Search Results - "Murukarthick, Jayakodi"
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Ginseng Genome Database: an open-access platform for genomics of Panax ginseng
Published in BMC plant biology (12-04-2018)“…The ginseng (Panax ginseng C.A. Meyer) is a perennial herbaceous plant that has been used in traditional oriental medicine for thousands of years…”
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Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing
Published in BMC genomics (02-01-2015)“…The honey bee is an important model system for increasing understanding of molecular and neural mechanisms underlying social behaviors relevant to the…”
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Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species
Published in Scientific reports (28-10-2015)“…Cytoplasmic chloroplast (cp) genomes and nuclear ribosomal DNA (nR) are the primary sequences used to understand plant diversity and evolution. We introduce a…”
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Mitochondrial plastid DNA can cause DNA barcoding paradox in plants
Published in Scientific reports (09-04-2020)“…The transfer of ancestral plastid genomes into mitochondrial genomes to generate mitochondrial plastid DNA (MTPT) is known to occur in plants, but its impacts…”
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Author Correction: Mitochondrial plastid DNA can cause DNA barcoding paradox in plants
Published in Scientific reports (29-04-2021)“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Comparative transcriptome analysis of heat stress responsiveness between two contrasting ginseng cultivars
Published in Journal of ginseng research (01-10-2019)“…Panax ginseng has been used in traditional medicine to strengthen the body and mental well-being of humans for thousands of years. Many elite ginseng cultivars…”
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Comprehensive analysis of Panax ginseng root transcriptomes
Published in BMC plant biology (12-06-2015)“…Korean ginseng (Panax ginseng C.A. Meyer) is a highly effective medicinal plant containing ginsenosides with various pharmacological activities, whose roots…”
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High-Resolution Mapping of Barley mild mosaic virus Resistance Gene rym15
Published in Frontiers in plant science (02-06-2022)“…(BaYMV) and (BaMMV), which are transmitted by the soil-borne plasmodiophorid , cause high yield losses in barley. In previous studies, the recessive BaMMV…”
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Re-exploration of U’s Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences
Published in Scientific reports (09-05-2018)“…The concept of U’s triangle, which revealed the importance of polyploidization in plant genome evolution, described natural allopolyploidization events in…”
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Integrated Transcriptomic and Metabolomic Analysis of Five Panax ginseng Cultivars Reveals the Dynamics of Ginsenoside Biosynthesis
Published in Frontiers in plant science (19-06-2017)“…C.A. Meyer is a traditional medicinal herb that produces bioactive compounds such as ginsenosides. Here, we investigated the diversity of ginsenosides and…”
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Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map
Published in BMC genomics (22-02-2014)“…Expressed sequence tag (EST)-based markers are preferred because they reflect transcribed portions of the genome. We report the development of simple sequence…”
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Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea
Published in PloS one (01-04-2014)“…Miniature inverted-repeat transposable elements (MITEs) are ubiquitous, non-autonomous class II transposable elements. Here, we conducted genome-wide…”
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Transcriptome analysis reveals in vitro cultured Withania somnifera leaf and root tissues as a promising source for targeted withanolide biosynthesis
Published in BMC genomics (22-01-2015)“…The production of metabolites via in vitro culture is promoted by the availability of fully defined metabolic pathways. Withanolides, the major bioactive…”
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Optimization of Genotyping‐by‐Sequencing (GBS) for Germplasm Fingerprinting and Trait Mapping in Faba Bean
Published in Legume science (01-09-2024)“…ABSTRACT Faba bean (Vicia faba L.) is an important pulse crop with a wide range of agroecological adaptations. The development of genomic tools and a…”
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Dynamic Transcriptome Profiling of Mungbean Genotypes Unveil the Genes Respond to the Infection of Mungbean Yellow Mosaic Virus
Published in Pathogens (Basel) (30-01-2022)“…Yellow mosaic disease (YMD), incited by mungbean yellow mosaic virus (MYMV), is a primary viral disease that reduces mungbean production in South Asia,…”
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Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots
Published in Journal of ginseng research (15-10-2014)“…Panax ginseng Meyer is a traditional medicinal plant famous for its strong therapeutic effects and serves as an important herbal medicine. To understand and…”
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Comparative analysis of the transcriptomes and primary metabolite profiles of adventitious roots of five Panax ginseng cultivars
Published in Journal of ginseng research (01-01-2017)“…Various Panax ginseng cultivars exhibit a range of diversity for morphological and physiological traits. However, there are few studies on diversity of…”
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Building pan-genome infrastructures for crop plants and their use in association genetics
Published in DNA research (19-01-2021)“…Pan-genomic studies aim at representing the entire sequence diversity within a species to provide useful resources for evolutionary studies, functional…”
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Plant pangenomes for crop improvement, biodiversity and evolution
Published in Nature reviews. Genetics (01-08-2024)“…Plant genome sequences catalogue genes and the genetic elements that regulate their expression. Such inventories further research aims as diverse as mapping…”
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