Search Results - "McConkey, Brendan J"
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The GRHL2/ZEB Feedback Loop—A Key Axis in the Regulation of EMT in Breast Cancer
Published in Journal of cellular biochemistry (01-09-2017)“…ABSTRACT More than 90% of cancer‐related deaths are caused by metastasis. Epithelial‐to‐Mesenchymal Transition (EMT) causes tumor cell dissemination while the…”
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Pathogen-secreted proteases activate a novel plant immune pathway
Published in Nature (London) (14-05-2015)“…In Arabidopsis thaliana , pathogen-secreted proteases trigger a previously unknown defence response involving heterotrimeric G-protein complexes upstream of a…”
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New insights into 1-aminocyclopropane-1-carboxylate (ACC) deaminase phylogeny, evolution and ecological significance
Published in PloS one (06-06-2014)“…The main objective of this work is the study of the phylogeny, evolution and ecological importance of the enzyme 1-aminocyclopropane-1-carboxylate (ACC)…”
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Combined effects of the plant growth-promoting bacterium Pseudomonas putida UW4 and salinity stress on the Brassica napus proteome
Published in Applied soil ecology : a section of Agriculture, ecosystems & environment (01-10-2012)“…► Bacterial ACC deaminase alleviates salinity stress on plants. ► Proteomic investigations revealed the individual and combined effects of bacterium and…”
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Modular Evolution and the Origins of Symmetry: Reconstruction of a Three-Fold Symmetric Globular Protein
Published in Structure (London) (11-01-2012)“…The high frequency of internal structural symmetry in common protein folds is presumed to reflect their evolutionary origins from the repetition and fusion of…”
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Effects of Bacterial ACC Deaminase on Brassica napus Gene Expression
Published in Molecular plant-microbe interactions (01-05-2012)“…Plants in association with plant growth-promoting rhizobacteria can benefit from lower plant ethylene levels through the action of the bacterial enzyme…”
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7
The evolution of the class A scavenger receptors
Published in BMC evolutionary biology (27-11-2012)“…The class A scavenger receptors are a subclass of a diverse family of proteins defined based on their ability to bind modified lipoproteins. The 5 members of…”
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Apoptosis induction by eIF5A1 involves activation of the intrinsic mitochondrial pathway
Published in Journal of cellular physiology (01-06-2010)“…The regulatory role of eukaryotic translation initiation factor 5A1 (eIF5A1) in apoptosis was examined using HT‐29 and HeLa S3 cells. eIF5A is the only known…”
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Transcriptomic and barrier responses of human airway epithelial cells exposed to cannabis smoke
Published in Physiological reports (01-10-2019)“…Globally, many jurisdictions are legalizing or decriminalizing cannabis, creating a potential public health issue that would benefit from experimental evidence…”
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10
Nuclear Targeting of Methyl-Recycling Enzymes in Arabidopsis thaliana Is Mediated by Specific Protein Interactions
Published in Molecular plant (2012)“…Numerous transmethylation reactions are required for normal plant growth and development. S-adenosylhomocysteine hydrolase (SAHH) and adenosine kinase (ADK)…”
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Importance of solvent accessibility and contact surfaces in modeling side-chain conformations in proteins
Published in Journal of computational chemistry (15-04-2004)“…Contact surface area and chemical properties of atoms are used to concurrently predict conformations of multiple amino acid side chains on a fixed protein…”
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The origin recognition complex protein family
Published in Genome biology (01-01-2009)“…Origin recognition complex (ORC) proteins were first discovered as a six-subunit assemblage in budding yeast that promotes the initiation of DNA replication…”
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Effect of long-acting β-agonists/glucocorticoids on human airway epithelial cell cytokine, transcriptomic and oxidative stress responses to cannabis smoke
Published in ERJ open research (01-01-2020)“…http://bit.ly/2qiSQhH…”
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Horizontal gene transfer contributed to the evolution of extracellular surface structures: the freshwater polyp Hydra is covered by a complex fibrous cuticle containing glycosaminoglycans and proteins of the PPOD and SWT (sweet tooth) families
Published in PloS one (27-12-2012)“…The single-cell layered ectoderm of the fresh water polyp Hydra fulfills the function of an epidermis by protecting the animals from the surrounding medium…”
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Discrimination of Native Protein Structures Using Atom-Atom Contact Scoring
Published in Proceedings of the National Academy of Sciences - PNAS (18-03-2003)“…We introduce a method for discriminating correctly folded proteins from well designed decoy structures using atom-atom and atom-solvent contact surfaces. The…”
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Identification of Bacterial Proteins Mediating the Interactions Between Pseudomonas putida UW4 and Brassica napus (Canola)
Published in Molecular plant-microbe interactions (01-06-2009)“…The influence of canola root exudates on the proteome of Pseudomonas putida UW4 and the mutant strain P. putida UW4/AcdS-, which lacks a functional…”
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Monitoring Microbial Populations and Antibiotic Resistance Gene Enrichment Associated with Arctic Waste Stabilization Ponds
Published in Applied and environmental microbiology (11-03-2021)“…Wastewater management in the Canadian Arctic is challenging due to climate extremes, small population sizes, and lack of conventional infrastructure for…”
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TARDBP mutations in individuals with sporadic and familial amyotrophic lateral sclerosis
Published in Nature genetics (01-05-2008)“…Recently, TDP-43 was identified as a key component of ubiquitinated aggregates in amyotrophic lateral sclerosis (ALS), an adult-onset neurological disorder…”
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Pollux: platform independent error correction of single and mixed genomes
Published in BMC bioinformatics (16-01-2015)“…Second-generation sequencers generate millions of relatively short, but error-prone, reads. These errors make sequence assembly and other downstream projects…”
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Structural models predict a significantly higher binding affinity between the NblA protein of cyanophage Ma-LMM01 and the phycocyanin of Microcystis aeruginosa NIES-298 compared to the host homolog
Published in Virus evolution (26-09-2024)“…Abstract Horizontal gene transfer events between viruses and hosts are widespread across the virosphere. In cyanophage-host systems, such events often involve…”
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