromiscuity in a core combinatorial network of type II toxin-antitoxin and related phage defense systems by Ernits, Karin, Saha, Chayan Kumar, Brodiazhenko, Tetiana, Chouhan, Bhanu, Shenoy, Aditi, Buttress, Jessica A, Duque-Pedraza, Julián J, Bojar, Veda, Nakamoto, Jose A, Kurata, Tatsuaki, Egorov, Artyom A, Shyrokova, Lena, Johansson, Marcus J O, Mets, Toomas, Rustamova, Aytan, Džigurski, Jelisaveta, Tenson, Tanel, Garcia-Pino, Abel, Strahl, Henrik, Elofsson, Arne, Hauryliuk, Vasili, Atkinson, Gemma C

“…Toxin-antitoxin (TA) systems are a large group of small genetic modules found in prokaryotes and their mobile genetic elements. Type II TAs are encoded as…”
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Mechanism of phage sensing and restriction by toxin-antitoxin-chaperone systems by Mets, Toomas, Kurata, Tatsuaki, Ernits, Karin, Johansson, Marcus J O, Craig, Sophie Z, Evora, Gabriel Medina, Buttress, Jessica A, Odai, Roni, Wallant, Kyo Coppieters't, Nakamoto, Jose A, Shyrokova, Lena, Egorov, Artyom A, Doering, Christopher Ross, Brodiazhenko, Tetiana, Laub, Michael T, Tenson, Tanel, Strahl, Henrik, Martens, Chloe, Harms, Alexander, Garcia-Pino, Abel, Atkinson, Gemma C, Hauryliuk, Vasili

“…Toxin-antitoxins (TAs) are prokaryotic two-gene systems composed of a toxin neutralized by an antitoxin. Toxin-antitoxin-chaperone (TAC) systems additionally…”
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