Search Results - "Mendeville, Matías"

ACE: absolute copy number estimation from low-coverage whole-genome sequencing data by Poell, Jos B, Mendeville, Matias, Sie, Daoud, Brink, Arjen, Brakenhoff, Ruud H, Ylstra, Bauke

“…Chromosomal copy number aberrations can be efficiently detected and quantified using low-coverage whole-genome sequencing, but analysis is hampered by the lack…”
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A bioinformatics perspective on molecular classification of diffuse large B-cell lymphoma by Mendeville, Matias, Janssen, Jurriaan, Kim, Yongsoo, van Dijk, Erik, de Jong, Daphne, Ylstra, Bauke

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Chromosome 20 loss is characteristic of breast implant–associated anaplastic large cell lymphoma by Los-de Vries, G. Tjitske, de Boer, Mintsje, van Dijk, Erik, Stathi, Phylicia, Hijmering, Nathalie J., Roemer, Margaretha G.M., Mendeville, Matias, Miedema, Daniel M., de Boer, Jan Paul, Rakhorst, Hinne A., van Leeuwen, Flora E., van der Hulst, René R.W.J., Ylstra, Bauke, de Jong, Daphne

“…Breast implant–associated anaplastic large cell lymphoma (BIA-ALCL) is a very rare type of T-cell lymphoma that is uniquely caused by a single environmental…”
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Impact of genetic counseling strategy on diagnostic yield and workload for genome-sequencing-based tumor diagnostics by Koster, Roelof, Schipper, Luuk J., Giesbertz, Noor A.A., van Beek, Daphne, Mendeville, Matías, Samsom, Kris G., Rosenberg, Efraim H., Hogervorst, Frans B.L., Roepman, Paul, Boelens, Mirjam C., Bosch, Linda J.W., van den Berg, Jose G., Meijer, Gerrit A., Voest, Emile E., Cuppen, Edwin, Ruijs, Marielle W.G., van Wezel, Tom, van der Kolk, Lizet, Monkhorst, Kim

“…Genome sequencing (GS) enables comprehensive molecular analysis of tumors and identification of hereditary cancer predisposition. According to guidelines,…”
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Benign and malignant tumors in Rubinstein–Taybi syndrome by Boot, Max V., van Belzen, Martine J., Overbeek, Lucy I., Hijmering, Nathalie, Mendeville, Matias, Waisfisz, Quinten, Wesseling, Pieter, Hennekam, Raoul C., de Jong, Daphne

“…Rubinstein–Taybi syndrome (RSTS) is a multiple congenital anomalies syndrome associated with mutations in CREBBP (70%) and EP300 (5–10%). Previous reports have…”
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The path towards consensus genome classification of diffuse large B-cell lymphoma for use in clinical practice by Mendeville, Matias, Roemer, Margaretha G. M., Los-de Vries, G. Tjitske, Chamuleau, Martine E. D., de Jong, Daphne, Ylstra, Bauke

“…Diffuse large B-cell lymphoma (DLBCL) is a widely heterogeneous disease in presentation, treatment response and outcome that results from a broad biological…”
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Prognostic relevance of CD163 and CD8 combined with EZH2 and gain of chromosome 18 in follicular lymphoma: a study by the Lunenburg Lymphoma Biomarker Consortium by Stevens, Wendy B C, Mendeville, Matias, Redd, Robert, Clear, Andrew J, Bladergroen, Reno, Calaminici, Maria, Rosenwald, Andreas, Hoster, Eva, Hiddemann, Wolfgang, Gaulard, Philippe, Xerri, Luc, Salles, Gilles, Klapper, Wolfram, Pfreundschuh, Michael, Jack, Andrew, Gascoyne, Randy D, Natkunam, Yasodha, Advani, Ranjana, Kimby, Eva, Sander, Birgitta, Sehn, Laurie H, Hagenbeek, Anton, Raemaekers, John, Gribben, John, Kersten, Marie José, Ylstra, Bauke, Weller, Edie, de Jong, Daphne

“…In follicular lymphoma, studies addressing the prognostic value of microenvironment-related immunohistochemical markers and tumor cell-related genetic markers…”
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Reproducibility of Gene Expression Signatures in Diffuse Large B-Cell Lymphoma by Plaça, Jessica Rodrigues, Diepstra, Arjan, Los, Tjitske, Mendeville, Matías, Seitz, Annika, Lugtenburg, Pieternella J, Zijlstra, Josée, Lam, King, da Silva, Jr, Wilson Araújo, Ylstra, Bauke, de Jong, Daphne, van den Berg, Anke, Nijland, Marcel

