Search Results - "Mouncey, Nigel J."

RIViT-seq enables systematic identification of regulons of transcriptional machineries by Otani, Hiroshi, Mouncey, Nigel J.

“…Transcriptional regulation is a critical process to ensure expression of genes necessary for growth and survival in diverse environments. Transcription is…”
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Comparative and pangenomic analysis of the genus Streptomyces by Otani, Hiroshi, Udwary, Daniel W., Mouncey, Nigel J.

“…Streptomycetes are highly metabolically gifted bacteria with the abilities to produce bioproducts that have profound economic and societal importance. These…”
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New keys to unlock the treasure trove of microbial natural products by Udwary, Daniel W., Otani, Hiroshi, Mouncey, Nigel J.

“…This month’s Genome Watch highlights how recent advances in computational identification of biosynthetic gene clusters (BGCs), and in their experimental…”
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The National Microbiome Data Collaborative: enabling microbiome science by Wood-Charlson, Elisha M., Anubhav, Auberry, Deanna, Blanco, Hannah, Borkum, Mark I., Corilo, Yuri E., Davenport, Karen W., Deshpande, Shweta, Devarakonda, Ranjeet, Drake, Meghan, Duncan, William D., Flynn, Mark C., Hays, David, Hu, Bin, Huntemann, Marcel, Li, Po-E, Lipton, Mary, Lo, Chien-Chi, Millard, David, Miller, Kayd, Piehowski, Paul D., Purvine, Samuel, Reddy, T.B.K., Shakya, Migun, Sundaramurthi, Jagadish Chandrabose, Vangay, Pajau, Wei, Yaxing, Wilson, Bruce E., Canon, Shane, Chain, Patrick S. G., Fagnan, Kjiersten, Martin, Stanton, McCue, Lee Ann, Mungall, Christopher J., Mouncey, Nigel J., Maxon, Mary E., Eloe-Fadrosh, Emiley A.

“…To harness the potential of microbiome science across the broad range of relevant disciplines, new approaches to data infrastructure and transdisciplinary…”
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Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery by Hurley, Amanda, Chevrette, Marc G, Acharya, Deepa D, Lozano, Gabriel L, Garavito, Manuel, Heinritz, Jen, Balderrama, Luis, Beebe, Mara, DenHartog, Martel L, Corinaldi, Kamiyah, Engels, Renee, Gutierrez, Alyssa, Jona, Orli, Putnam, Josephine H I, Rhodes, Brody, Tsang, Tiffany, Hernandez, Simon, Bascom-Slack, Carol, Blum, Jessamina E, Price, Paul A, Davis, Debra, Klein, Joanna, Pultorak, Joshua, Sullivan, Nora L, Mouncey, Nigel J, Dorrestein, Pieter C, Miller, Sarah, Broderick, Nichole A, Handelsman, Jo

“…The world faces two seemingly unrelated challenges-a shortfall in the STEM workforce and increasing antibiotic resistance among bacterial pathogens. We address…”
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Metabolic Engineering of Gluconobacter oxydans for Improved Growth Rate and Growth Yield on Glucose by Elimination of Gluconate Formation by KRAJEWSKI, Vera, SIMIC, Petra, MOUNCEY, Nigel J, BRINGER, Stephanie, SAHM, Hermann, BOTT, Michael

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota by Oliver, Tiffany, Varghese, Neha, Roux, Simon, Schulz, Frederik, Huntemann, Marcel, Clum, Alicia, Foster, Brian, Foster, Bryce, Riley, Robert, LaButti, Kurt, Egan, Robert, Hajek, Patrick, Mukherjee, Supratim, Ovchinnikova, Galina, Reddy, T. B. K., Calhoun, Sara, Hayes, Richard D., Rohwer, Robin R., Zhou, Zhichao, Daum, Chris, Copeland, Alex, Chen, I-Min A., Ivanova, Natalia N., Kyrpides, Nikos C., Mouncey, Nigel J., del Rio, Tijana Glavina, Grigoriev, Igor V., Hofmeyr, Steven, Oliker, Leonid, Yelick, Katherine, Anantharaman, Karthik, McMahon, Katherine D., Woyke, Tanja, Eloe-Fadrosh, Emiley A.

