Search Results - "Michael, W. Matthew"
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Characterization of factors that underlie transcriptional silencing in C. elegans oocytes
Published in PLoS genetics (21-07-2023)“…While it has been appreciated for decades that prophase-arrested oocytes are transcriptionally silenced on a global level, the molecular pathways that promote…”
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MRN-dependent and independent pathways for recruitment of TOPBP1 to DNA double-strand breaks
Published in PloS one (02-08-2022)“…A taxia T elangiectasia mutated and R AD3-related (ATR) kinase is activated by DNA replication stress and also by various forms of DNA damage, including DNA…”
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Direct Binding to Replication Protein A (RPA)-coated Single-stranded DNA Allows Recruitment of the ATR Activator TopBP1 to Sites of DNA Damage
Published in The Journal of biological chemistry (17-06-2016)“…A critical event for the ability of cells to tolerate DNA damage and replication stress is activation of the ATR kinase. ATR activation is dependent on the…”
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Structure-function analysis of TOPBP1’s role in ATR signaling using the DSB-mediated ATR activation in Xenopus egg extracts (DMAX) system
Published in Scientific reports (11-01-2021)“…The protein kinase ATR is activated at sites of DNA double-strand breaks where it plays important roles in promoting DNA end resection and regulating cell…”
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Zygotic Genome Activation Triggers Chromosome Damage and Checkpoint Signaling in C. elegans Primordial Germ Cells
Published in Developmental cell (06-07-2015)“…Recent findings have identified highly transcribed genes as a source of genome instability; however, the degree to which large-scale shifts in transcriptional…”
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Cell-Type Specific Responses to DNA Replication Stress in Early C. elegans Embryos
Published in PloS one (11-10-2016)“…To better understand how the cellular response to DNA replication stress is regulated during embryonic development, we and others have established the early C…”
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TopBP1 and DNA polymerase alpha-mediated recruitment of the 9-1-1 complex to stalled replication forks: Implications for a replication restart-based mechanism for ATR checkpoint activation
Published in Cell cycle (Georgetown, Tex.) (15-09-2009)“…Upon sensing DNA damage or replication stress, cells trigger checkpoint response pathways that control cell cycle progression and maintain genomic stability. A…”
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Continued primer synthesis at stalled replication forks contributes to checkpoint activation
Published in The Journal of cell biology (19-04-2010)“…Stalled replication forks activate and are stabilized by the ATR (ataxia-telangiectasia mutated and Rad3 related)-mediated checkpoint, but ultimately, they…”
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Ubiquitin/SUMO modification of PCNA promotes replication fork progression in Xenopus laevis egg extracts
Published in The Journal of cell biology (19-12-2005)“…The homotrimeric DNA replication protein proliferating cell nuclear antigen (PCNA) is regulated by both ubiquitylation and sumoylation. We study the appearance…”
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10
Checkpoint silencing during the DNA damage response in Caenorhabditis elegans embryos
Published in The Journal of cell biology (27-03-2006)“…In most cells, the DNA damage checkpoint delays cell division when replication is stalled by DNA damage. In early Caenorhabditis elegans embryos, however, the…”
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A global chromatin compaction pathway that represses germline gene expression during starvation
Published in The Journal of cell biology (06-09-2021)“…While much is known about how transcription is controlled at individual genes, comparatively little is known about how cells regulate gene expression on a…”
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The Xenopus Xmus101 Protein Is Required for the Recruitment of Cdc45 to Origins of DNA Replication
Published in The Journal of cell biology (25-11-2002)“…The initiation of eukaryotic DNA replication involves origin recruitment and activation of the MCM2-7 complex, the putative replicative helicase…”
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13
NBS1 binds directly to TOPBP1 via disparate interactions between the NBS1 BRCT1 domain and the TOPBP1 BRCT1 and BRCT2 domains
Published in DNA repair (01-03-2023)“…The TOPBP1 and NBS1 proteins are key components of DNA repair and DNA-based signaling systems. TOPBP1 is a multi-BRCT domain containing protein that plays…”
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14
Activation of the DNA Replication Checkpoint through RNA Synthesis by Primase
Published in Science (American Association for the Advancement of Science) (22-09-2000)“…When DNA replication is inhibited during the synthesis (S) phase of the cell cycle, a signaling pathway (checkpoint) is activated that serves to prevent…”
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15
Cyclin CYB-3 controls both S-phase and mitosis and is asymmetrically distributed in the early C. elegans embryo
Published in Development (Cambridge) (01-09-2016)“…In early C. elegans embryos the timing of cell division is both invariant and developmentally regulated, yet how the cell cycle is controlled in the embryo and…”
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Delineation of a minimal topoisomerase II binding protein 1 for regulated activation of ATR at DNA double-strand breaks
Published in The Journal of biological chemistry (01-07-2022)“…Topoisomerase II Binding Protein 1 (TOPBP1) is an important activator of the DNA damage response kinase Ataxia Telangiectasia and Rad3-related (ATR), although…”
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The topoisomerase II/condensin II axis silences transcription during germline specification in Caenorhabditis elegans
Published in G3 : genes - genomes - genetics (30-10-2024)“…Abstract In Caenorhabditis elegans, the germline is specified via a preformation mechanism that relies on the PIE-1 protein's ability to globally silence mRNA…”
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TopBP1 and DNA polymerase-α directly recruit the 9-1-1 complex to stalled DNA replication forks
Published in The Journal of cell biology (23-03-2009)“…TopBP1 and the Rad9-Rad1-Hus1 (9-1-1) complex activate the ataxia telangiectasia mutated and Rad3-related (ATR) protein kinase at stalled replication forks…”
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Biochemical analysis of TOPBP1 oligomerization
Published in DNA repair (01-12-2020)“…•The ATR activator TOPBP1 oligomerizes via BRCT-BRCT domain interactions.•TOPBP1 oligomers can still bind heterologous binding partners.•The TOPBP1 AAD…”
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Transcriptional repression during spermatogenesis in C. elegans requires TOP-2, condensin II, and the MET-2 H3K9 methyltransferase
Published in microPublication biology (2023)“…In RNA polymerase II (RNAPII) transcription is globally repressed as oocytes prepare for meiosis. Recent work has identified the transcriptional repressors…”
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