Search Results - "Murmu, Sneha"
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A review of artificial intelligence-assisted omics techniques in plant defense: current trends and future directions
Published in Frontiers in plant science (05-03-2024)“…Plants intricately deploy defense systems to counter diverse biotic and abiotic stresses. Omics technologies, spanning genomics, transcriptomics, proteomics,…”
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A review on bioinformatics advances in CRISPR-Cas technology
Published in Journal of plant biochemistry and biotechnology (01-12-2023)“…CRISPR-Cas (Clustered Regularly Interspaced Short Palindromic Repeats-CRISPR associated) system exists in archaeal and bacterial cells as an adaptive immune…”
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Insilico generation of novel ligands for the inhibition of SARS-CoV-2 main protease (3CLpro) using deep learning
Published in Frontiers in microbiology (23-06-2023)“…The recent emergence of novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causing the coronavirus disease (COVID-19) has become a global…”
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MethSemble-6mA: an ensemble-based 6mA prediction server and its application on promoter region of LBD gene family in Poaceae
Published in Frontiers in plant science (09-10-2023)“…The Lateral Organ Boundaries Domain (LBD) containing genes are a set of plant-specific transcription factors and are crucial for controlling both organ…”
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Prediction of protein–protein interactions between anti-CRISPR and CRISPR-Cas using machine learning technique
Published in Journal of plant biochemistry and biotechnology (01-12-2023)“…CRISPR-Cas system, responsible for bacterial adaptive immune response, has evolved as the game-changer in the field of genome editing and has revolutionized…”
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Biocomputational Assessment of Natural Compounds as a Potent Inhibitor to Quorum Sensors in Ralstonia solanacearum
Published in Molecules (Basel, Switzerland) (09-05-2022)“…is among the most damaging bacterial phytopathogens with a wide number of hosts and a broad geographic distribution worldwide. The pathway of phenotype…”
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Combatting insects mediated biotic stress through plant associated endophytic entomopathogenic fungi in horticultural crops
Published in Frontiers in plant science (19-01-2023)“…Horticultural production is a vital catalyst for economic growth, yet insect infestations reduce horticultural crop yield and quality. Pesticides and other…”
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Dataset on double mutation in PGIP of Glycine max improves defense to PG of Sclerotinia sclerotiorum
Published in Data in brief (01-06-2024)“…The cell wall of the Glycine max altered by the polygalacturonases (PGs) secreted by the fungus Sclerotinia sclerotiorum, causes disease and quality losses. In…”
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Underutilized legumes: nutrient status and advanced breeding approaches for qualitative and quantitative enhancement
Published in Frontiers in nutrition (Lausanne) (18-05-2023)“…Underutilized/orphan legumes provide food and nutritional security to resource-poor rural populations during periods of drought and extreme hunger, thus,…”
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Genome-Wide Identification and Characterization of Trihelix Gene Family in Asian and African Vigna Species
Published in Agriculture (Basel) (01-12-2022)“…Trihelix transcription factors play a crucial role in varied stress responses as well as in the growth and development of plants. The role of trihelix…”
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In-silico study of protein-protein interactions in wheat blast using docking and molecular dynamics simulation approach
Published in Journal of biomolecular structure & dynamics (23-07-2024)“…Despite advancements in agricultural research and the introduction of modern biotechnological and farming techniques, food security remains a significant…”
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Unraveling the Aurora kinase A and Epstein-Barr nuclear antigen 1 axis in Epstein Barr virus associated gastric cancer
Published in Virology (New York, N.Y.) (01-11-2023)“…Aurora kinase A (AURKA) is one of the crucial cell cycle regulators associated with gastric cancer. Here, we explored Epstein Barr Virus-induced gastric cancer…”
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Targeting Epstein‐Barr Virus dUTPase, an Immunomodulatory Protein Using Antiviral, Anti‐Inflammatory, and Neuroprotective Phytochemicals
Published in Chemistry & biodiversity (01-09-2022)“…Although primary infection of Epstein‐Barr virus is generally non‐lethal, viral reactivation is often associated with fatal outcomes. Regardless, there is no…”
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In silico screening of phytoconstituents as potential anti-inflammatory agents targeting NF-κB p65: an approach to promote burn wound healing
Published in Journal of biomolecular structure & dynamics (29-01-2024)“…Chronic burn wounds are frequently characterised by a prolonged and dysregulated inflammatory phase that is mediated by over-activation of NF-κB p65. Synthetic…”
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Melatonin mediated abiotic stress mitigation in plants: A comprehensive study from biochemical to omics cascades
Published in South African journal of botany (01-07-2024)“…•Plants are constantly subjected to a number of abiotic stresses, such as moisture stress, soil salinity, heavy metal toxicity, and heat stress.•Abiotic…”
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In silico mutation of aromatic with aliphatic amino acid residues in Clostridium perfringens epsilon toxin (ETX) reduces its binding efficiency to Caprine Myelin and lymphocyte (MAL) protein receptors
Published in Journal of biomolecular structure & dynamics (23-03-2024)“…Enterotoxaemia (ET) is a severe disease that affects domestic ruminants, including sheep and goats, and is caused by Clostridium perfringens type B and D…”
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Enhanced Disease Resistance Mechanism of the CmoAP2/ERF Transcription Factor in Pumpkin through Genetic Mutations
Published in ACS omega (14-11-2024)Get full text
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In silico generation of novel ligands for the inhibition of SARS-CoV-2 main protease (3CL pro ) using deep learning
Published in Frontiers in microbiology (2023)“…The recent emergence of novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causing the coronavirus disease (COVID-19) has become a global…”
Get full text
Journal Article -
19
Genome-Wide Identification and Characterization of Trihelix Gene Family in Asian and African IVigna/I Species
Published in Agriculture (Basel) (01-12-2022)“…Trihelix transcription factors play a crucial role in varied stress responses as well as in the growth and development of plants. The role of trihelix…”
Get full text
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