“…The North Temperate Lakes Long-Term Ecological Research (NTL-LTER) program has been extensively used to improve understanding of how aquatic ecosystems respond…”
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Phylogenomics and genetic analysis of solvent-producing Clostridium species by Jensen, Rasmus O., Schulz, Frederik, Roux, Simon, Klingeman, Dawn M., Mitchell, Wayne P., Udwary, Daniel, Moraïs, Sarah, Reynoso, Vinicio, Winkler, James, Nagaraju, Shilpa, De Tissera, Sashini, Shapiro, Nicole, Ivanova, Natalia, Reddy, T. B. K., Mizrahi, Itzhak, Utturkar, Sagar M., Bayer, Edward A., Woyke, Tanja, Mouncey, Nigel J., Jewett, Michael C., Simpson, Séan D., Köpke, Michael, Jones, David T., Brown, Steven D.

“…The genus Clostridium is a large and diverse group within the Bacillota (formerly Firmicutes), whose members can encode useful complex traits such as solvent…”
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IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase by Palaniappan, Krishnaveni, Chen, I-Min A, Chu, Ken, Ratner, Anna, Seshadri, Rekha, Kyrpides, Nikos C, Ivanova, Natalia N, Mouncey, Nigel J

“…Abstract Microbial secondary metabolism is a reservoir of bioactive compounds of immense biotechnological and biomedical potential. The biosynthetic machinery…”
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters by Udwary, Daniel W, Doering, Drew T, Foster, Bryce, Smirnova, Tatyana, Kautsar, Satria A, Mouncey, Nigel J

“…Abstract Secondary metabolites are small molecules produced by all corners of life, often with specialized bioactive functions with clinical and environmental…”
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Compendium of Metabolomic and Genomic Datasets for Cyanobacteria: Mined the Gap by Ferrinho, Scarlet, Connaris, Helen, Mouncey, Nigel J., Goss, Rebecca J.M.

“…Cyanobacterial blooms, producing toxic secondary metabolites, are becoming increasingly common phenomena in the face of rising global temperatures. They are…”
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Cytochromes P450 involved in bacterial RiPP biosyntheses by Kunakom, Sylvia, Otani, Hiroshi, Udwary, Daniel W, Doering, Drew T, Mouncey, Nigel J

“…Abstract   Ribosomally synthesized and post-translationally modified peptides (RiPPs) are a large class of secondary metabolites that have garnered scientific…”
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A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles by Volland, Jean-Marie, Gonzalez-Rizzo, Silvina, Gros, Olivier, Tyml, Tomáš, Ivanova, Natalia, Schulz, Frederik, Goudeau, Danielle, Elisabeth, Nathalie H., Nath, Nandita, Udwary, Daniel, Malmstrom, Rex R., Guidi-Rontani, Chantal, Bolte-Kluge, Susanne, Davies, Karen M., Jean, Maïtena R., Mansot, Jean-Louis, Mouncey, Nigel J., Angert, Esther R., Woyke, Tanja, Date, Shailesh V.

“…Cells of most bacterial species are around 2 micrometers in length, with some of the largest specimens reaching 750 micrometers. Using fluorescence, x-ray, and…”
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New voyages to explore the natural product galaxy by Mouncey, Nigel J., Otani, Hiroshi, Udwary, Daniel, Yoshikuni, Yasuo

“…Natural products are a large family of diverse and complex chemical molecules that have roles in both primary and secondary metabolism, and over 210,000…”
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Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE by Ke, Jing, Zhao, Zhiying, Coates, Cameron R., Hadjithomas, Michalis, Kuftin, Andrea, Louie, Katherine, Weller, David, Thomashow, Linda, Mouncey, Nigel J., Northen, Trent R., Yoshikuni, Yasuo

