Search Results - "Matjaž Hren"

'Bois noir' phytoplasma induces significant reprogramming of the leaf transcriptome in the field grown grapevine by Hren, Matjaz, Nikolić, Petra, Rotter, Ana, Blejec, Andrej, Terrier, Nancy, Ravnikar, Maja, Dermastia, Marina, Gruden, Kristina

“…Phytoplasmas are bacteria without cell walls from the class Mollicutes. They are obligate intracellular plant pathogens which cause diseases in hundreds of…”
Get full text

Electronic lab notebooks: can they replace paper? by Kanza, Samantha, Willoughby, Cerys, Gibbins, Nicholas, Whitby, Richard, Frey, Jeremy Graham, Erjavec, Jana, Zupančič, Klemen, Hren, Matjaž, Kovač, Katarina

“…Despite the increasingly digital nature of society there are some areas of research that remain firmly rooted in the past; in this case the laboratory…”
Get full text

Analysis of Glioblastoma Patients' Plasma Revealed the Presence of MicroRNAs with a Prognostic Impact on Survival and Those of Viral Origin by Herman, Ana, Gruden, Kristina, Blejec, Andrej, Podpečan, Vid, Motaln, Helena, Rožman, Primož, Hren, Matjaž, Zupančič, Klemen, Veber, Matija, Verbovšek, Urška, Lah Turnšek, Tamara, Porčnik, Andrej, Koršič, Marjan, Knežević, Miomir, Jeras, Matjaž

“…Glioblastoma multiforme (GBM) is among the most aggressive cancers with a poor prognosis in spite of a plethora of established diagnostic and prognostic…”
Get full text

Human mesenchymal stem cells exploit the immune response mediating chemokines to impact the phenotype of glioblastoma by Motaln, Helena, Gruden, Kristina, Hren, Matjaz, Schichor, Christian, Primon, Monika, Rotter, Ana, Lah, Tamara T

“…In contrast to the application of human mesenchymal stem cells (hMSCs) in regenerative medicine, only a limited number of studies are addressing their use in…”
Get full text

Optimization of SELEX: Comparison of different methods for monitoring the progress of in vitro selection of aptamers by Mencin, Nina, Šmuc, Tina, Vraničar, Marko, Mavri, Jan, Hren, Matjaž, Galeša, Katja, Krkoč, Peter, Ulrich, Henning, Šolar, Borut

“…•Aptamer selection is often hindered due to accompanying adverse effects.•Assays are described for measuring aptamer pool complexity and binding…”
Get full text

Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: extending MapMan ontology for grapevine by Rotter, Ana, Camps, Céline, Lohse, Marc, Kappel, Christian, Pilati, Stefania, Hren, Matjaz, Stitt, Mark, Coutos-Thévenot, Pierre, Moser, Claudio, Usadel, Björn, Delrot, Serge, Gruden, Kristina

“…Whole genome transcriptomics analysis is a very powerful approach because it gives an overview of the activity of genes in certain cells or tissue types…”
Get full text

A "crossomics" study analysing variability of different components in peripheral blood of healthy caucasoid individuals by Gruden, Kristina, Hren, Matjaž, Herman, Ana, Blejec, Andrej, Albrecht, Tanja, Selbig, Joachim, Bauer, Chris, Schuchardt, Johannes, Or-Guil, Michal, Zupančič, Klemen, Svajger, Urban, Stabuc, Borut, Ihan, Alojz, Kopitar, Andreja Nataša, Ravnikar, Maja, Knežević, Miomir, Rožman, Primož, Jeras, Matjaž

“…Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their…”
Get full text

Finding differentially expressed genes in two-channel DNA microarray datasets: how to increase reliability of data preprocessing by Rotter, Ana, Hren, Matjaz, Baebler, Spela, Blejec, Andrej, Gruden, Kristina

“…Due to the great variety of preprocessing tools in two-channel expression microarray data analysis it is difficult to choose the most appropriate one for a…”
Get more information

Expression microarrays in plant-virus interaction by Gruden, Kristina, Pompe-Novak, Marusa, Baebler, Spela, Krecic-Stres, Hana, Toplak, Natasa, Hren, Matjaz, Kogovsek, Polona, Gow, Lisa, Foster, Gary D, Boonham, Neil, Ravnikar, Maja

“…Since their conception in the late 1990s, microarray techniques have become a tool of choice for monitoring pangenomic gene expression. Although there are a…”
Get more information

