Search Results - "Miao, Chenyong"

High-throughput analysis of leaf physiological and chemical traits with VIS-NIR-SWIR spectroscopy: a case study with a maize diversity panel by Ge, Yufeng, Atefi, Abbas, Zhang, Huichun, Miao, Chenyong, Ramamurthy, Raghuprakash Kastoori, Sigmon, Brandi, Yang, Jinliang, Schnable, James C

“…Hyperspectral reflectance data in the visible, near infrared and shortwave infrared range (VIS-NIR-SWIR, 400-2500 nm) are commonly used to nondestructively…”
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PacBio Sequencing Reveals Transposable Elements as a Key Contributor to Genomic Plasticity and Virulence Variation in Magnaporthe oryzae by Bao, Jiandong, Chen, Meilian, Zhong, Zhenhui, Tang, Wei, Lin, Lianyu, Zhang, Xingtan, Jiang, Haolang, Zhang, Deyu, Miao, Chenyong, Tang, Haibao, Zhang, Jisen, Lu, Guodong, Ming, Ray, Norvienyeku, Justice, Wang, Baohua, Wang, Zonghua

“…Dear Editor ： The sustainable cultivation of rice, which serves as staple food crop for more than half of the world＇s population, is under serious threat due…”
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Influence of Sediment Dredging on the Distribution of Chlorinated Paraffin by Yang, Tao, Deng, Bangping, Miao, Chenyong

“…To study the influence of dredged sediment transportation on the distribution of short-chain chlorinated paraffins (SCCPs, C10-13), medium-chain chlorinated…”
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Genotype-Corrector: improved genotype calls for genetic mapping in F2 and RIL populations by Miao, Chenyong, Fang, Jingping, Li, Delin, Liang, Pingping, Zhang, Xingtan, Yang, Jinliang, Schnable, James C., Tang, Haibao

“…F 2 and recombinant inbred lines (RILs) populations are very commonly used in plant genetic mapping studies. Although genome-wide genetic markers like single…”
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Voxel carving‐based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency by Gaillard, Mathieu, Miao, Chenyong, Schnable, James C., Benes, Bedrich

“…Changes in canopy architecture traits have been shown to contribute to yield increases. Optimizing both light interception and light interception efficiency of…”
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Semantic Segmentation of Sorghum Using Hyperspectral Data Identifies Genetic Associations by Miao, Chenyong, Pages, Alejandro, Xu, Zheng, Rodene, Eric, Yang, Jinliang, Schnable, James C

“…This study describes the evaluation of a range of approaches to semantic segmentation of hyperspectral images of sorghum plants, classifying each pixel as…”
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3D reconstruction identifies loci linked to variation in angle of individual sorghum leaves by Tross, Michael C, Gaillard, Mathieu, Zwiener, Mackenzie, Miao, Chenyong, Grove, Ryleigh J, Li, Bosheng, Benes, Bedrich, Schnable, James C

“…Selection for yield at high planting density has reshaped the leaf canopy of maize, improving photosynthetic productivity in high density settings. Further…”
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Automation of leaf counting in maize and sorghum using deep learning by Miao, Chenyong, Guo, Alice, Thompson, Addie M., Yang, Jinliang, Ge, Yufeng, Schnable, James C.

“…Leaf number and leaf emergence rate are phenotypes of interest to plant breeders, plant geneticists, and crop modelers. Counting the extant leaves of an…”
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Optimising the identification of causal variants across varying genetic architectures in crops by Miao, Chenyong, Yang, Jinliang, Schnable, James C.

“…Summary Association studies use statistical links between genetic markers and the phenotype variation across many individuals to identify genes controlling…”
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Carbonate Radical Oxidation of Cylindrospermopsin (Cyanotoxin): Kinetic Studies and Mechanistic Consideration by Hao, Zhenyu, Ma, Jianzhong, Miao, Chenyong, Song, Yue, Lian, Lushi, Yan, Shuwen, Song, Weihua

“…Cylindrospermopsin (CYN) is one of the most important cyanobacterial toxins frequently found in surface waters. We reported the detailed kinetics and pathways…”
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ALLMAPS: robust scaffold ordering based on multiple maps by Tang, Haibao, Zhang, Xingtan, Miao, Chenyong, Zhang, Jisen, Ming, Ray, Schnable, James C, Schnable, Patrick S, Lyons, Eric, Lu, Jianguo

“…The ordering and orientation of genomic scaffolds to reconstruct chromosomes is an essential step during de novo genome assembly. Because this process utilizes…”
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Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum by Miao, Chenyong, Xu, Yuhang, Liu, Sanzhen, Schnable, Patrick S, Schnable, James C

“…The phenotypes of plants develop over time and change in response to the environment. New engineering and computer vision technologies track these phenotypic…”
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Reevaluation of the contributions of reactive intermediates to the photochemical transformation of 17β-estradiol in sewage effluent by Lian, Lushi, Miao, Chenyong, Hao, Zhenyu, Liu, Qian, Liu, Yingjie, Song, Weihua, Yan, Shuwen

