Search Results - "Mark S. Johnson"

PAS domains in bacterial signal transduction by Stuffle, Erwin C, Johnson, Mark S, Watts, Kylie J

“…[Display omitted] •PAS domains are common sensing, signaling, dimerization, and localization domains.•Sensing versatility derives from a conserved cleft that…”
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A Prospective Investigation of Physical Health Outcomes in Abused and Neglected Children: New Findings From a 30-Year Follow-Up by SPATZ WIDOM, Cathy, CZAJA, Sally J, BENTLEY, Tyrone, JOHNSON, Mark S

“…We investigated whether abused and neglected children are at risk for negative physical health outcomes in adulthood. Using a prospective cohort design, we…”
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Structural characterization of EGFR exon 19 deletion mutation using molecular dynamics simulation by Tamirat, Mahlet Z, Koivu, Marika, Elenius, Klaus, Johnson, Mark S

“…Epidermal growth factor receptor (EGFR) is a tyrosine kinase receptor important in diverse biological processes including cell proliferation and survival…”
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Establishing a Secure, Transparent, and Autonomous Blockchain of Custody for Renewable Energy Credits and Carbon Credits by Ashley, Michael J., Johnson, Mark S.

“…To facilitate the widespread adoption of clean energy, we must devise practical economic incentives to deploy clean energy assets while reducing barriers to…”
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Two structural motifs within canonical EF-hand calcium-binding domains identify five different classes of calcium buffers and sensors by Denessiouk, Konstantin, Permyakov, Sergei, Denesyuk, Alexander, Permyakov, Eugene, Johnson, Mark S

“…Proteins with EF-hand calcium-binding motifs are essential for many cellular processes, but are also associated with cancer, autism, cardiac arrhythmias, and…”
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Distinctive structural motifs co‐ordinate the catalytic nucleophile and the residues of the oxyanion hole in the alpha/beta‐hydrolase fold enzymes by Dimitriou, Polytimi S., Denesyuk, Alexander I., Nakayama, Toru, Johnson, Mark S., Denessiouk, Konstantin

“…The alpha/beta‐hydrolases (ABH) are among the largest structural families of proteins that are found in nature. Although they vary in their sequence and…”
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Application of biochar and nitrogen influences fluxes of CO2, CH4 and N2O in a forest soil by Hawthorne, Iain, Johnson, Mark S., Jassal, Rachhpal S., Black, T. Andrew, Grant, Nicholas J., Smukler, Sean M.

“…Nitrogen (N) fertilization of forests for increasing carbon sequestration and wood volume is expected to influence soil greenhouse gas (GHG) emissions,…”
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Structural Catalytic Core of the Members of the Superfamily of Acid Proteases by Denesyuk, Alexander I, Denessiouk, Konstantin, Johnson, Mark S, Uversky, Vladimir N

“…The superfamily of acid proteases has two catalytic aspartates for proteolysis of their peptide substrates. Here, we show a minimal structural scaffold, the…”
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The acid-base-nucleophile catalytic triad in ABH-fold enzymes is coordinated by a set of structural elements by Denesyuk, Alexander, Dimitriou, Polytimi S, Johnson, Mark S, Nakayama, Toru, Denessiouk, Konstantin

“…The alpha/beta-Hydrolases (ABH) are a structural class of proteins that are found widespread in nature and includes enzymes that can catalyze various reactions…”
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Hyperspectral and Thermal Sensing of Stomatal Conductance, Transpiration, and Photosynthesis for Soybean and Maize under Drought by Sobejano-Paz, Verónica, Mikkelsen, Teis Nørgaard, Baum, Andreas, Mo, Xingguo, Liu, Suxia, Köppl, Christian Josef, Johnson, Mark S., Gulyas, Lorant, García, Mónica

“…During water stress, crops undertake adjustments in functional, structural, and biochemical traits. Hyperspectral data and machine learning techniques (PLS-R)…”
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The undetected loss of aged carbon from boreal mineral soils by Hensgens, Geert, Laudon, Hjalmar, Johnson, Mark S., Berggren, Martin

“…The boreal forest is among the largest terrestrial biomes on earth, storing more carbon (C) than the atmosphere. Due to rapid climatic warming and enhanced…”
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Land‐Atmosphere Coupling Constrains Increases to Potential Evaporation in a Warming Climate: Implications at Local and Global Scales by Kim, Yeonuk, Garcia, Monica, Johnson, Mark S.

