X‑ray Crystal Structure of rac-[Ru(phen)2dppz]2+ with d(ATGCAT)2 Shows Enantiomer Orientations and Water Ordering

We report an atomic resolution X-ray crystal structure containing both enantiomers of rac-[Ru(phen)2dppz]2+ with the d(ATGCAT)2 DNA duplex (phen = phenanthroline; dppz = dipyridophenazine). The first example of any enantiomeric pair crystallized with a DNA duplex shows different orientations of the...

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Bibliographic Details
Published in:Journal of the American Chemical Society Vol. 135; no. 34; pp. 12652 - 12659
Main Authors: Hall, James P, Cook, Daniel, Morte, Sara Ruiz, McIntyre, Patrick, Buchner, Katrin, Beer, Hanna, Cardin, David J, Brazier, John A, Winter, Graeme, Kelly, John M, Cardin, Christine J
Format: Journal Article
Language:English
Published: United States American Chemical Society 28-08-2013
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Summary:We report an atomic resolution X-ray crystal structure containing both enantiomers of rac-[Ru(phen)2dppz]2+ with the d(ATGCAT)2 DNA duplex (phen = phenanthroline; dppz = dipyridophenazine). The first example of any enantiomeric pair crystallized with a DNA duplex shows different orientations of the Λ and Δ binding sites, separated by a clearly defined structured water monolayer. Job plots show that the same species is present in solution. Each enantiomer is bound at a TG/CA step and shows intercalation from the minor groove. One water molecule is directly located on one phenazine N atom in the Δ-enantiomer only.
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ISSN:0002-7863
1520-5126
DOI:10.1021/ja403590e