Search Results - "Moniz, Katya"

An omics-based framework for assessing the health risk of antimicrobial resistance genes by Zhang, An-Ni, Gaston, Jeffry M., Dai, Chengzhen L., Zhao, Shijie, Poyet, Mathilde, Groussin, Mathieu, Yin, Xiaole, Li, Li-Guan, van Loosdrecht, Mark C. M., Topp, Edward, Gillings, Michael R., Hanage, William P., Tiedje, James M., Moniz, Katya, Alm, Eric J., Zhang, Tong

“…Antibiotic resistance genes (ARGs) are widespread among bacteria. However, not all ARGs pose serious threats to public health, highlighting the importance of…”
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SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases by Wu, Fuqing, Zhang, Jianbo, Xiao, Amy, Gu, Xiaoqiong, Lee, Wei Lin, Armas, Federica, Kauffman, Kathryn, Hanage, William, Matus, Mariana, Ghaeli, Newsha, Endo, Noriko, Duvallet, Claire, Poyet, Mathilde, Moniz, Katya, Washburne, Alex D., Erickson, Timothy B., Chai, Peter R., Thompson, Janelle, Alm, Eric J.

“…Wastewater-based surveillance is a promising approach for proactive outbreak monitoring. SARS-CoV-2 is shed in stool early in the clinical course and infects a…”
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Culturing the marine cyanobacterium Prochlorococcus by Moore, Lisa R., Coe, Allison, Zinser, Erik R., Saito, Mak A., Sullivan, Matthew B., Lindell, Debbie, Frois‐Moniz, Katya, Waterbury, John, Chisholm, Sallie W.

“…Prochlorococcus is the numerically dominant primary producer in open ocean ecosystems. Analysis of Prochlorococcus genome sequences from cultured isolates and…”
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MicrobiomeCensus estimates human population sizes from wastewater samples based on inter-individual variability in gut microbiomes by Zhang, Lin, Chen, Likai, Yu, Xiaoqian Annie, Duvallet, Claire, Isazadeh, Siavash, Dai, Chengzhen, Park, Shinkyu, Frois-Moniz, Katya, Duarte, Fabio, Ratti, Carlo, Alm, Eric J, Ling, Fangqiong

“…The metagenome embedded in urban sewage is an attractive new data source to understand urban ecology and assess human health status at scales beyond a single…”
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SARS-CoV-2 RNA concentrations in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases by Wu, Fuqing, Xiao, Amy, Zhang, Jianbo, Moniz, Katya, Endo, Noriko, Armas, Federica, Bonneau, Richard, Brown, Megan A., Bushman, Mary, Chai, Peter R., Duvallet, Claire, Erickson, Timothy B., Foppe, Katelyn, Ghaeli, Newsha, Gu, Xiaoqiong, Hanage, William P., Huang, Katherine H., Lee, Wei Lin, Matus, Mariana, McElroy, Kyle A., Nagler, Jonathan, Rhode, Steven F., Santillana, Mauricio, Tucker, Joshua A., Wuertz, Stefan, Zhao, Shijie, Thompson, Janelle, Alm, Eric J.

“…Current estimates of COVID-19 prevalence are largely based on symptomatic, clinically diagnosed cases. The existence of a large number of undiagnosed…”
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Wastewater surveillance of SARS-CoV-2 across 40 U.S. states from February to June 2020 by Wu, Fuqing, Xiao, Amy, Zhang, Jianbo, Moniz, Katya, Endo, Noriko, Armas, Federica, Bushman, Mary, Chai, Peter R., Duvallet, Claire, Erickson, Timothy B., Foppe, Katelyn, Ghaeli, Newsha, Gu, Xiaoqiong, Hanage, William P., Huang, Katherine H., Lee, Wei Lin, McElroy, Kyle A., Rhode, Steven F., Matus, Mariana, Wuertz, Stefan, Thompson, Janelle, Alm, Eric J.

“…•Wastewater viral titers precede clinical COVID-19 surveillance data across the U.S.•SARS-CoV-2 detection rate in wastewater is 80% when incidence is 13 per…”
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Metrics to relate COVID-19 wastewater data to clinical testing dynamics by Xiao, Amy, Wu, Fuqing, Bushman, Mary, Zhang, Jianbo, Imakaev, Maxim, Chai, Peter R, Duvallet, Claire, Endo, Noriko, Erickson, Timothy B, Armas, Federica, Arnold, Brian, Chen, Hongjie, Chandra, Franciscus, Ghaeli, Newsha, Gu, Xiaoqiong, Hanage, William P, Lee, Wei Lin, Matus, Mariana, McElroy, Kyle A, Moniz, Katya, Rhode, Steven F, Thompson, Janelle, Alm, Eric J

“…•We introduce three metrics to relate SARS-CoV-2 wastewater data to clinical case data.•These metrics can help evaluate public health responses such as testing…”
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Elevated rates of horizontal gene transfer in the industrialized human microbiome by Groussin, Mathieu, Poyet, Mathilde, Sistiaga, Ainara, Kearney, Sean M., Moniz, Katya, Noel, Mary, Hooker, Jeff, Gibbons, Sean M., Segurel, Laure, Froment, Alain, Mohamed, Rihlat Said, Fezeu, Alain, Juimo, Vanessa A., Lafosse, Sophie, Tabe, Francis E., Girard, Catherine, Iqaluk, Deborah, Nguyen, Le Thanh Tu, Shapiro, B. Jesse, Lehtimäki, Jenni, Ruokolainen, Lasse, Kettunen, Pinja P., Vatanen, Tommi, Sigwazi, Shani, Mabulla, Audax, Domínguez-Rodrigo, Manuel, Nartey, Yvonne A., Agyei-Nkansah, Adwoa, Duah, Amoako, Awuku, Yaw A., Valles, Kenneth A., Asibey, Shadrack O., Afihene, Mary Y., Roberts, Lewis R., Plymoth, Amelie, Onyekwere, Charles A., Summons, Roger E., Xavier, Ramnik J., Alm, Eric J.

“…Industrialization has impacted the human gut ecosystem, resulting in altered microbiome composition and diversity. Whether bacterial genomes may also adapt to…”
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Quantitative SARS-CoV‑2 Alpha Variant B.1.1.7 Tracking in Wastewater by Allele-Specific RT-qPCR by Lee, Wei Lin, Imakaev, Maxim, Armas, Federica, McElroy, Kyle A, Gu, Xiaoqiong, Duvallet, Claire, Chandra, Franciscus, Chen, Hongjie, Leifels, Mats, Mendola, Samuel, Floyd-O’Sullivan, Róisín, Powell, Morgan M, Wilson, Shane T, Berge, Karl L. J, Lim, Claire Y. J, Wu, Fuqing, Xiao, Amy, Moniz, Katya, Ghaeli, Newsha, Matus, Mariana, Thompson, Janelle, Alm, Eric J

“…The critical need for surveillance of SARS-CoV-2 variants of concern has prompted the development of methods that can track variants in wastewater. Here, we…”
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