Search Results - "Murshed, Hasan"

Transcriptome analysis reveals increased abundance and diversity of opportunistic fungal pathogens in nasopharyngeal tract of COVID-19 patients by Hoque, M Nazmul, Rahman, M Shaminur, Sarkar, Md Murshed Hasan, Habib, Md Ahashan, Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Hossain, M Anwar, Khan, M Salim, Islam, Tofazzal

“…We previously reported that SARS-CoV-2 infection reduces human nasopharyngeal commensal microbiomes (bacteria, archaea and commensal respiratory viruses) with…”
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SARS-CoV-2 infection reduces human nasopharyngeal commensal microbiome with inclusion of pathobionts by Hoque, M. Nazmul, Sarkar, Md. Murshed Hasan, Rahman, M. Shaminur, Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Hossain, M. Saddam, Shamsuzzaman, A. K. Mohammad, Nafisa, Tasnim, Molla, M. Maruf Ahmed, Yeasmin, Mahmuda, Ghosh, Asish Kumar, Osman, Eshrar, Alam, S. K. Saiful, Uzzaman, Mohammad Samir, Habib, Md Ahashan, Mahmud, Abu Sayeed Mohammad, Crandall, Keith A., Islam, Tofazzal, Khan, Md. Salim

“…The microbiota of the nasopharyngeal tract (NT) play a role in host immunity against respiratory infectious diseases. However, scant information is available…”
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In silico exploration of Serratia sp. BRL41 genome for detecting prodigiosin Biosynthetic Gene Cluster (BGC) and in vitro antimicrobial activity assessment of secreted prodigiosin by Boby, Farhana, Bhuiyan, Md. Nurul Huda, Saha, Barun Kanti, Dey, Subarna Sandhani, Saha, Anik Kumar, Islam, Md Jahidul, Bashera, Mahci Al, Moulick, Shyama Prosad, Jahan, Farhana, Zaman, Md. Asad Uz, Chowdhury, Sanjana Fatema, Naser, Showti Raheel, Khan, Md. Salim, Sarkar, Md. Murshed Hasan

“…The raising concern of drug resistance, having substantial impacts on public health, has instigated the search of new natural compounds with substantial…”
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Phenotypic characterization and genomic analysis of a Salmonella phage L223 for biocontrol of Salmonella spp. in poultry by Khan, Md Abu Sayem, Islam, Zahidul, Barua, Chayan, Sarkar, Md. Murshed Hasan, Ahmed, Md. Firoz, Rahman, Sabita Rezwana

“…The escalating incidence of foodborne salmonellosis poses a significant global threat to food safety and public health. As antibiotic resistance in Salmonella…”
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Genomic characterization of the dominating Beta, V2 variant carrying vaccinated (Oxford−AstraZeneca) and nonvaccinated COVID‐19 patient samples in Bangladesh: A metagenomics and whole‐genome approach by Rahaman, Md. Mizanur, Sarkar, Md. Murshed Hasan, Rahman, M. Shaminur, Islam, M. Rafiul, Islam, Israt, Saha, Otun, Akter, Shahina, Banu, Tanjian Akhtar, Jahan, Iffat, Habib, Md. Ahasan, Goswami, Barna, Bari, Latiful, Malek, Md Abdul, Khan, Md. Salim

“…Bangladesh is experiencing a second wave of COVID‐19 since March 2021, despite the nationwide vaccination drive with ChAdOx1 (Oxford−AstraZeneca) vaccine from…”
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M gene targeted qRT-PCR approach for SARS-CoV-2 virus detection by Sarkar, Md. Murshed Hasan, Naser, Showti Raheel, Chowdhury, Sanjana Fatema, Khan, Md. Salim, Habib, Md. Ahashan, Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Nayem, Maksudur Rahman, Hassan, Md. Akibul, Khan, Md. Imran, Rabbi, Mohammad Fazle Alam, Ahsan, Chowdhury Rafiqul, Miah, Md. Ibrahim, Nessa, Afzalun, Islam, S. M. Rashed Ul, Rahman, Mohammed Atiqur, Shaikh, Md. Aftab Ali, Ahmed, Md. Sharfuddin

“…Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) is the gold standard method for SARS-CoV-2 detection, and several qRT-PCR kits have been…”
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A multicentre study reveals dysbiosis in the microbial co-infection and antimicrobial resistance gene profile in the nasopharynx of COVID-19 patients by Mahmud, A. Sayeed. M., Seers, Christine A., Shaikh, Aftab Ali, Taznin, Tarannum, Uzzaman, Mohammad Samir, Osman, Eshrar, Habib, Md. Ahashan, Akter, Shahina, Banu, Tanjina Akhtar, Sarkar, Md. Murshed Hasan, Goswami, Barna, Jahan, Iffat, Okeoma, Chioma M., Khan, Md. Salim, Reynolds, Eric C.

