Search Results - "Nagy, László G"

Complex multicellularity in fungi: evolutionary convergence, single origin, or both? by Nagy, László G., Kovács, Gábor M., Krizsán, Krisztina

“…ABSTRACT Complex multicellularity represents the most advanced level of biological organization and it has evolved only a few times: in metazoans, green…”
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Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi by Sánchez-García, Marisol, Ryberg, Martin, Khan, Faheema Kalsoom, Varga, Torda, Nagy, László G., Hibbett, David S.

“…With ∼36,000 described species, Agaricomycetes are among the most successful groups of Fungi. Agaricomycetes display great diversity in fruiting body forms and…”
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Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi by Knapp, Dániel G., Németh, Julianna B., Barry, Kerrie, Hainaut, Matthieu, Henrissat, Bernard, Johnson, Jenifer, Kuo, Alan, Lim, Joanne Hui Ping, Lipzen, Anna, Nolan, Matt, Ohm, Robin A., Tamás, László, Grigoriev, Igor V., Spatafora, Joseph W., Nagy, László G., Kovács, Gábor M.

“…Dark septate endophytes (DSE) are a form-group of root endophytic fungi with elusive functions. Here, the genomes of two common DSE of semiarid areas,…”
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Many roads to convergence by Nagy, László G

“…Plant genomes highlight complex mechanisms behind evolutionary convergence Many plants form specialized symbiotic root structures, called nodules, that harbor…”
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Comparative genomics reveals the origin of fungal hyphae and multicellularity by Kiss, Enikő, Hegedüs, Botond, Virágh, Máté, Varga, Torda, Merényi, Zsolt, Kószó, Tamás, Bálint, Balázs, Prasanna, Arun N., Krizsán, Krisztina, Kocsubé, Sándor, Riquelme, Meritxell, Takeshita, Norio, Nagy, László G.

“…Hyphae represent a hallmark structure of multicellular fungi. The evolutionary origins of hyphae and of the underlying genes are, however, hardly known. By…”
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Novel phylogenetic methods are needed for understanding gene function in the era of mega-scale genome sequencing by Nagy, László G, Merényi, Zsolt, Hegedüs, Botond, Bálint, Balázs

“…Abstract Ongoing large-scale genome sequencing projects are forecasting a data deluge that will almost certainly overwhelm current analytical capabilities of…”
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Re-mind the gap! Insertion - deletion data reveal neglected phylogenetic potential of the nuclear ribosomal internal transcribed spacer (ITS) of fungi by Nagy, László G, Kocsubé, Sándor, Csanádi, Zoltán, Kovács, Gábor M, Petkovits, Tamás, Vágvölgyi, Csaba, Papp, Tamás

“…Rapidly evolving, indel-rich phylogenetic markers play a pivotal role in our understanding of the relationships at multiple levels of the tree of life. There…”
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Armillaria by Sipos, György, Anderson, James B., Nagy, László G.

“…Lingering in forests around the world, some of the largest and oldest terrestrial organisms on earth hide in plain sight. In this Quick Guide, Sipos et al…”
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution by Nagy, László G, Riley, Robert, Bergmann, Philip J, Krizsán, Krisztina, Martin, Francis M, Grigoriev, Igor V, Cullen, Dan, Hibbett, David S

“…Fungal decomposition of plant cell walls (PCW) is a complex process that has diverse industrial applications and huge impacts on the carbon cycle. White rot…”
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ContScout: sensitive detection and removal of contamination from annotated genomes by Bálint, Balázs, Merényi, Zsolt, Hegedüs, Botond, Grigoriev, Igor V., Hou, Zhihao, Földi, Csenge, Nagy, László G.

“…Contamination of genomes is an increasingly recognized problem affecting several downstream applications, from comparative evolutionary genomics to…”
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Evolutionary Morphogenesis of Sexual Fruiting Bodies in Basidiomycota: Toward a New Evo-Devo Synthesis by Virágh, Máté, Merényi, Zsolt, Csernetics, Árpád, Földi, Csenge, Sahu, Neha, Liu, Xiao-Bin, Hibbett, David S, Nagy, László G

“…The development of sexual fruiting bodies is one of the most complex morphogenetic processes in fungi. Mycologists have long been fascinated by the…”
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Mycology: Rediscovery of a lost model fungus highlights the origin of mycorrhizal symbioses by Nagy, László G., Kovács, Gábor M.

“…Arbuscular mycorrhizae (AM) are the most frequent symbioses of land plants. By reisolating a long-lost fungus from nature, a new study cracks the genomics of…”
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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi by Looney, Brian, Miyauchi, Shingo, Morin, Emmanuelle, Drula, Elodie, Courty, Pierre Emmanuel, Kohler, Annegret, Kuo, Alan, LaButti, Kurt, Pangilinan, Jasmyn, Lipzen, Anna, Riley, Robert, Andreopoulos, William, He, Guifen, Johnson, Jenifer, Nolan, Matt, Tritt, Andrew, Barry, Kerrie W., Grigoriev, Igor V., Nagy, László G., Hibbett, David, Henrissat, Bernard, Matheny, P. Brandon, Labbé, Jesse, Martin, Francis M.

