Search Results - "McCarty, Reid M."
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Spectroscopic, Steady-State Kinetic, and Mechanistic Characterization of the Radical SAM Enzyme QueE, Which Catalyzes a Complex Cyclization Reaction in the Biosynthesis of 7‑Deazapurines
Published in Biochemistry (Easton) (08-01-2013)“…7-Carboxy-7-deazaguanine (CDG) synthase (QueE) catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to…”
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GenK-Catalyzed C‑6′ Methylation in the Biosynthesis of Gentamicin: Isolation and Characterization of a Cobalamin-Dependent Radical SAM Enzyme
Published in Journal of the American Chemical Society (05-06-2013)“…The existence of cobalamin (Cbl)-dependent enzymes that are members of the radical S-adenosyl-l-methionine (SAM) superfamily was previously predicted on the…”
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3
The biosynthesis of nitrogen-, sulfur-, and high-carbon chain-containing sugars
Published in Chemical Society reviews (01-01-2013)“…Carbohydrates serve many structural and functional roles in biology. While the majority of monosaccharides are characterized by the chemical composition…”
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Discovery of epoxyqueuosine (oQ) reductase reveals parallels between halorespiration and tRNA modification
Published in Proceedings of the National Academy of Sciences - PNAS (03-05-2011)“…Transfer RNA is one of the most richly modified biological molecules. Biosynthetic pathways that introduce these modifications are underexplored, largely…”
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The Deazapurine Biosynthetic Pathway Revealed: In Vitro Enzymatic Synthesis of PreQ0 from Guanosine 5′-Triphosphate in Four Steps
Published in Biochemistry (Easton) (12-05-2009)“…Deazapurine-containing secondary metabolites comprise a broad range of structurally diverse nucleoside analogues found throughout biology, including various…”
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Biochemical and Structural Studies of 6-Carboxy-5,6,7,8-tetrahydropterin Synthase Reveal the Molecular Basis of Catalytic Promiscuity within the Tunnel-fold Superfamily
Published in The Journal of biological chemistry (22-08-2014)“…6-Pyruvoyltetrahydropterin synthase (PTPS) homologs in both mammals and bacteria catalyze distinct reactions using the same 7,8-dihydroneopterin triphosphate…”
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Reaction Catalyzed by GenK, a Cobalamin-Dependent Radical S‑Adenosyl‑l‑methionine Methyltransferase in the Biosynthetic Pathway of Gentamicin, Proceeds with Retention of Configuration
Published in Journal of the American Chemical Society (15-11-2017)“…Many cobalamin (Cbl)-dependent radical S-adenosyl-l-methionine (SAM) methyltransferases have been identified through sequence alignment and/or genetic…”
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The Enzymology of Organic Transformations: A Survey of Name Reactions in Biological Systems
Published in Angewandte Chemie International Edition (20-03-2017)“…Chemical reactions that are named in honor of their true, or at least perceived, discoverers are known as “name reactions”. This Review is a collection of…”
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Biosynthesis of pyrrolopyrimidines
Published in Bioorganic chemistry (01-08-2012)“…[Display omitted] ► GTP is a precursor to all known 7-deazapurines. ► 7-Deazapurines are widely distributed in all kingdoms of life. ► Biosynthetic pathways…”
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Comparison of a PreQ1 Riboswitch Aptamer in Metabolite-bound and Free States with Implications for Gene Regulation
Published in The Journal of biological chemistry (15-07-2011)“…Riboswitches are RNA regulatory elements that govern gene expression by recognition of small molecule ligands via a high affinity aptamer domain. Molecular…”
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11
Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism
Published in Nature chemical biology (01-02-2014)“…Crystal structures of QueE, a radical SAM enzyme that converts the purine base of GTP into a deazapurine found in natural products and tRNA, explain how the…”
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7‑Carboxy-7-deazaguanine Synthase: A Radical S‑Adenosyl‑l‑methionine Enzyme with Polar Tendencies
Published in Journal of the American Chemical Society (08-02-2017)“…Radical S-adenosyl-l-methionine (SAM) enzymes are widely distributed and catalyze diverse reactions. SAM binds to the unique iron atom of a site-differentiated…”
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The deazapurine biosynthetic pathway revealed: in vitro enzymatic synthesis of PreQ(0) from guanosine 5'-triphosphate in four steps
Published in Biochemistry (Easton) (12-05-2009)“…Deazapurine-containing secondary metabolites comprise a broad range of structurally diverse nucleoside analogues found throughout biology, including various…”
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14
The Alpha Subunit of Nitrile Hydratase Is Sufficient for Catalytic Activity and Post-Translational Modification
Published in Biochemistry (Easton) (24-06-2014)“…Nitrile hydratases (NHases) possess a mononuclear iron or cobalt cofactor whose coordination environment includes rare post-translationally oxidized cysteine…”
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Escherichia coli QueD Is a 6-Carboxy-5,6,7,8-tetrahydropterin Synthase
Published in Biochemistry (Easton) (24-03-2009)“…To elucidate the early steps required during biosynthesis of a broad class of 7-deazapurine-containing natural products, we have studied the reaction catalyzed…”
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Die Enzymologie organischer Umwandlungen: Namensreaktionen in biologischen Systemen
Published in Angewandte Chemie (20-03-2017)“…Chemische Reaktionen, die zu Ehren ihrer wahren oder zumindest wahrgenommenen Entdecker benannt sind, werden als “Namensreaktionen” bezeichnet. Dieser Aufsatz…”
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Deciphering Deazapurine Biosynthesis: Pathway for Pyrrolopyrimidine Nucleosides Toyocamycin and Sangivamycin
Published in Chemistry & biology (25-08-2008)“…Pyrrolopyrimidine nucleosides analogs, collectively referred to as deazapurines, are an important class of structurally diverse compounds found in a wide…”
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Die Enzymologie organischer Umwandlungen: Namensreaktionen in biologischen Systemen
Published in Angewandte Chemie (20-03-2017)“…Chemische Reaktionen, die zu Ehren ihrer wahren oder zumindest wahrgenommenen Entdecker benannt sind, werden als “Namensreaktionen” bezeichnet. Dieser Aufsatz…”
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19
E. coli QueD is a 6-carboxy-5,6,7,8-tetrahydropterin synthase
Published in Biochemistry (Easton) (24-03-2009)“…To elucidate the early steps required during biosynthesis of a broad class of 7-deazapurine containing natural products, we have studied the reaction catalyzed…”
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20
The Deazapurine Biosynthetic Pathway Revealed: In Vitro Enzymatic Synthesis of PreQ 0 from Guanosine 5′-Triphosphate in Four Steps
Published in Biochemistry (Easton) (12-05-2009)Get full text
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