Search Results - "Mesny, Fantin"

A simple guide to de novo transcriptome assembly and annotation by Raghavan, Venket, Kraft, Louis, Mesny, Fantin, Rigerte, Linda

“…Abstract A transcriptome constructed from short-read RNA sequencing (RNA-seq) is an easily attainable proxy catalog of protein-coding genes when genome…”
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Co‐evolution within the plant holobiont drives host performance by Mesny, Fantin, Hacquard, Stéphane, Thomma, Bart PHJ

“…Plants interact with a diversity of microorganisms that influence their growth and resilience, and they can therefore be considered as ecological entities,…”
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Genetic determinants of endophytism in the Arabidopsis root mycobiome by Mesny, Fantin, Miyauchi, Shingo, Thiergart, Thorsten, Pickel, Brigitte, Atanasova, Lea, Karlsson, Magnus, Hüttel, Bruno, Barry, Kerrie W., Haridas, Sajeet, Chen, Cindy, Bauer, Diane, Andreopoulos, William, Pangilinan, Jasmyn, LaButti, Kurt, Riley, Robert, Lipzen, Anna, Clum, Alicia, Drula, Elodie, Henrissat, Bernard, Kohler, Annegret, Grigoriev, Igor V., Martin, Francis M., Hacquard, Stéphane

“…The roots of Arabidopsis thaliana host diverse fungal communities that affect plant health and disease states. Here, we sequence the genomes of 41 fungal…”
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A microbiota–root–shoot circuit favours Arabidopsis growth over defence under suboptimal light by Hou, Shiji, Thiergart, Thorsten, Vannier, Nathan, Mesny, Fantin, Ziegler, Jörg, Pickel, Brigitte, Hacquard, Stéphane

“…Bidirectional root–shoot signalling is probably key in orchestrating stress responses and ensuring plant survival. Here, we show that Arabidopsis thaliana…”
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Genome-resolved metatranscriptomics reveals conserved root colonization determinants in a synthetic microbiota by Vannier, Nathan, Mesny, Fantin, Getzke, Felix, Chesneau, Guillaume, Dethier, Laura, Ordon, Jana, Thiergart, Thorsten, Hacquard, Stéphane

“…The identification of processes activated by specific microbes during microbiota colonization of plant roots has been hampered by technical constraints in…”
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Physiochemical interaction between osmotic stress and a bacterial exometabolite promotes plant disease by Getzke, Felix, Wang, Lei, Chesneau, Guillaume, Böhringer, Nils, Mesny, Fantin, Denissen, Nienke, Wesseler, Hidde, Adisa, Priscilla Tijesuni, Marner, Michael, Schulze-Lefert, Paul, Schäberle, Till F., Hacquard, Stéphane

“…Various microbes isolated from healthy plants are detrimental under laboratory conditions, indicating the existence of molecular mechanisms preventing disease…”
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Meddling with the microbiota: Fungal tricks to infect plant hosts by Mesny, Fantin, Bauer, Martha, Zhu, Jinyi, Thomma, Bart P.H.J.

“…Plants associate with a wealth of microbes, collectively referred to as the plant microbiota, whose composition is determined by host plant genetics, immune…”
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