“…Phenazines (Phzs), a family of chemicals with a phenazine backbone, are secondary metabolites with diverse properties such as antibacterial, anti-fungal, or…”
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CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria by Wang, Gaoyan, Zhao, Zhiying, Ke, Jing, Engel, Yvonne, Shi, Yi-Ming, Robinson, David, Bingol, Kerem, Zhang, Zheyun, Bowen, Benjamin, Louie, Katherine, Wang, Bing, Evans, Robert, Miyamoto, Yu, Cheng, Kelly, Kosina, Suzanne, De Raad, Markus, Silva, Leslie, Luhrs, Alicia, Lubbe, Andrea, Hoyt, David W., Francavilla, Charles, Otani, Hiroshi, Deutsch, Samuel, Washton, Nancy M., Rubin, Edward M., Mouncey, Nigel J., Visel, Axel, Northen, Trent, Cheng, Jan-Fang, Bode, Helge B., Yoshikuni, Yasuo

“…It is generally believed that exchange of secondary metabolite biosynthetic gene clusters (BGCs) among closely related bacteria is an important driver of BGC…”
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An integrated workflow for phenazine-modifying enzyme characterization by Coates, R. Cameron, Bowen, Benjamin P., Oberortner, Ernst, Thomashow, Linda, Hadjithomas, Michalis, Zhao, Zhiying, Ke, Jing, Silva, Leslie, Louie, Katherine, Wang, Gaoyan, Robinson, David, Tarver, Angela, Hamilton, Matthew, Lubbe, Andrea, Feltcher, Meghan, Dangl, Jeffery L., Pati, Amrita, Weller, David, Northen, Trent R., Cheng, Jan-Fang, Mouncey, Nigel J., Deutsch, Samuel, Yoshikuni, Yasuo

“…Increasing availability of new genomes and putative biosynthetic gene clusters (BGCs) has extended the opportunity to access novel chemical diversity for…”
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes by Seshadri, Rekha, Roux, Simon, Huber, Katharina J., Wu, Dongying, Yu, Sora, Udwary, Dan, Call, Lee, Nayfach, Stephen, Hahnke, Richard L., Pukall, Rüdiger, White, James R., Varghese, Neha J., Webb, Cody, Palaniappan, Krishnaveni, Reimer, Lorenz C., Sardà, Joaquim, Bertsch, Jonathon, Mukherjee, Supratim, Reddy, T.B.K., Hajek, Patrick P., Huntemann, Marcel, Chen, I-Min A., Spunde, Alex, Clum, Alicia, Shapiro, Nicole, Wu, Zong-Yen, Zhao, Zhiying, Zhou, Yuguang, Evtushenko, Lyudmila, Thijs, Sofie, Stevens, Vincent, Eloe-Fadrosh, Emiley A., Mouncey, Nigel J., Yoshikuni, Yasuo, Whitman, William B., Klenk, Hans-Peter, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Ivanova, Natalia N.

“…The phylum Actinobacteria includes important human pathogens like Mycobacterium tuberculosis and Corynebacterium diphtheriae and renowned producers of…”
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The emergence of microbiome centres by Martiny, Jennifer B. H., Whiteson, Katrine L., Bohannan, Brendan J. M., David, Lawrence A., Hynson, Nicole A., McFall-Ngai, Margaret, Rawls, John F., Schmidt, Thomas M., Abdo, Zaid, Blaser, Martin J., Bordenstein, Seth, Bréchot, Christian, Bull, Carolee T., Dorrestein, Pieter, Eisen, Jonathan A., Garcia-Pichel, Ferran, Gilbert, Jack, Hofmockel, Kirsten S., Holtz, Mary L., Knight, Rob, Mark Welch, David B., McDonald, Daniel, Methé, Barbara, Mouncey, Nigel J., Mueller, Noel T., Pfister, Catherine A., Proctor, Lita, Sachs, Joel L.

“…As microbiome science expands, academic centres scramble to fill many needs, from service provider to industry liaison. A newly created network aims to share…”
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Cascade Regulation of Dimethyl Sulfoxide Reductase (dor) Gene Expression in the Facultative Phototroph Rhodobacter sphaeroides 2.4.1T by Mouncey, N J, Kaplan, S

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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