“…•The reaction rate constants of PPRIs with E2 were measured at various pH.•EfOM can act as a photosensitizer and an inhibitor in the phototransformation of…”
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Genome-Wide Characterization of DNase I-Hypersensitive Sites and Cold Response Regulatory Landscapes in Grasses by Han, Jinlei, Wang, Pengxi, Wang, Qiongli, Lin, Qingfang, Chen, Zhiyong, Yu, Guangrun, Miao, Chenyong, Dao, Yihang, Wu, Ruoxi, Schnable, James C, Tang, Haibao, Wang, Kai

“…Deep sequencing of DNase-I treated chromatin (DNase-seq) can be used to identify DNase I-hypersensitive sites (DHSs) and facilitates genome-scale mining of de…”
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Shared Genetic Control of Root System Architecture between Zea mays and Sorghum bicolor by Zheng, Zihao, Hey, Stefan, Jubery, Talukder, Liu, Huyu, Yang, Yu, Coffey, Lisa, Miao, Chenyong, Sigmon, Brandi, Schnable, James C, Hochholdinger, Frank, Ganapathysubramanian, Baskar, Schnable, Patrick S

“…Determining the genetic control of root system architecture (RSA) in plants via large-scale genome-wide association study (GWAS) requires high-throughput…”
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The pineapple genome and the evolution of CAM photosynthesis by Ming, Ray, VanBuren, Robert, Wai, Ching Man, Tang, Haibao, Schatz, Michael C, Bowers, John E, Lyons, Eric, Wang, Ming-Li, Chen, Jung, Biggers, Eric, Zhang, Jisen, Huang, Lixian, Zhang, Lingmao, Miao, Wenjing, Zhang, Jian, Ye, Zhangyao, Miao, Chenyong, Lin, Zhicong, Wang, Hao, Zhou, Hongye, Yim, Won C, Priest, Henry D, Zheng, Chunfang, Woodhouse, Margaret, Edger, Patrick P, Guyot, Romain, Guo, Hao-Bo, Guo, Hong, Zheng, Guangyong, Singh, Ratnesh, Sharma, Anupma, Min, Xiangjia, Zheng, Yun, Lee, Hayan, Gurtowski, James, Sedlazeck, Fritz J, Harkess, Alex, McKain, Michael R, Liao, Zhenyang, Fang, Jingping, Liu, Juan, Zhang, Xiaodan, Zhang, Qing, Hu, Weichang, Qin, Yuan, Wang, Kai, Chen, Li-Yu, Shirley, Neil, Lin, Yann-Rong, Liu, Li-Yu, Hernandez, Alvaro G, Wright, Chris L, Bulone, Vincent, Tuskan, Gerald A, Heath, Katy, Zee, Francis, Moore, Paul H, Sunkar, Ramanjulu, Leebens-Mack, James H, Mockler, Todd, Bennetzen, Jeffrey L, Freeling, Michael, Sankoff, David, Paterson, Andrew H, Zhu, Xinguang, Yang, Xiaohan, Smith, J Andrew C, Cushman, John C, Paull, Robert E, Yu, Qingyi

“…Ray Ming, Robert Paull, Qingyi Yu and colleagues report the genome sequences of two cultivated pineapple varieties and one wild pineapple relative. Their…”
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Increased Power and Accuracy of Causal Locus Identification in Time Series Genome-wide Association in Sorghum1[OPEN] by Miao, Chenyong, Xu, Yuhang, Liu, Sanzhen, Schnable, Patrick S., Schnable, James C.

“…Applying functional principal component analyses to time series genome-wide association studies increases the power and accuracy of gene identification in a…”
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Recent polyploidization events in three Saccharum founding species by Zhang, Jisen, Zhang, Qing, Li, Leiting, Tang, Haibao, Zhang, Qiong, Chen, Yang, Arrow, Jie, Zhang, Xingtan, Wang, Aiqin, Miao, Chenyong, Ming, Ray

“…Summary The complexity of polyploid Saccharum genomes hindered progress of genome research and crop improvement in sugarcane. To understand their genome…”
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Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum by Mural, Ravi V, Grzybowski, Marcin, Miao, Chenyong, Damke, Alyssa, Sapkota, Sirjan, Boyles, Richard E, Salas Fernandez, Maria G, Schnable, Patrick S, Sigmon, Brandi, Kresovich, Stephen, Schnable, James C

“…Abstract Community association populations are composed of phenotypically and genetically diverse accessions. Once these populations are genotyped, the…”
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Quantitative Genetics and Phonemics in Crops Using Statistical and Machine Learning Approaches by Miao, Chenyong

“…Plant biologists seek to meet the growing food demands in the world by developing high yielding and more resilient crop varieties. Advances in both…”
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