“…The magnitude and extent of runoff reduction, drought intensification, and dryland expansion under climate change are unclear and contentious. A primary reason…”
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An extracellular receptor tyrosine kinase motif orchestrating intracellular STAT activation by Vaparanta, Katri, Jokilammi, Anne, Tamirat, Mahlet, Merilahti, Johannes A. M., Salokas, Kari, Varjosalo, Markku, Ivaska, Johanna, Johnson, Mark S., Elenius, Klaus

“…The ErbB4 receptor isoforms JM-a and JM-b differ within their extracellular juxtamembrane (eJM) domains. Here, ErbB4 isoforms are used as a model to address…”
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Active site opening and closure control translocation of multisubunit RNA polymerase by Malinen, Anssi M, Turtola, Matti, Parthiban, Marimuthu, Vainonen, Lioudmila, Johnson, Mark S, Belogurov, Georgiy A

“…Multisubunit RNA polymerase (RNAP) is the central information-processing enzyme in all cellular life forms, yet its mechanism of translocation along the DNA…”
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Accurate conformation-dependent molecular electrostatic potentials for high-throughput in silico drug discovery by Puranen, J. Santeri, Vainio, Mikko J, Johnson, Mark S

“…The atom-centered partial charges-approximation is commonly used in current molecular modeling tools as a computationally inexpensive alternative to quantum…”
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Assessing the Complementary Role of Surface Flux Equilibrium (SFE) Theory and Maximum Entropy Production (MEP) Principle in the Estimation of Actual Evapotranspiration by Kim, Yeonuk, Garcia, Monica, Black, T. Andrew, Johnson, Mark S.

“…Although evapotranspiration (ET) from the land is a key variable in Earth system models, the accurate estimation of ET based on physical principles remains…”
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Adoption of Body Mass Index Guidelines for Screening and Counseling In Pediatric Practice by Klein, Jonathan D, Sesselberg, Tracy S, Johnson, Mark S, O'Connor, Karen G, Cook, Stephen, Coon, Marian, Homer, Charles, Krebs, Nancy, Washington, Reginald

“…The purpose of this study was to examine pediatrician implementation of BMI and provider interventions for childhood overweight prevention and treatment. Data…”
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Current perspectives on the use of alternative species in human health and ecological hazard assessments by Perkins, Edward J, Ankley, Gerald T, Crofton, Kevin M, Garcia-Reyero, Natàlia, LaLone, Carlie A, Johnson, Mark S, Tietge, Joseph E, Villeneuve, Daniel L

“…Traditional animal toxicity tests can be time and resource intensive, thereby limiting the number of chemicals that can be comprehensively tested for potential…”
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SUMOylation regulates nuclear accumulation and signaling activity of the soluble intracellular domain of the ErbB4 receptor tyrosine kinase by Knittle, Anna M., Helkkula, Maria, Johnson, Mark S., Sundvall, Maria, Elenius, Klaus

“…Erb-B2 receptor tyrosine kinase 4 (ErbB4) is a kinase that can signal via a proteolytically released intracellular domain (ICD) in addition to classical…”
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CO2 efflux from Amazonian headwater streams represents a significant fate for deep soil respiration by Johnson, Mark S., Lehmann, Johannes, Riha, Susan J., Krusche, Alex V., Richey, Jeffrey E., Ometto, Jean Pierre H. B., Couto, Eduardo Guimarães

“…Large Amazonian rivers are known to emit substantial amounts of CO2 to the atmosphere, while the magnitude of CO2 degassing from small streams remains a major…”
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