Search Results - "Morozov, V. F."
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1
Reentrant melting of RNA with quenched sequence randomness
Published in Physical review letters (08-08-2014)“…The effect of quenched sequence disorder on the thermodynamics of RNA secondary structure formation is investigated for two- and four-letter alphabet models…”
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2
Correlation Function for Heteropolymers Near the Melting Temperature
Published in Journal of contemporary physics (2024)“…The stability of heterogeneous biopolymers is extremely important for maintaining their conformation and carrying out biological functions. The conformational…”
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3
Physical Adsorption of Single-Stranded DNA on Carbon Nanotube
Published in Journal of contemporary physics (2021)“…The results of the simulation modeling of single-stranded DNA adsorption on the surface of a single-walled carbon nanotube performed by the molecular dynamics…”
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4
Description of Helix-Coil Transition in Heteropolymers in Frame of GMPC
Published in Journal of contemporary physics (01-10-2021)“…The work is devoted to the study of the behavior of heterogeneous biopolymers during the melting of the secondary structure. A random bimodal biopolymer is…”
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5
Differential Melting Curves in Heterogeneous Biopolymers
Published in Journal of contemporary physics (01-07-2020)“…The paper considers the order-disorder transition in a sequence of two varieties of repeating units. It is shown that the reduced free energy converges to the…”
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6
The helix-coil transition in heterogeneous double stranded DNA: microcanonical method
Published in The Journal of chemical physics (15-11-2005)“…A microscopic Potts-like one-dimensional model with many-particle interactions is developed to construct a statistical mechanical description of the melting of…”
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7
The Conductivity of the Monolayer of DNA — Quantum Dot Complexes in the Presence of Intercalating Charged Ligands
Published in Journal of contemporary physics (2020)“…The resistance of a monolayer of complexes of the double-stranded DNA with quantum dots were computed. It was shown that with the non-competitive DNA…”
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8
Sensitivity of DNA Sensors in the Presence of Charged Ligands
Published in Journal of contemporary physics (01-04-2018)“…Factors that influence both the thermodynamics of hybridization and the stability of the DNA–DNA duplexes are analyzed. The noncompetitive DNA hybridization…”
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9
Microscopical approach to the helix–coil transition in DNA
Published in Physica A (15-06-2000)“…A model Hamiltonian for double-strand polynucleotides is suggested to describe the phenomenon of helix–coil transition. The Hamiltonian is constructed using…”
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10
Effect of ligands binding on the isotherm of hybridization of the DNA-chip
Published in Journal of contemporary physics (01-04-2017)“…The factors are analyzed, which influence both the hybridization thermodynamics and the DNA/DNA-duplex stability. The non-competitive hybridization of the DNA…”
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11
Intersegment interactions and helix-coil transition within the generalized model of polypeptide chains approach
Published in The Journal of chemical physics (21-09-2009)“…The generalized model of polypeptide chains is extended to describe the helix-coil transition in a system comprised of two chains interacting side-by-side. The…”
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12
Two scale generalized model of polypeptide chains
Published in The Journal of chemical physics (21-05-2008)“…The generalized model of polypeptide chains (GMPC) is expanded to simultaneously consider two types of interactions occurring over different scales. This new…”
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13
Stacking heterogeneity: a model for the sequence dependent melting cooperativity of duplex DNA
Published in The Journal of chemical physics (28-04-2007)“…A microscopic Potts-like one-dimensional model with many particle interactions [referred as the generalized model of polypeptide chains (GMPCs)] is developed…”
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14
Microscopic formulation of the Zimm-Bragg model for the helix-coil transition
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-02-2010)“…A microscopic spin model is proposed for the phenomenological Zimm-Bragg model for the helix-coil transition in biopolymers. This model is shown to provide the…”
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15
Competition for hydrogen-bond formation in the helix-coil transition and protein folding
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-05-2011)“…The problem of the helix-coil transition of biopolymers in explicit solvents, such as water, with the ability for hydrogen bonding with a solvent is addressed…”
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16
RNA folding in the presence of counterions
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-06-2007)“…We present a general thermodynamic picture of the folding of RNA-like heteropolymer based on the basic physical principles. The Hamiltonian of the model…”
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17
The helix-coil transition in polypeptides: a microscopic approach. II
Published in Biopolymers (01-01-1995)“…In the framework of an earlier constructed model [N.S. Ananikyan et al. (1990) Biopolymers, Vol. 30, pp. 357-367], some analytical estimates for the…”
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18
Competition for hydrogen-bond formation in the helix-coil transition and protein folding
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (02-05-2011)Get full text
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19
Hydrostatic pressure influence on static dielectric permeability of polymers
Published in Journal of polymer science. Part B, Polymer physics (01-10-1998)“…The generality of baric changes in static dielectric permeability of polymers for different temperatures of the sample is considered in the present work. It is…”
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20
Order-disorder transition in one-dimensional system with disorder in composition
Published in Physics of atomic nuclei (01-11-2005)“…The influence of structural inhomogeneity onto order-disorder transitions in 1D systems is considered in the scope of the Potts-like model with many-particle…”
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