“…Multiple gene expression profiles have been identified in diffuse large B-cell lymphoma (DLBCL). Besides the cell of origin (COO) classifier, no signatures…”
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Aggressive genomic features in clinically indolent primary HHV8-negative effusion-based lymphoma by Mendeville, Matias, Roemer, Margaretha G.M., van den Hout, Mari F.C.M., Los-de Vries, G. Tjitske, Bladergroen, Reno, Stathi, Phylicia, Hijmering, Nathalie J., Rosenwald, Andreas, Ylstra, Bauke, de Jong, Daphne

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Chromosome 20 loss is characteristic of breast implant-associated anaplastic large cell lymphoma by Los-de Vries, G Tjitske, de Boer, Mintsje, van Dijk, Erik, Stathi, Phylicia, Hijmering, Nathalie J, Roemer, Margaretha G M, Mendeville, Matias, Miedema, Daniel M, de Boer, Jan Paul, Rakhorst, Hinne A, van Leeuwen, Flora E, van der Hulst, René R W J, Ylstra, Bauke, de Jong, Daphne

“…Breast implant-associated anaplastic large cell lymphoma (BIA-ALCL) is a very rare type of T-cell lymphoma that is uniquely caused by a single environmental…”
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The Position of MYC Rearrangements in the Genomic Landscape of Diffuse Large B-Cell Lymphoma by Van Dijk, Erik, Janssen, Jurriaan, Mendeville, Matias, Los-De Vries, G. Tjitske, Roemer, Margaretha GM, Stathi, Phylicia, Richter, Julia, Kim, Yong Soo, Klapper, Wolfram, Dührsen, Ulrich, Hüttmann, Andreas, Lugtenburg, P. J, Zijlstra, Josée M., Kersten, Marie Jose, de Jong, Daphne, Chamuleau, Martine E.D., Ylstra, Bauke

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Combining PET Radiomic Features with MYC Gene Rearrangement Results in High Prediction of Outcome in Diffuse Large B-Cell Lymphoma by Eertink, Jakoba J, Zwezerijnen, Gerben J.C, Wiegers, Sanne E, Chamuleau, Martine E.D, Lugtenburg, Pieternella, De Jong, Daphne, Ylstra, Bauke, Mendeville, Matias, Dührsen, Ulrich, Hüttmann, Andreas, Schmitz, Christine, Richter, Julia, Klapper, Wolfram, Hoekstra, Otto S, de Vet, Henrica C.W, Boellaard, Ronald, Zijlstra, Josée M

“…Introduction Genetic abnormalities, such as MYC oncogene rearrangements, contribute to the outcome heterogeneity in diffuse large B-cell lymphoma (DLBCL)…”
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Baseline radiomics features and MYC rearrangement status predict progression in aggressive B-cell lymphoma by Eertink, Jakoba J., Zwezerijnen, Gerben J. C., Wiegers, Sanne E., Pieplenbosch, Simone, Chamuleau, Martine E. D., Lugtenburg, Pieternella J., de Jong, Daphne, Ylstra, Bauke, Mendeville, Matias, Dührsen, Ulrich, Hanoun, Christine, Hüttmann, Andreas, Richter, Julia, Klapper, Wolfram, Jauw, Yvonne W. S., Hoekstra, Otto S., de Vet, Henrica C. W., Boellaard, Ronald, Zijlstra, Josée M.

“…•Baseline radiomics features accurately predict progression in aggressive B-cell lymphoma.•Radiomics features combined with MYC rearrangement status resulted…”
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Genomic and microenvironmental landscape of stage I follicular lymphoma, compared with stage III/IV by Los-de Vries, G Tjitske, Stevens, Wendy B C, van Dijk, Erik, Langois-Jacques, Carole, Clear, Andrew J, Stathi, Phylicia, Roemer, Margaretha G M, Mendeville, Matias, Hijmering, Nathalie J, Sander, Birgitta, Rosenwald, Andreas, Calaminici, Maria, Hoster, Eva, Hiddemann, Wolfgang, Gaulard, Philippe, Salles, Gilles, Horn, Heike, Klapper, Wolfram, Xerri, Luc, Burton, Catherine, Tooze, Reuben M, Smith, Alexandra G, Buske, Christian, Scott, David W, Natkunam, Yasodha, Advani, Ranjana, Sehn, Laurie H, Raemaekers, John, Gribben, John, Kimby, Eva, Kersten, Marie José, Maucort-Boulch, Delphine, Ylstra, Bauke, de Jong, Daphne

“…Although the genomic and immune microenvironmental landscape of follicular lymphoma (FL) has been extensively investigated, little is known about the potential…”
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