Search Results - "Mori, Jiro F."

Multispecies Diesel Fuel Biodegradation and Niche Formation Are Ignited by Pioneer Hydrocarbon-Utilizing Proteobacteria in a Soil Bacterial Consortium by Mori, Jiro F, Kanaly, Robert A

“…A soil bacterial consortium that was grown on diesel fuel and consisted of more than 10 members from different genera was maintained through repetitive…”
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Nondesulfurizing benzothiophene biotransformation to hetero and homodimeric ortho-substituted diaryl disulfides by the model PAH-degrading Sphingobium barthaii by Nemoto, Yuki, Ozawa, Kohei, Mori, Jiro F., Kanaly, Robert A.

“…Understanding the biotransformation mechanisms of toxic sulfur-containing polycyclic aromatic hydrocarbon (PASH) pollutants such as benzothiophene (BT) is…”
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Formation of Biogenic Manganese Oxide Nodules on Hyphae of a New Fungal Isolate of Periconia That Immobilizes Aqueous Copper by Tsushima, Shihori, Nishi, Yuma, Suzuki, Ryo, Tachibana, Masaru, Kanaly, Robert A., Mori, Jiro F.

“…Mn(II)-oxidizing microorganisms are considered to play significant roles in the natural geochemical cycles of Mn and other heavy metals because the insoluble…”
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Natural Chromosome-Chromid Fusion across rRNA Operons in a Burkholderiaceae Bacterium by Mori, Jiro F, Kanaly, Robert A

“…Chromids (secondary chromosomes) in bacterial genomes that are present in addition to the main chromosome appear to be evolutionarily conserved in some…”
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Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov., sp. nov by Mori, Jiro F, Scott, Jarrod J, Hager, Kevin W, Moyer, Craig L, Küsel, Kirsten, Emerson, David

“…Chemosynthetic Fe-oxidizing communities are common at diffuse-flow hydrothermal vents throughout the world’s oceans. The foundational members of these…”
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Putative Mixotrophic Nitrifying-Denitrifying Gammaproteobacteria Implicated in Nitrogen Cycling Within the Ammonia/Oxygen Transition Zone of an Oil Sands Pit Lake by Mori, Jiro F., Chen, Lin-Xing, Jessen, Gerdhard L., Rudderham, Sarah B., McBeth, Joyce M., Lindsay, Matthew B. J., Slater, Gregory F., Banfield, Jillian F., Warren, Lesley A.

“…Anthropogenically-impacted environments offer the opportunity to discover novel microbial species and metabolisms, which may be undetectable in natural…”
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Sticking together: inter-species aggregation of bacteria isolated from iron snow is controlled by chemical signaling by Mori, Jiro F, Ueberschaar, Nico, Lu, Shipeng, Cooper, Rebecca E, Pohnert, Georg, Küsel, Kirsten

“…Marine and lake snow is a continuous shower of mixed organic and inorganic aggregates falling from the upper water where primary production is substantial…”
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Comprehensive Genomic Characterization of Marine Bacteria Thalassospira spp. Provides Insights into Their Ecological Roles in Aromatic Hydrocarbon-Exposed Environments by Kayama, Go, Kanaly, Robert A, Mori, Jiro F

“…The marine bacterial genus has often been identified as an abundant member of polycyclic aromatic hydrocarbon (PAH)-exposed microbial communities. However,…”
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The Potential Role of Halothiobacillus spp. in Sulfur Oxidation and Acid Generation in Circum-Neutral Mine Tailings Reservoirs by Whaley-Martin, Kelly, Jessen, Gerdhard L, Nelson, Tara Colenbrander, Mori, Jiro F, Apte, Simon, Jarolimek, Chad, Warren, Lesley A

“…The biogeochemistry of acid mine drainage (AMD) derived from waste rock associated sulfide mineral oxidation is relatively well-characterized and linked to…”
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Complete Genome Sequence of Sphingobium barthaii KK22, a High-Molecular-Weight Polycyclic Aromatic Hydrocarbon-Degrading Soil Bacterium by Mori, Jiro F, Kanaly, Robert A