Yew (Taxus x media Rehd.) cell suspension cultures as a source of taxanes by Hren, Matjaž, Baebler, Špela, Camloh, Marjana, Kova, Maja, Ravnikar, Maja, Žel, Jana

“…Natural resources of paclitaxel, an effective anticancer compound, were threatened with extinction soon after the discovery of this valuable substance. Cell…”
Get full text

Enhancing Quantitative‐PCR‐based Detection of Pathogenic Enteric Viruses in Coastal Marine Environment Using Monolithic Chromatographic Supports by Balasubramanian, Mukundh N, Goncalves, Jose, Rački, Nejc, Kovač, Katarina, Hren, Matjaž, Turk, Valentina, Ravnikar, Maja, Gutiérrez‐Aguirre, Ion

“…Abstract only…”
Get full text

ESTABLISHMENT OF CELL SUSPENSION CULTURES OF YEW (TAXUS×MEDIA REHD.) AND ASSESSMENT OF THEIR GENOMIC STABILITY by BAEBLER, ŠPELA, HREN, MATJAŽ, CAMLOH, MARJANA, RAVNIKAR, MAJA, BOHANEC, BORUT, PLAPER, IGOR, UCMAN, ROBERT, ŽEL, JANA

“…Yew cell suspension culture is used as an alternative source of paclitaxel, an anti-cancer drug. To optimize the initiation protocol, highly dormant yew seeds…”
Get full text

OVARIAN INFERTILITY, STEM CELLS AND OOGENSIS IN VITRO by Irma Virant-Klun, Andrej Vogler, Jasna Šinkovec, Matjaž Hren, Kristina Gruden, Elvira Maličev, Helena Meden-Vrtovec

“…Background: In different human adult tissues and organs embryonic-like stem cells have already been found. A question is whether they are present also in the…”
Get full text

NLP-based classification of software tools for metagenomics sequencing data analysis into EDAM semantic annotation by Hiri, Kaoutar Daoud, Hren, Matjaž, Curk, Tomaž

“…Motivation: The rapid growth of metagenomics sequencing data makes metagenomics increasingly dependent on computational and statistical methods for fast and…”
Get full text

Estimating the plasma membrane permeability of Taxus x media cells with the spin probe TEMPOL by EPR by Hren, Matjaž, Žel, Jana, Baebler, Špela, Nemec, Marjana, Ravnikar, Maja, Schara, Milan

“…Production of paclitaxel and other taxanes by cell suspension cultures of Taxus species is an alternative to their extraction from yew tree bark or shoots…”
Get full text

A real-time PCR detection system for the bois noir and flavescence dorée phytoplasmas and quantification of the target DNA by Mehle, Nataša, Prezelj, Nina, Hren, Matjaž, Boben, Jana, Gruden, Kristina, Ravnikar, Maja, Dermastia, Marina

“…The real-time PCR detection system for grapevine yellows phytoplasmas described here is composed of two assays for group-specific detection of flavescence…”
Get more information

Isolation of Small SSEA-4-Positive Putative Stem Cells from the Ovarian Surface Epithelium of Adult Human Ovaries by Two Different Methods by Sinkovec, Jasna, Cvjeticanin, Branko, Gruden, Kristina, Hren, Matjaz, Skutella, Thomas, Virant-Klun, Irma, Vogler, Andrej

“…The adult ovarian surface epithelium has already been proposed as a source of stem cells and germinal cells in the literature, therefore it has been termed the…”
Get full text

Establishment of cell suspension cultures of yew (Taxus × media Rehd. and assessment of their genomic stability by Baebler, Špela, Hren, Matjaž, Camloh, Marjana, Ravnikar, Maja, Bohanec, Borut, Plaper, Igor, Ucman, Robert, Žel, Jana

Get full text

Monitoring the progress of selection during SELEX by Mencin, Nina, Šmuc, Tina, Vranicar, Marko, Mavri, Jan, Hren, Matjaz, Galeša, Katja, Krkoc, Peter, Šolar, Borut

Get full text

Analysis of Glioblastoma Patients' Plasma Revealed the Presence of MicroRNAs with a Prognostic Impact on Survival and Those of Viral Origin: e0125791 by Herman, Ana, Gruden, Kristina, Blejec, Andrej, Podpecan, Vid, Motaln, Helena, Rozman, Primoz, Hren, Matjaz, Zupancic, Klemen, Veber, Matija, Verbovsek, Urska

“…Background Glioblastoma multiforme (GBM) is among the most aggressive cancers with a poor prognosis in spite of a plethora of established diagnostic and…”
Get full text