“…The impact of SARS-CoV-2 infection on the nasopharyngeal microbiome has not been well characterised. We sequenced genetic material extracted from…”
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Differential gene expression profiling reveals potential biomarkers and pharmacological compounds against SARS-CoV-2: Insights from machine learning and bioinformatics approaches by Hoque, M. Nazmul, Sarkar, Md. Murshed Hasan, Khan, Md. Arif, Hossain, Md. Arju, Hasan, Md. Imran, Rahman, Md. Habibur, Habib, Md. Ahashan, Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Nafisa, Tasnim, Molla, Md. Maruf Ahmed, Soliman, Mahmoud E., Araf, Yusha, Khan, M. Salim, Zheng, Chunfu, Islam, Tofazzal

“…The COVID-19 pandemic, caused by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), has created an urgent global situation. Therefore, it is…”
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Comparative phylogenetic analysis and transcriptomic profiling of Dengue (DENV-3 genotype I) outbreak in 2021 in Bangladesh by Sarkar, Md Murshed Hasan, Rahman, M Shaminur, Islam, M Rafiul, Rahman, Arafat, Islam, Md Shariful, Banu, Tanjina Akhtar, Akter, Shahina, Goswami, Barna, Jahan, Iffat, Habib, Md Ahashan, Uddin, Mohammad Mohi, Mia, Md Zakaria, Miah, Md Ibrahim, Shaikh, Aftab Ali, Khan, Md Salim

“…Abstract Background The next-generation sequencing (NGS) technology facilitates in-depth study of host-pathogen metatranscriptome. We, therefore, implicated…”
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Correction to: Comparative phylogenetic analysis and transcriptomic profiling of dengue (DENV-3 genotype I) outbreak in 2021 in Bangladesh by Sarkar, Md. Murshed Hasan, Rahman, M. Shaminur, Rafiul, M, Rahman, Arafat, Islam, Md. Shariful, Banu, Tanjina Akhtar, Akter, Shahina, Goswami, Barna, Jahan, Iffat, Habib, Md. Ahashan, Uddin, Mohammad Mohi, Mia, Md. Zakaria, Miah, Md. Ibrahim, Shaikh, Md Aftab Ali, Khan, Md. Salim

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Spike protein mutations and structural insights of pangolin lineage B.1.1.25 with implications for viral pathogenicity and ACE2 binding affinity by Akter, Shahina, Oliveira, Jonas Ivan Nobre, Barton, Carl, Sarkar, Murshed Hasan, Shahab, Muhammad, Banu, Tanjina Akhtar, Goswami, Barna, Osman, Eshrar, Uzzaman, Mohammad Samir, Nafisa, Tasnim, Molla, Maruf Ahmed, Yeasmin, Mahmuda, Farzana, Maisha, Habib, Ahashan, Shaikh, Aftab Ali, Khan, Salim

“…Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), the causative agent of COVID -19, is constantly evolving, requiring continuous genomic…”
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Immunoinformatics approach to epitope-based vaccine design against the SARS-CoV-2 in Bangladeshi patients by Akter, Shahina, Shahab, Muhammad, Sarkar, Md. Murshed Hasan, Hayat, Chandni, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Osman, Eshrar, Uzzaman, Mohammad Samir, Habib, Md Ahashan, Shaikh, Aftab Ali, Khan, Md. Salim

“…Abstract Background Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the causative agent of the ongoing coronavirus disease 2019 (COVID-19)…”
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A rare homozygous ALX4 mutation in a Bangladeshi girl with frontonasal dysplasia type-2 (FND2) by Goswami, Barna, Rahman, Asifur, Jahan, Iffat, Akter, Shahina, Banu, Tanjina Akhtar, Osman, Eshrar, Uzzaman, Mohammad Samir, Habib, Ahashan, Alam, Md Shamsul, Mohammad Abu Obaida, Abu Saleh, Hasan Sarkar, Md Murshed, Khan, Salim