“…KK22 is a high-molecular-weight polycyclic aromatic hydrocarbon-degrading soil bacterium that has been investigated in biotransformation, microbial ecology,…”
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Alum Addition Triggers Hypoxia in an Engineered Pit Lake by Jessen, Gerdhard L, Chen, Lin-Xing, Mori, Jiro F, Nelson, Tara E Colenbrander, Slater, Gregory F, Lindsay, Matthew B J, Banfield, Jillian F, Warren, Lesley A

“…Here, we examine the geobiological response to a whole-lake alum (aluminum sulfate) treatment (2016) of Base Mine Lake (BML), the first pilot-scale pit lake…”
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Assessment of bacterial biotransformation of alkylnaphthalene lubricating base oil component 1-butylnaphthalene by LC/ESI-MS(/MS) by Sakai, Miharu, Mori, Jiro F., Kanaly, Robert A.

“…Alkylnaphthalene lubricating oils are synthetic Group V base oils that are utilized in wide-ranging industrial applications and which are composed of polyalkyl…”
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Wide Distribution of Phage That Infect Freshwater SAR11 Bacteria by Chen, Lin-Xing, Zhao, Yanlin, McMahon, Katherine D., Mori, Jiro F., Jessen, Gerdhard L., Nelson, Tara Colenbrander, Warren, Lesley A., Banfield, Jillian F.

“…Fonsibacter represents a significant microbial group of freshwater ecosystems. Although the genomic and metabolic features of these bacteria have been well…”
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Growth of Sphingobium barthaii KK22 on 1-ethylnaphthalene reveals diverse oxidative transformations and a complex metabolite profile by Sakai, Miharu, Tomiyama, Yuna, Mori, Jiro F., Kanaly, Robert A.

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Genomic analysis of a marine alphaproteobacterium Sagittula sp. strain MA-2 that carried eight plasmids by Abe, Mayuko, Kanaly, Robert A., Mori, Jiro F.

“…Bacteria that belong to the family Roseobacteraceae in the Alphaproteobacteria class are widely distributed in marine environments with remarkable…”
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Chemical and genomic analyses of polycyclic aromatic hydrocarbon biodegradation in Sphingobium barthaii KK22 reveals divergent pathways in soil sphingomonads by Maeda, Allyn H., Nishi, Shinro, Hatada, Yuji, Ohta, Yukari, Misaka, Kanna, Kunihiro, Marie, Mori, Jiro F., Kanaly, Robert A.

“…Polycyclic aromatic hydrocarbons (PAHs) are hazardous pollutants that are biodegraded by soil bacteria and the soil sphingomonads are thought to be major…”
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Whole-genome sequence of Periconia sp. strain TS-2, an ascomycete fungus isolated from a freshwater outflow and capable of Mn(II) oxidation by Tsushima, Shihori, Kanaly, Robert A, Mori, Jiro F

“…Members of the genus are commonly found as plant-associated filamentous fungi. Here, the first draft genome sequence of a new strain, TS-2, that was isolated…”
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Complete Genome Sequence of Thalassospira sp. Strain GO-4, a Marine Bacterium Isolated from a Phenanthrene-Enriched Bacterial Consortium by Kayama, Go, Kanaly, Robert A., Mori, Jiro F.

“…The genus Thalassospira has often been studied as a potential major contributing member of aromatic hydrocarbon-exposed microbial communities. Here, the…”
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Cometabolic benzo[a]pyrene biotransformation by Sphingobium barthaii KK22 proceeds through the kata-annelated ring and 1-pyrenecarboxylic acid to downstream products by Izawa, Minami, Sakai, Miharu, Mori, Jiro F., Kanaly, Robert A.

“…•Benzo[a]pyrene was biotransformed by a soil sphingomonad through cometabolism.•New benzo[a]pyrene biotransformation products were identified by…”
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Complete Genome Sequence of Cupriavidus necator KK10, an Azaarene-Degrading and Polyhydroxyalkanoate-Producing Soil Bacterium by Mori, Jiro F, Nagai, Miho, Kanaly, Robert A

“…Cupriavidus necator KK10 has been investigated in azaarene and diesel fuel biodegradation studies and is capable of polyhydroxyalkanoate (PHA) production. Its…”
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