“…Summary The ectomycorrhizal (ECM) symbiosis has independently evolved from diverse types of saprotrophic ancestors. In this study, we seek to identify genomic…”
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Transcriptome data reveal conserved patterns of fruiting body development and response to heat stress in the mushroom-forming fungus Flammulina filiformis by Liu, Xiao-Bin, Xia, En-Hua, Li, Meng, Cui, Yang-Yang, Wang, Pan-Meng, Zhang, Jin-Xia, Xie, Bao-Gui, Xu, Jian-Ping, Yan, Jun-Jie, Li, Jing, Nagy, László G, Yang, Zhu L, Borkovich, Katherine A

“…Mushroom-forming fungi are complex multicellular organisms that form the basis of a large industry, yet, our understanding of the mechanisms of mushroom…”
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Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts by Nagy, László G., Ohm, Robin A., Kovács, Gábor M., Floudas, Dimitrios, Riley, Robert, Gácser, Attila, Sipiczki, Mátyás, Davis, John M., Doty, Sharon L., de Hoog, G Sybren, Lang, B. Franz, Spatafora, Joseph W., Martin, Francis M., Grigoriev, Igor V., Hibbett, David S.

“…Convergent evolution is common throughout the tree of life, but the molecular mechanisms causing similar phenotypes to appear repeatedly are obscure. Yeasts…”
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay by Hage, Hayat, Miyauchi, Shingo, Virágh, Máté, Drula, Elodie, Min, Byoungnam, Chaduli, Delphine, Navarro, David, Favel, Anne, Norest, Manon, Lesage‐Meessen, Laurence, Bálint, Balázs, Merényi, Zsolt, Eugenio, Laura, Morin, Emmanuelle, Martínez, Angel T., Baldrian, Petr, Štursová, Martina, Martínez, María Jesús, Novotny, Cenek, Magnuson, Jon K., Spatafora, Joey W., Maurice, Sundy, Pangilinan, Jasmyn, Andreopoulos, Willian, LaButti, Kurt, Hundley, Hope, Na, Hyunsoo, Kuo, Alan, Barry, Kerrie, Lipzen, Anna, Henrissat, Bernard, Riley, Robert, Ahrendt, Steven, Nagy, László G., Grigoriev, Igor V., Martin, Francis, Rosso, Marie‐Noëlle

“…Summary Because they comprise some of the most efficient wood‐decayers, Polyporales fungi impact carbon cycling in forest environment. Despite continuous…”
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Understanding the Evolutionary Processes of Fungal Fruiting Bodies: Correlated Evolution and Divergence Times in the Psathyrellaceae by Nagy, László G., Walther, Grit, Házi, Judit, Vágvölgyi, Csaba, Papp, Tamás

“…Fruiting body evolution is one of the central topics in fungal evolutionary biology. A number of hypotheses have been developed to explain the contemporary…”
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Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales by Wu, Gang, Miyauchi, Shingo, Morin, Emmanuelle, Kuo, Alan, Drula, Elodie, Varga, Torda, Kohler, Annegret, Feng, Bang, Cao, Yang, Lipzen, Anna, Daum, Christopher, Hundley, Hope, Pangilinan, Jasmyn, Johnson, Jenifer, Barry, Kerrie, LaButti, Kurt, Ng, Vivian, Ahrendt, Steven, Min, Byoungnam, Choi, In‐Geol, Park, Hongjae, Plett, Jonathan M., Magnuson, Jon, Spatafora, Joseph W., Nagy, László G., Henrissat, Bernard, Grigoriev, Igor V., Yang, Zhu‐Liang, Xu, Jianping, Martin, Francis M.

“…Summary We aimed to identify genomic traits of transitions to ectomycorrhizal ecology within the Boletales by comparing the genomes of 21 symbiotrophic species…”
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Unmatched Level of Molecular Convergence among Deeply Divergent Complex Multicellular Fungi by Merényi, Zsolt, Prasanna, Arun N, Wang, Zheng, Kovács, Károly, Hegedüs, Botond, Bálint, Balázs, Papp, Balázs, Townsend, Jeffrey P, Nagy, László G

“…Convergent evolution is pervasive in nature, but it is poorly understood how various constraints and natural selection limit the diversity of evolvable…”
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Evolution of opposing regulatory interactions underlies the emergence of eukaryotic cell cycle checkpoints by Hernansaiz-Ballesteros, Rosa D., Földi, Csenge, Cardelli, Luca, Nagy, László G., Csikász-Nagy, Attila

“…In eukaryotes the entry into mitosis is initiated by activation of cyclin-dependent kinases (CDKs), which in turn activate a large number of protein kinases to…”
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