Search Results - "McCloskey J.A"

Dietary selenium affects methylation of the wobble nucleoside in the anticodon of selenocysteine tRNA([Ser]Sec) by Diamond, A M, Choi, I S, Crain, P F, Hashizume, T, Pomerantz, S C, Cruz, R, Steer, C J, Hill, K E, Burk, R F, McCloskey, J A, Hatfield, D L

“…We reported previously that the presence of selenium in culture media of mammalian cells influences both the steady-state levels and distributions of two tRNA…”
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Structure of the archaeal transfer RNA nucleoside G-15 (2-amino-4,7-dihydro- 4-oxo-7-beta-D-ribofuranosyl-1H-pyrrolo[2,3-d]pyrimidine-5-carboximi dam ide (archaeosine)) by Gregson, J.M., Crain, P.F., Edmonds, C.G., Gupta, R., Hashizume, T., Phillipson, D.W., McCloskey, J.A.

“…A number of post-transcriptional modifications in tRNA are phylogenetically characteristic of the bacterial, eukaryal, or archaeal domains, both with respect…”
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Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNAiMet by Ushida, C., Muramatsu, T., Mizushima, H., Ueda, T., Watanabe, K., Stetter, K.O., Crain, P.F., McCloskey, J.A., Kuchino, Y.

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Calculations of isotopic distribution in molecules extensively labeled with heavy isotopes by Yamamoto, H, McCloskey, James A

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Applications of mass spectrometry to the characterization of oligonucleotides and nucleic acids by Crain, Pamela F, McCloskey, James A

“…Mass spectrometry-based techniques continue to undergo active development for applications to nucleic acids, fueled by methods based on electrospray and…”
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A naturally occurring pyrimidodiazepine in Drosophila: chemical and spectral properties and relationship to drosopterin by Jacobson, K. Bruce, Dorsett, Dale, Pfleiderer, W, McCloskey, James A, Sethi, Satinder K, Buchanan, Michelle V, Rubin, Ira B

“…The structure of an intermediate, in drosopterin biosynthesis, as 6-acetylpyrimidodiazepine has been confirmed by high-resolution mass spectra, 13C NMR,…”
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Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: a unique wobble rule in animal mitochondria by Tomita, K, Ueda, T, Ishiwa, S, Crain, P.F, McCloskey, J.A, Watanabe, K

“…Mitochondrial (mt) tRNATrp, tRNAlle, tRNAMet, tRNASerGCU, tRNAAsn and tRNALys were purified from Drosophila melanogaster (fruit fly) and their nucleotide…”
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Mass spectrometry of mRNA cap 4 from trypanosomatids reveals two novel nucleosides by BANGS, J. D, CRAIN, P. F, HASHIZUME, T, MCCLOSKEY, J. A, BOOTHROYD, J. C

“…Synthesis of mRNA in kinetoplastid protozoa involves the process of trans-splicing, in which an identical 39-41-nucleotide (depending on the species) mini-exon…”
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The mechanism of adenosine to inosine conversion by the double-stranded RNA unwinding/modifying activity: a high-performance liquid chromatography-mass spectrometry analysis by Polson, Andrew G, Crain, Pamela F, Pomerantz, Steven C, McCloskey, James A, Bass, Brenda L

“…We have used directly combined high-performance liquid chromatography-mass spectrometry (LC/MS) to examine the mechanism of the reaction catalyzed by the…”
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Implications of a functional large ribosomal RNA with only three modified nucleotides by Sirum-Connolly, K., Peltier, J.M., Crain, P.F., McCloskey, J.A., Mason, T.L.

“…The sequence and structure of the peptidyl transferase region of large subunit ribosomal RNA is highly conserved and specific modified nucleotides could be…”
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RNA modification database by Crain, P.F, McCloskey, J.A

“…The RNA modification database provides a comprehensive listing of post-transcriptionally modified nucleosides from RNA and is maintained as an updated version…”
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Mass spectrometry of mRNA cap 4 from trypanosomatides reveals two novel nucleosides by Bangs J.D, Crain P.F, Hashizume T, McCloskey J.A, Boothroyd J.C

“…Synthesis of mRNA in kinetoplastid protozoa involves the process of trans-splicing, in which an identical 39-41-nucleotide (depending on the species) mini-exon…”
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Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNA iMet by Ushida, C., Muramatsu, T., Mizushima, H., Ueda, T., Watanabe, K., Stetter, K.O., Crain, P.F., McCloskey, J.A., Kuchino, Y.

“…Pyrodictium occultum is a hyperthermophilic archaeum that grows optimally at 105°C. To study how tRNA molecules in P occultum are thermally stabilized, we…”
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Chlorismic acid, a key metabolite in modification of tRNA. [Escherichia coli] by Hagervall, T.G., Joensson, Y.H., Bjoerk, G.R., Edmonds, C.G., McCloskey, J.A.

“…Chorismic acid is the common precursor for the biosynthesis of the three aromatic amino acids as well as for four vitamins. Mutants of Escherichia coli…”
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Structures of posttranscriptionally modified nucleosides from RNA by Limbach, P.A., Crain, P.F., Pomerantz, S.C., McCloskey, J.A.

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Structure determination of two new amino acid-containing derivatives of adenosine from tRNA of thermophilic bacteria and archaea by Reddy, Dasari M., Crain, Pamela F., Edmonds, Charles G., Gupta, Ramesh, Hashizume, Takeshi, Stetter, Karl O., Widde, Friedrich, McCloskey, James A.

“…Two new nucleosides have been identified in unfractionated transfer RNA of two thermophilic bacteria, Thermodesulfobacterium commune, and Thermotoga maritima,…”
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Dietary selenium affect methylation of the wobble nucleoside in the anticodon of selenocysteine tRNA[Ser]Sec by Diamond, A.M, Choi, I.S, Crain, P.F, Hashizume, T, Pomerantz, S.C, Cruz, R, Steer, C.J, Hill, K.E, Burk, R.F, McCloskey, J.A, Hatfield, D.L

“…We reported previously that the presence of selenium in culture media of mammalian cells influences both the steady-state levels and distributions of two tRNA…”
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Differential DNA methylation during the vegetative life cycle of Neurospora crassa by Russell, P.J, Rodland, K.D, Rachlin, E.M, McCloskey, J.A

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Analysis of mutagens from cooked foods by directly combined liquid chromatography-mass spectrometry by Edmonds, C.G, Sethi, S.K, Yamaizumi, Z, Kasai, H, Nishimura, S, McCloskey, J.A

“…Directly combined high performance liquid chromatography-mass spectrometry (LC/MS) has been studied as a method of analysis of heterocyclic aromatic mutagens…”
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Isolation and structure elucidation of an epoxide derivative of the hypermodified nucleoside queuosine from Escherichia coli transfer RNA by Phillipson, D.W., Edmonds, C.G., Crain, P.F., Smith, D.L., Davis, D.R., McCloskey, J.A.

“…A new nucleoside has been identified in tRNATyr from Escherichia coli MRE 600, where it replaces the highly modified nucleoside queuosine. The nucleoside is…”
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