“…Frontonasal dysplasia type-2(FND2), a rare phenotypically variable and heterogeneous developmental anomaly resulting from mutation of the ALX4 gene, is…”
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Computational design of medicinal compounds to inhibit RBD-hACE2 interaction in the Omicron variant: unveiling a vulnerable target site by Shahab, Muhammad, Akter, Shahina, Sarkar, Md Murshed Hasan, Banu, Tanjina Akhtar, Goswami, Barna, Chowdhury, Sanjana Fatema, Naser, Showti Raheel, Habib, Md Ahashan, Shaikh, Aftab Ali, Saki, Morteza, Zheng, Guojun, Khan, Md Salim

“…The COVID-19 pandemic, caused by SARS-CoV-2, has globally affected both human health and economy. Several variants with a high potential for reinfection and…”
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Coding-Complete Genome Sequences of Three SARS-CoV-2 Strains from Bangladesh by Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Osman, Eshrar, Uzzaman, Mohammad Samir, Habib, M Ahashan, Jahan, Iffat, Mahmud, Abu Sayeed Mohammad, Sarker, M Murshed Hasan, Hossain, M Saddam, Shamsuzzaman, A K Mohammad, Nafisa, Tasnim, Molla, M Maruf Ahmed, Yeasmin, Mahmuda, Ghosh, Asish Kumar, Al Din, Sheikh M Selim, Ray, Utpal Chandra, Sajib, Salek Ahmed, Hossain, Maqsud, Khan, M Salim

“…We report the sequencing of three severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genomes from Bangladesh. We have identified a unique mutation…”
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Dose and volume reduction for normal lung using intensity-modulated radiotherapy for advanced-stage non-small-cell lung cancer by Murshed, Hasan, Liu, H Helen, Liao, Zhongxing, Barker, Jerry L, Wang, Xiaochun, Tucker, Susan L, Chandra, Anurag, Guerrero, Thomas, Stevens, Craig, Chang, Joe Y, Jeter, Melinda, Cox, James D, Komaki, Ritsuko, Mohan, Radhe, Change, Joe Y

“…To investigate dosimetric improvements with respect to tumor-dose conformity and normal tissue sparing using intensity-modulated radiotherapy (IMRT) compared…”
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Genome Sequencing of the SARS-CoV-2 Delta (B.1.617.2) Variant of Concern Detected in Bangladesh by Banu, Tanjina Akhtar, Sarkar, M Murshed Hasan, Akter, Shahina, Goswami, Barna, Jahan, Iffat, Osman, Eshrar, Uzzaman, Mohammad Samir, Habib, M Ahashan, Mahmud, Abu Sayeed Mohammad, Uddin, Mohammad Mohi, Nafisa, Tasnim, Molla, M Maruf Ahmed, Yeasmin, Mahmuda, Akram, Arifa, Khan, M Salim

“…We report the near-complete genome sequence and phylogenetic analysis of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Delta variant…”
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Prevalence of hepatitis B and C, and syphilis among aspirant migrant workers of Bangladesh by Afroz, Jinia, Jubyda, Fatema Tuz, Sharmin, Sanzida, Rana, Masud, Dey, Amit Kumar, Farzana, Tasmia, Sarkar, Murshed Hasan

“…In Bangladesh, labour migration is a source of employment and workers' remittances are critical to poverty mitigation. The aim of this study was to assess the…”
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Genome Sequence of a SARS-CoV-2 P.1 Variant of Concern (20J/501Y.V3) from Bangladesh by Sarkar, M. Murshed Hasan, Rabbi, Mohammad Fazle Alam, Akter, Shahina, Banu, Tanjina Akhtar, Goswami, Barna, Jahan, Iffat, Hossain, M. Saddam, Osman, Eshrar, Uzzaman, Mohammad Samir, Habib, M. Ahashan, Mahmud, Abu Sayeed Mohammad, Kabir, Firoz, Hasan, Kazi Nadim, Rahman, M. Mizanur, Khaleque, M. Abdul, Akhteruzzaman, Sharif, Khan, M. Salim

“…This study reports the coding-complete genome sequence, with variant identifications and phylogenetic analysis, of a severe acute respiratory syndrome…”
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Feasibility of using intensity-modulated radiotherapy to improve lung sparing in treatment planning for distal esophageal cancer by Chandra, Anurag, Guerrero, Thomas M., Liu, H. Helen, Tucker, Susan L., Liao, Zhongxing, Wang, Xiaochun, Murshed, Hasan, Bonnen, Mark D., Garg, Amit K., Stevens, Craig W., Chang, Joe Y., Jeter, Melinda D., Mohan, Radhe, Cox, James D., Komaki, Ritsuko

“…To evaluate the feasibility whether intensity-modulated radiotherapy (IMRT) can be used to reduce doses to normal lung than three-dimensional conformal…”
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